RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 ZNF444Q8N0Y2 327 aaPredicted RBP13.59□□□□□ -0.23
LINC00648-204ENST00000557749 ACER1Q8TDN7 264 aa13.59□□□□□ -0.23
LINC00648-204ENST00000557749 DYNLL2Q96FJ2 89 aa13.59□□□□□ -0.23
LINC00648-204ENST00000557749 PAGR1Q9BTK6 254 aa13.59□□□□□ -0.23
LINC00648-204ENST00000557749 TANGO6Q9C0B7 1094 aa13.59□□□□□ -0.23
LINC00648-204ENST00000557749 VCPKMTQ9H867 229 aa13.59□□□□□ -0.23
LINC00648-204ENST00000557749 HELLSQ9NRZ9 838 aa13.59□□□□□ -0.23
LINC00648-204ENST00000557749 IVNS1ABPQ9Y6Y0 642 aa13.59□□□□□ -0.23
LINC00648-204ENST00000557749 MINDY4BA8MYZ0 360 aa13.58□□□□□ -0.24
LINC00648-204ENST00000557749 HIP1O00291 1037 aa13.58□□□□□ -0.24
LINC00648-204ENST00000557749 AKR1B1P15121 316 aa13.58□□□□□ -0.24
LINC00648-204ENST00000557749 GUCY1A2P33402 732 aa13.58□□□□□ -0.24
LINC00648-204ENST00000557749 COPB2P35606 906 aa13.58□□□□□ -0.24
LINC00648-204ENST00000557749 RGS2P41220 211 aa13.58□□□□□ -0.24
LINC00648-204ENST00000557749 NT5C2P49902 561 aa13.58□□□□□ -0.24
LINC00648-204ENST00000557749 MMRN1Q13201 1228 aa13.58□□□□□ -0.24
LINC00648-204ENST00000557749 SHROOM1Q2M3G4 852 aaPredicted RBP13.58□□□□□ -0.24
LINC00648-204ENST00000557749 PRPF38BQ5VTL8 546 aaKnown RBP13.58□□□□□ -0.24
LINC00648-204ENST00000557749 CHD1LQ86WJ1 897 aa13.58□□□□□ -0.24
LINC00648-204ENST00000557749 IFNL3Q8IZI9 196 aa13.58□□□□□ -0.24
LINC00648-204ENST00000557749 KRI1Q8N9T8 703 aaKnown RBP13.58□□□□□ -0.24
LINC00648-204ENST00000557749 SLC44A5Q8NCS7 719 aa13.58□□□□□ -0.24
LINC00648-204ENST00000557749 RNF208Q9H0X6 261 aa13.58□□□□□ -0.24
LINC00648-204ENST00000557749 SLC5A4Q9NY91 659 aa13.58□□□□□ -0.24
LINC00648-204ENST00000557749 ZSWIM8A7E2V4 1837 aa13.57□□□□□ -0.24
LINC00648-204ENST00000557749 HTTP42858 3142 aa13.57□□□□□ -0.24
LINC00648-204ENST00000557749 INHAP05111 366 aa13.57□□□□□ -0.24
LINC00648-204ENST00000557749 CCL5P13501 91 aa13.57□□□□□ -0.24
LINC00648-204ENST00000557749 GJA8P48165 433 aa13.57□□□□□ -0.24
LINC00648-204ENST00000557749 SLFNL1Q499Z3 407 aa13.57□□□□□ -0.24
LINC00648-204ENST00000557749 PLEKHH3Q7Z736 793 aa13.57□□□□□ -0.24
LINC00648-204ENST00000557749 OTUD7AQ8TE49 926 aaPredicted RBP13.57□□□□□ -0.24
LINC00648-204ENST00000557749 RBPJLQ9UBG7 517 aa13.57□□□□□ -0.24
LINC00648-204ENST00000557749 GABRQQ9UN88 632 aa13.57□□□□□ -0.24
LINC00648-204ENST00000557749 M0R2C6 588 aa13.56□□□□□ -0.24
LINC00648-204ENST00000557749 STRNO43815 780 aa13.56□□□□□ -0.24
LINC00648-204ENST00000557749 FLOT1O75955 427 aa13.56□□□□□ -0.24
LINC00648-204ENST00000557749 ATP2B2Q01814 1243 aa13.56□□□□□ -0.24
LINC00648-204ENST00000557749 NUCB1Q02818 461 aa13.56□□□□□ -0.24
LINC00648-204ENST00000557749 GPR142Q7Z601 462 aa13.56□□□□□ -0.24
LINC00648-204ENST00000557749 SHCBP1Q8NEM2 672 aa13.56□□□□□ -0.24
LINC00648-204ENST00000557749 APBA2Q99767 749 aa13.56□□□□□ -0.24
LINC00648-204ENST00000557749 HTATIP2Q9BUP3 242 aa13.56□□□□□ -0.24
LINC00648-204ENST00000557749 LNPKQ9C0E8 428 aa13.56□□□□□ -0.24
LINC00648-204ENST00000557749 OSBPL3Q9H4L5 887 aa13.56□□□□□ -0.24
LINC00648-204ENST00000557749 NYAP2Q9P242 653 aa13.56□□□□□ -0.24
LINC00648-204ENST00000557749 CYP2D7A0A087X1C5 515 aa13.55□□□□□ -0.24
LINC00648-204ENST00000557749 A0A1W2PRG0 241 aa13.55□□□□□ -0.24
LINC00648-204ENST00000557749 SLC15A5A6NIM6 579 aa13.55□□□□□ -0.24
LINC00648-204ENST00000557749 TSPY3P0CV98 308 aa13.55□□□□□ -0.24
LINC00648-204ENST00000557749 TSPY8P0CW00 308 aa13.55□□□□□ -0.24
LINC00648-204ENST00000557749 PCP11498 1178 aaKnown RBP13.55□□□□□ -0.24
LINC00648-204ENST00000557749 EEF2P13639 858 aaKnown RBP13.55□□□□□ -0.24
LINC00648-204ENST00000557749 ZKSCAN1P17029 563 aaPredicted RBP13.55□□□□□ -0.24
LINC00648-204ENST00000557749 EN2P19622 333 aaPredicted RBP13.55□□□□□ -0.24
LINC00648-204ENST00000557749 MCMDC2Q4G0Z9 681 aa13.55□□□□□ -0.24
LINC00648-204ENST00000557749 MROH8Q9H579 483 aa13.55□□□□□ -0.24
LINC00648-204ENST00000557749 EPB41L4AQ9HCS5 686 aaPredicted RBP13.55□□□□□ -0.24
LINC00648-204ENST00000557749 TXNRD2Q9NNW7 524 aa13.55□□□□□ -0.24
LINC00648-204ENST00000557749 HMX1Q9NP08 348 aaPredicted RBP13.55□□□□□ -0.24
LINC00648-204ENST00000557749 GJD2Q9UKL4 321 aa13.55□□□□□ -0.24
LINC00648-204ENST00000557749 SUPT16HQ9Y5B9 1047 aaKnown RBP13.55□□□□□ -0.24
LINC00648-204ENST00000557749 ZMYM6O95789 1325 aa13.55□□□□□ -0.24
LINC00648-204ENST00000557749 RPTORQ8N122 1335 aa13.55□□□□□ -0.24
LINC00648-204ENST00000557749 PLIN4Q96Q06 1357 aa13.55□□□□□ -0.24
LINC00648-204ENST00000557749 TRIM66O15016 1216 aa13.54□□□□□ -0.24
LINC00648-204ENST00000557749 SLC25A27O95847 323 aa13.54□□□□□ -0.24
LINC00648-204ENST00000557749 TTLL1O95922 423 aa13.54□□□□□ -0.24
LINC00648-204ENST00000557749 CHGBP05060 677 aa13.54□□□□□ -0.24
LINC00648-204ENST00000557749 ELNP15502 786 aa13.54□□□□□ -0.24
LINC00648-204ENST00000557749 RASA1P20936 1047 aa13.54□□□□□ -0.24
LINC00648-204ENST00000557749 PPARAQ07869 468 aa13.54□□□□□ -0.24
LINC00648-204ENST00000557749 WDR78Q5VTH9 848 aa13.54□□□□□ -0.24
LINC00648-204ENST00000557749 ABRAQ8N0Z2 381 aa13.54□□□□□ -0.24
LINC00648-204ENST00000557749 ANKLE1Q8NAG6 615 aa13.54□□□□□ -0.24
LINC00648-204ENST00000557749 EXOC6Q8TAG9 804 aa13.54□□□□□ -0.24
LINC00648-204ENST00000557749 U2AF1L4Q8WU68 220 aaKnown RBP13.54□□□□□ -0.24
LINC00648-204ENST00000557749 TMEM134Q9H6X4 195 aa13.54□□□□□ -0.24
LINC00648-204ENST00000557749 SGPL1O95470 568 aa13.53□□□□□ -0.24
LINC00648-204ENST00000557749 MYCP01106 439 aaPredicted RBP13.53□□□□□ -0.24
LINC00648-204ENST00000557749 FDX1P10109 184 aa13.53□□□□□ -0.24
LINC00648-204ENST00000557749 MTFR1Q15390 333 aa13.53□□□□□ -0.24
LINC00648-204ENST00000557749 ALX1Q15699 326 aa13.53□□□□□ -0.24
LINC00648-204ENST00000557749 MFSD14CQ5VZR4 134 aa13.53□□□□□ -0.24
LINC00648-204ENST00000557749 B4GALNT3Q6L9W6 998 aa13.53□□□□□ -0.24
LINC00648-204ENST00000557749 TMUB1Q9BVT8 246 aa13.53□□□□□ -0.24
LINC00648-204ENST00000557749 REPIN1Q9BWE0 567 aaKnown RBP13.53□□□□□ -0.24
LINC00648-204ENST00000557749 SPATC1LQ9H0A9 340 aa13.53□□□□□ -0.24
LINC00648-204ENST00000557749 PAK6Q9NQU5 681 aaPredicted RBP13.53□□□□□ -0.24
LINC00648-204ENST00000557749 DOCK3Q8IZD9 2030 aa13.52□□□□□ -0.24
LINC00648-204ENST00000557749 MSCO60682 206 aa13.52□□□□□ -0.25
LINC00648-204ENST00000557749 HOXC6P09630 235 aa13.52□□□□□ -0.25
LINC00648-204ENST00000557749 CYP2B6P20813 491 aa13.52□□□□□ -0.25
LINC00648-204ENST00000557749 DNAJB2P25686 324 aa13.52□□□□□ -0.25
LINC00648-204ENST00000557749 GRB14Q14449 540 aa13.52□□□□□ -0.25
LINC00648-204ENST00000557749 MORN1Q5T089 497 aa13.52□□□□□ -0.25
LINC00648-204ENST00000557749 SWT1Q5T5J6 900 aaKnown RBP13.52□□□□□ -0.25
LINC00648-204ENST00000557749 SPICE1Q8N0Z3 855 aa13.52□□□□□ -0.25
LINC00648-204ENST00000557749 GMCL1P1Q8NEA9 526 aa13.52□□□□□ -0.25
LINC00648-204ENST00000557749 NEDD1Q8NHV4 660 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms