RNA–Protein interactions for RNA: ENST00000557424.1

HMGB1P14-201, Transcript of high mobility group box 1 pseudogene 14, humanhuman

BASIC

Gene HMGB1P14, Length 591 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P14-201ENST00000557424 DYNC1LI2O43237 492 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P14-201ENST00000557424 PPM1BO75688 479 aa4.28□□□□□ -1.72
HMGB1P14-201ENST00000557424 EOMESO95936 686 aa4.28□□□□□ -1.72
HMGB1P14-201ENST00000557424 PRNPP04156 253 aa4.28□□□□□ -1.72
HMGB1P14-201ENST00000557424 POU3F3P20264 500 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P14-201ENST00000557424 TBX4P57082 545 aa4.28□□□□□ -1.72
HMGB1P14-201ENST00000557424 GNPTABQ3T906 1256 aa4.28□□□□□ -1.72
HMGB1P14-201ENST00000557424 TAF7LQ5H9L4 462 aa4.28□□□□□ -1.72
HMGB1P14-201ENST00000557424 ZMYM1Q5SVZ6 1142 aa4.28□□□□□ -1.72
HMGB1P14-201ENST00000557424 ODR4Q5SWX8 454 aa4.28□□□□□ -1.72
HMGB1P14-201ENST00000557424 NOL9Q5SY16 702 aaKnown RBP4.28□□□□□ -1.72
HMGB1P14-201ENST00000557424 HEATR6Q6AI08 1181 aaKnown RBP4.28□□□□□ -1.72
HMGB1P14-201ENST00000557424 VHLLQ6RSH7 139 aa4.28□□□□□ -1.72
HMGB1P14-201ENST00000557424 TTC6Q86TZ1 520 aa4.28□□□□□ -1.72
HMGB1P14-201ENST00000557424 ZNF655Q8N720 491 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P14-201ENST00000557424 MORC4Q8TE76 937 aa4.28□□□□□ -1.72
HMGB1P14-201ENST00000557424 APPBP2Q92624 585 aa4.28□□□□□ -1.72
HMGB1P14-201ENST00000557424 ZNF669Q96BR6 464 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P14-201ENST00000557424 SGSM3Q96HU1 749 aa4.28□□□□□ -1.72
HMGB1P14-201ENST00000557424 DSCC1Q9BVC3 393 aa4.28□□□□□ -1.72
HMGB1P14-201ENST00000557424 GPR62Q9BZJ7 368 aa4.28□□□□□ -1.72
HMGB1P14-201ENST00000557424 WHRNQ9P202 907 aa4.28□□□□□ -1.72
HMGB1P14-201ENST00000557424 MSRB2Q9Y3D2 182 aa4.28□□□□□ -1.72
HMGB1P14-201ENST00000557424 PRKAB1Q9Y478 270 aa4.28□□□□□ -1.72
HMGB1P14-201ENST00000557424 A0A087WZG4 1122 aa4.27□□□□□ -1.73
HMGB1P14-201ENST00000557424 ANKRD34BA5PLL1 514 aa4.27□□□□□ -1.73
HMGB1P14-201ENST00000557424 NOP56O00567 594 aaKnown RBP4.27□□□□□ -1.73
HMGB1P14-201ENST00000557424 CBX7O95931 251 aa4.27□□□□□ -1.73
HMGB1P14-201ENST00000557424 WNT11O96014 354 aa4.27□□□□□ -1.73
HMGB1P14-201ENST00000557424 TGFB1P01137 390 aa4.27□□□□□ -1.73
HMGB1P14-201ENST00000557424 LTKP29376 864 aa4.27□□□□□ -1.73
HMGB1P14-201ENST00000557424 ADMP35318 185 aa4.27□□□□□ -1.73
HMGB1P14-201ENST00000557424 NOP2P46087 812 aaKnown RBP4.27□□□□□ -1.73
HMGB1P14-201ENST00000557424 CD97P48960 835 aa4.27□□□□□ -1.73
HMGB1P14-201ENST00000557424 OXCT1P55809 520 aa4.27□□□□□ -1.73
HMGB1P14-201ENST00000557424 RHBDL3P58872 404 aa4.27□□□□□ -1.73
HMGB1P14-201ENST00000557424 DUSP4Q13115 394 aa4.27□□□□□ -1.73
HMGB1P14-201ENST00000557424 NMIQ13287 307 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P14-201ENST00000557424 ANKRD39Q53RE8 183 aa4.27□□□□□ -1.73
HMGB1P14-201ENST00000557424 UNC5AQ6ZN44 842 aa4.27□□□□□ -1.73
HMGB1P14-201ENST00000557424 RNF111Q6ZNA4 994 aa4.27□□□□□ -1.73
HMGB1P14-201ENST00000557424 NBPF11Q86T75 865 aa4.27□□□□□ -1.73
HMGB1P14-201ENST00000557424 CDH24Q86UP0 819 aa4.27□□□□□ -1.73
HMGB1P14-201ENST00000557424 TICAM2Q86XR7 235 aa4.27□□□□□ -1.73
HMGB1P14-201ENST00000557424 DTX1Q86Y01 620 aa4.27□□□□□ -1.73
HMGB1P14-201ENST00000557424 PRPF38AQ8NAV1 312 aaKnown RBP4.27□□□□□ -1.73
HMGB1P14-201ENST00000557424 DTWD2Q8NBA8 298 aa4.27□□□□□ -1.73
HMGB1P14-201ENST00000557424 FLCNQ8NFG4 579 aa4.27□□□□□ -1.73
HMGB1P14-201ENST00000557424 SYTL5Q8TDW5 730 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P14-201ENST00000557424 TNKS2Q9H2K2 1166 aa4.27□□□□□ -1.73
HMGB1P14-201ENST00000557424 TMEM260Q9NX78 707 aa4.27□□□□□ -1.73
HMGB1P14-201ENST00000557424 LMCD1Q9NZU5 365 aa4.27□□□□□ -1.73
HMGB1P14-201ENST00000557424 FBXL21Q9UKT6 434 aa4.27□□□□□ -1.73
HMGB1P14-201ENST00000557424 ZNF214Q9UL59 606 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P14-201ENST00000557424 CAPN6Q9Y6Q1 641 aa4.27□□□□□ -1.73
HMGB1P14-201ENST00000557424 TRBV23OR9-2A0A075B6M9 112 aa4.26□□□□□ -1.73
HMGB1P14-201ENST00000557424 UPK3BL1B0FP48 263 aa4.26□□□□□ -1.73
HMGB1P14-201ENST00000557424 UPK3BL2E5RIL1 263 aa4.26□□□□□ -1.73
HMGB1P14-201ENST00000557424 SIGLEC6O43699 453 aa4.26□□□□□ -1.73
HMGB1P14-201ENST00000557424 DIAPH1O60610 1272 aaKnown RBP4.26□□□□□ -1.73
HMGB1P14-201ENST00000557424 LEFTY1O75610 366 aa4.26□□□□□ -1.73
HMGB1P14-201ENST00000557424 GSNP06396 782 aa4.26□□□□□ -1.73
HMGB1P14-201ENST00000557424 PCBP3P57721 371 aaKnown RBP4.26□□□□□ -1.73
HMGB1P14-201ENST00000557424 IFRD2Q12894 506 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P14-201ENST00000557424 IKZF1Q13422 519 aa4.26□□□□□ -1.73
HMGB1P14-201ENST00000557424 LARP1BQ659C4 914 aaKnown RBP4.26□□□□□ -1.73
HMGB1P14-201ENST00000557424 FERMT3Q86UX7 667 aa4.26□□□□□ -1.73
HMGB1P14-201ENST00000557424 HOMER1Q86YM7 354 aa4.26□□□□□ -1.73
HMGB1P14-201ENST00000557424 C7orf61Q8IZ16 206 aa4.26□□□□□ -1.73
HMGB1P14-201ENST00000557424 DAGLBQ8NCG7 672 aa4.26□□□□□ -1.73
HMGB1P14-201ENST00000557424 BAHD1Q8TBE0 780 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P14-201ENST00000557424 IPO9Q96P70 1041 aaKnown RBP4.26□□□□□ -1.73
HMGB1P14-201ENST00000557424 SLC9A7Q96T83 725 aa4.26□□□□□ -1.73
HMGB1P14-201ENST00000557424 APBA2Q99767 749 aa4.26□□□□□ -1.73
HMGB1P14-201ENST00000557424 DIS3Q9Y2L1 958 aaKnown RBP4.26□□□□□ -1.73
HMGB1P14-201ENST00000557424 FHOD1Q9Y613 1164 aa4.26□□□□□ -1.73
HMGB1P14-201ENST00000557424 A0A1W2PQH9 124 aa4.25□□□□□ -1.73
HMGB1P14-201ENST00000557424 PRR19A6NJB7 356 aa4.25□□□□□ -1.73
HMGB1P14-201ENST00000557424 BIN1O00499 593 aa4.25□□□□□ -1.73
HMGB1P14-201ENST00000557424 DDAH1O94760 285 aa4.25□□□□□ -1.73
HMGB1P14-201ENST00000557424 UBOX5O94941 541 aa4.25□□□□□ -1.73
HMGB1P14-201ENST00000557424 RAC2P15153 192 aa4.25□□□□□ -1.73
HMGB1P14-201ENST00000557424 PDE6BP35913 854 aa4.25□□□□□ -1.73
HMGB1P14-201ENST00000557424 POU4F1Q01851 419 aa4.25□□□□□ -1.73
HMGB1P14-201ENST00000557424 GRB10Q13322 594 aa4.25□□□□□ -1.73
HMGB1P14-201ENST00000557424 AUHQ13825 339 aaKnown RBP4.25□□□□□ -1.73
HMGB1P14-201ENST00000557424 LRRC41Q15345 812 aa4.25□□□□□ -1.73
HMGB1P14-201ENST00000557424 DDR2Q16832 855 aa4.25□□□□□ -1.73
HMGB1P14-201ENST00000557424 AOC3Q16853 763 aa4.25□□□□□ -1.73
HMGB1P14-201ENST00000557424 MSMPQ1L6U9 139 aa4.25□□□□□ -1.73
HMGB1P14-201ENST00000557424 BRDTQ58F21 947 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P14-201ENST00000557424 DALRD3Q5D0E6 543 aaKnown RBP4.25□□□□□ -1.73
HMGB1P14-201ENST00000557424 ZC3H12BQ5HYM0 836 aaKnown RBP4.25□□□□□ -1.73
HMGB1P14-201ENST00000557424 UBE3DQ7Z6J8 389 aa4.25□□□□□ -1.73
HMGB1P14-201ENST00000557424 SPACA3Q8IXA5 215 aa4.25□□□□□ -1.73
HMGB1P14-201ENST00000557424 LRRC47Q8N1G4 583 aaKnown RBP4.25□□□□□ -1.73
HMGB1P14-201ENST00000557424 ST13P5Q8NFI4 369 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P14-201ENST00000557424 PPP1R13LQ8WUF5 828 aa4.25□□□□□ -1.73
HMGB1P14-201ENST00000557424 HAUS7Q99871 368 aa4.25□□□□□ -1.73
HMGB1P14-201ENST00000557424 CCDC113Q9H0I3 377 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms