RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 CPA1P15085 419 aa16.43■□□□□ 0.22
SUPT16H-208ENST00000557652 CCNA1P78396 465 aa16.43■□□□□ 0.22
SUPT16H-208ENST00000557652 CRHR2Q13324 411 aa16.43■□□□□ 0.22
SUPT16H-208ENST00000557652 TOB2Q14106 344 aaPredicted RBP16.43■□□□□ 0.22
SUPT16H-208ENST00000557652 ARHGEF6Q15052 776 aa16.43■□□□□ 0.22
SUPT16H-208ENST00000557652 TCEANC2Q96MN5 208 aa16.43■□□□□ 0.22
SUPT16H-208ENST00000557652 MAF1Q9H063 256 aa16.43■□□□□ 0.22
SUPT16H-208ENST00000557652 RBM27Q9P2N5 1060 aaKnown RBP16.43■□□□□ 0.22
SUPT16H-208ENST00000557652 MAD2L2Q9UI95 211 aa16.43■□□□□ 0.22
SUPT16H-208ENST00000557652 DOCK3Q8IZD9 2030 aa16.42■□□□□ 0.22
SUPT16H-208ENST00000557652 KLRF2D3W0D1 207 aa16.42■□□□□ 0.22
SUPT16H-208ENST00000557652 VWA5AO00534 786 aa16.42■□□□□ 0.22
SUPT16H-208ENST00000557652 ZBED4O75132 1171 aa16.42■□□□□ 0.22
SUPT16H-208ENST00000557652 TRPA1O75762 1119 aa16.42■□□□□ 0.22
SUPT16H-208ENST00000557652 BCRP11274 1271 aa16.42■□□□□ 0.22
SUPT16H-208ENST00000557652 IKQ13123 557 aaPredicted RBP16.42■□□□□ 0.22
SUPT16H-208ENST00000557652 DGKZQ13574 1117 aa16.42■□□□□ 0.22
SUPT16H-208ENST00000557652 COL9A3Q14050 684 aaPredicted RBP16.42■□□□□ 0.22
SUPT16H-208ENST00000557652 SYDE2Q5VT97 1194 aa16.42■□□□□ 0.22
SUPT16H-208ENST00000557652 C17orf99Q6UX52 265 aa16.42■□□□□ 0.22
SUPT16H-208ENST00000557652 KCTD1Q719H9 257 aa16.42■□□□□ 0.22
SUPT16H-208ENST00000557652 NUP133Q8WUM0 1156 aa16.42■□□□□ 0.22
SUPT16H-208ENST00000557652 NUP88Q99567 741 aaPredicted RBP16.42■□□□□ 0.22
SUPT16H-208ENST00000557652 SPZ1Q9BXG8 430 aa16.42■□□□□ 0.22
SUPT16H-208ENST00000557652 SLC38A10Q9HBR0 1119 aa16.42■□□□□ 0.22
SUPT16H-208ENST00000557652 SENP2Q9HC62 589 aa16.42■□□□□ 0.22
SUPT16H-208ENST00000557652 ISY1Q9ULR0 285 aaKnown RBP16.42■□□□□ 0.22
SUPT16H-208ENST00000557652 CTDP1Q9Y5B0 961 aaPredicted RBP16.42■□□□□ 0.22
SUPT16H-208ENST00000557652 ZNFX1Q9P2E3 1918 aaKnown RBP16.41■□□□□ 0.22
SUPT16H-208ENST00000557652 CYP2C8P10632 490 aa16.41■□□□□ 0.22
SUPT16H-208ENST00000557652 METAP2P50579 478 aaKnown RBP eCLIP16.41■□□□□ 0.22
SUPT16H-208ENST00000557652 RTN1Q16799 776 aa16.41■□□□□ 0.22
SUPT16H-208ENST00000557652 CPLX2Q6PUV4 134 aaKnown RBP16.41■□□□□ 0.22
SUPT16H-208ENST00000557652 MICU3Q86XE3 530 aa16.41■□□□□ 0.22
SUPT16H-208ENST00000557652 SHCBP1Q8NEM2 672 aa16.41■□□□□ 0.22
SUPT16H-208ENST00000557652 GPRC5AQ8NFJ5 357 aa16.41■□□□□ 0.22
SUPT16H-208ENST00000557652 ZSCAN31Q96LW9 406 aaPredicted RBP16.41■□□□□ 0.22
SUPT16H-208ENST00000557652 RIOX1Q9H6W3 641 aa16.41■□□□□ 0.22
SUPT16H-208ENST00000557652 GPHNQ9NQX3 736 aaPredicted RBP16.41■□□□□ 0.22
SUPT16H-208ENST00000557652 SH2B1Q9NRF2 756 aaPredicted RBP16.41■□□□□ 0.22
SUPT16H-208ENST00000557652 BRPF3Q9ULD4 1205 aa16.41■□□□□ 0.22
SUPT16H-208ENST00000557652 PRR12Q9ULL5 1215 aa16.41■□□□□ 0.22
SUPT16H-208ENST00000557652 CEP350Q5VT06 3117 aa16.41■□□□□ 0.22
SUPT16H-208ENST00000557652 GOLGA8AA7E2F4 631 aa16.4■□□□□ 0.22
SUPT16H-208ENST00000557652 GOLGA8BA8MQT2 603 aa16.4■□□□□ 0.22
SUPT16H-208ENST00000557652 SLC25A27O95847 323 aa16.4■□□□□ 0.22
SUPT16H-208ENST00000557652 GNRH1P01148 92 aa16.4■□□□□ 0.22
SUPT16H-208ENST00000557652 PDIA3P30101 505 aaKnown RBP16.4■□□□□ 0.22
SUPT16H-208ENST00000557652 AK2P54819 239 aa16.4■□□□□ 0.22
SUPT16H-208ENST00000557652 APOBRQ0VD83 1088 aa16.4■□□□□ 0.22
SUPT16H-208ENST00000557652 TKFCQ3LXA3 575 aa16.4■□□□□ 0.22
SUPT16H-208ENST00000557652 TEX2Q8IWB9 1127 aa16.4■□□□□ 0.22
SUPT16H-208ENST00000557652 ATG4CQ96DT6 458 aa16.4■□□□□ 0.22
SUPT16H-208ENST00000557652 TEX13BQ9BXU2 312 aa16.4■□□□□ 0.22
SUPT16H-208ENST00000557652 RANBP17Q9H2T7 1088 aaKnown RBP16.4■□□□□ 0.22
SUPT16H-208ENST00000557652 GPCPD1Q9NPB8 672 aa16.4■□□□□ 0.22
SUPT16H-208ENST00000557652 FBXO28Q9NVF7 368 aa16.4■□□□□ 0.22
SUPT16H-208ENST00000557652 LIMCH1Q9UPQ0 1083 aa16.4■□□□□ 0.22
SUPT16H-208ENST00000557652 MTMR7Q9Y216 660 aa16.4■□□□□ 0.22
SUPT16H-208ENST00000557652 CASP8AP2Q9UKL3 1982 aa16.4■□□□□ 0.22
SUPT16H-208ENST00000557652 CDKL5O76039 1030 aa16.39■□□□□ 0.21
SUPT16H-208ENST00000557652 CTCFP49711 727 aaPredicted RBP16.39■□□□□ 0.21
SUPT16H-208ENST00000557652 ERVK-9P63128 1117 aa16.39■□□□□ 0.21
SUPT16H-208ENST00000557652 ERVK-24P63145 666 aa16.39■□□□□ 0.21
SUPT16H-208ENST00000557652 KIF22Q14807 665 aa16.39■□□□□ 0.21
SUPT16H-208ENST00000557652 TMTC3Q6ZXV5 915 aa16.39■□□□□ 0.21
SUPT16H-208ENST00000557652 KIFC2Q96AC6 838 aa16.39■□□□□ 0.21
SUPT16H-208ENST00000557652 MTMR8Q96EF0 704 aa16.39■□□□□ 0.21
SUPT16H-208ENST00000557652 RBPJLQ9UBG7 517 aa16.39■□□□□ 0.21
SUPT16H-208ENST00000557652 FRMPD2Q68DX3 1309 aaPredicted RBP16.39■□□□□ 0.21
SUPT16H-208ENST00000557652 SMCHD1A6NHR9 2005 aa16.38■□□□□ 0.21
SUPT16H-208ENST00000557652 hCG_1984214I3L0E3 225 aa16.38■□□□□ 0.21
SUPT16H-208ENST00000557652 GPR25O00155 361 aa16.38■□□□□ 0.21
SUPT16H-208ENST00000557652 PFKFB2O60825 505 aa16.38■□□□□ 0.21
SUPT16H-208ENST00000557652 ICAM1P05362 532 aa16.38■□□□□ 0.21
SUPT16H-208ENST00000557652 MAPK4P31152 587 aa16.38■□□□□ 0.21
SUPT16H-208ENST00000557652 SP3Q02447 781 aa16.38■□□□□ 0.21
SUPT16H-208ENST00000557652 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.38■□□□□ 0.21
SUPT16H-208ENST00000557652 RIOX2Q8IUF8 465 aa16.38■□□□□ 0.21
SUPT16H-208ENST00000557652 FAM177A1Q8N128 213 aaPredicted RBP16.38■□□□□ 0.21
SUPT16H-208ENST00000557652 ZNF713Q8N859 430 aaPredicted RBP16.38■□□□□ 0.21
SUPT16H-208ENST00000557652 REPS2Q8NFH8 660 aa16.38■□□□□ 0.21
SUPT16H-208ENST00000557652 ERO1AQ96HE7 468 aa16.38■□□□□ 0.21
SUPT16H-208ENST00000557652 SPATC1LQ9H0A9 340 aa16.38■□□□□ 0.21
SUPT16H-208ENST00000557652 SLKQ9H2G2 1235 aaPredicted RBP16.38■□□□□ 0.21
SUPT16H-208ENST00000557652 MROH8Q9H579 483 aa16.38■□□□□ 0.21
SUPT16H-208ENST00000557652 FBXO40Q9UH90 709 aa16.38■□□□□ 0.21
SUPT16H-208ENST00000557652 HPS5Q9UPZ3 1129 aa16.38■□□□□ 0.21
SUPT16H-208ENST00000557652 ZNF236Q9UL36 1845 aa16.38■□□□□ 0.21
SUPT16H-208ENST00000557652 RBBP6Q7Z6E9 1792 aaKnown RBP16.37■□□□□ 0.21
SUPT16H-208ENST00000557652 FKTNO75072 461 aa16.37■□□□□ 0.21
SUPT16H-208ENST00000557652 TBC1D8O95759 1140 aa16.37■□□□□ 0.21
SUPT16H-208ENST00000557652 GOLGA8HP0CJ92 632 aa16.37■□□□□ 0.21
SUPT16H-208ENST00000557652 STAT3P40763 770 aa16.37■□□□□ 0.21
SUPT16H-208ENST00000557652 TTBK2Q6IQ55 1244 aa16.37■□□□□ 0.21
SUPT16H-208ENST00000557652 ADGRF4Q8IZF3 695 aa16.37■□□□□ 0.21
SUPT16H-208ENST00000557652 STAG2Q8N3U4 1231 aa16.37■□□□□ 0.21
SUPT16H-208ENST00000557652 SAMD3Q8N6K7 520 aa16.37■□□□□ 0.21
SUPT16H-208ENST00000557652 ANKRD13CQ8N6S4 541 aa16.37■□□□□ 0.21
SUPT16H-208ENST00000557652 RRP36Q96EU6 259 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms