RNA–Protein interactions for RNA: ENST00000557394.5

SUPT16H-207, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 2,324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-207ENST00000557394 PHC3Q8NDX5 983 aa11.7□□□□□ -0.54
SUPT16H-207ENST00000557394 SREK1Q8WXA9 508 aaKnown RBP11.7□□□□□ -0.54
SUPT16H-207ENST00000557394 ARL8AQ96BM9 186 aa11.7□□□□□ -0.54
SUPT16H-207ENST00000557394 KLF15Q9UIH9 416 aa11.7□□□□□ -0.54
SUPT16H-207ENST00000557394 FAM163BP0C2L3 166 aa11.69□□□□□ -0.54
SUPT16H-207ENST00000557394 LSP1P33241 339 aa11.69□□□□□ -0.54
SUPT16H-207ENST00000557394 SARNPP82979 210 aaKnown RBP11.69□□□□□ -0.54
SUPT16H-207ENST00000557394 TRIM14Q14142 442 aa11.69□□□□□ -0.54
SUPT16H-207ENST00000557394 SNCBQ16143 134 aa11.69□□□□□ -0.54
SUPT16H-207ENST00000557394 ZMYM1Q5SVZ6 1142 aa11.69□□□□□ -0.54
SUPT16H-207ENST00000557394 TTC19Q6DKK2 380 aaPredicted RBP11.69□□□□□ -0.54
SUPT16H-207ENST00000557394 SND1Q7KZF4 910 aaKnown RBP eCLIP11.69□□□□□ -0.54
SUPT16H-207ENST00000557394 ZNF572Q7Z3I7 529 aaPredicted RBP11.69□□□□□ -0.54
SUPT16H-207ENST00000557394 KRI1Q8N9T8 703 aaKnown RBP11.69□□□□□ -0.54
SUPT16H-207ENST00000557394 RBM46Q8TBY0 533 aaKnown RBP11.69□□□□□ -0.54
SUPT16H-207ENST00000557394 ZNF473Q8WTR7 871 aaKnown RBP11.69□□□□□ -0.54
SUPT16H-207ENST00000557394 SLF1Q9BQI6 1058 aa11.69□□□□□ -0.54
SUPT16H-207ENST00000557394 ACTR5Q9H9F9 607 aaPredicted RBP11.69□□□□□ -0.54
SUPT16H-207ENST00000557394 JADE2Q9NQC1 790 aa11.69□□□□□ -0.54
SUPT16H-207ENST00000557394 CHCHD3Q9NX63 227 aaKnown RBP11.69□□□□□ -0.54
SUPT16H-207ENST00000557394 NDUFB9Q9Y6M9 179 aa11.69□□□□□ -0.54
SUPT16H-207ENST00000557394 RGPD5Q99666 1765 aa11.69□□□□□ -0.54
SUPT16H-207ENST00000557394 KLF18A0A0U1RQI7 1052 aa11.69□□□□□ -0.54
SUPT16H-207ENST00000557394 GOLGA8BA8MQT2 603 aa11.69□□□□□ -0.54
SUPT16H-207ENST00000557394 NEFHP12036 1026 aa11.69□□□□□ -0.54
SUPT16H-207ENST00000557394 SLC8A3P57103 927 aa11.69□□□□□ -0.54
SUPT16H-207ENST00000557394 ITIH3Q06033 890 aa11.69□□□□□ -0.54
SUPT16H-207ENST00000557394 C4orf46Q504U0 113 aa11.69□□□□□ -0.54
SUPT16H-207ENST00000557394 PARP9Q8IXQ6 854 aa11.69□□□□□ -0.54
SUPT16H-207ENST00000557394 MAB21L3Q8N8X9 362 aa11.69□□□□□ -0.54
SUPT16H-207ENST00000557394 CABLES1Q8TDN4 633 aa11.69□□□□□ -0.54
SUPT16H-207ENST00000557394 AGBL1Q96MI9 1066 aa11.69□□□□□ -0.54
SUPT16H-207ENST00000557394 RSPH9Q9H1X1 276 aaPredicted RBP11.69□□□□□ -0.54
SUPT16H-207ENST00000557394 COPRSQ9NQ92 184 aa11.69□□□□□ -0.54
SUPT16H-207ENST00000557394 TRIM10Q9UDY6 481 aa11.69□□□□□ -0.54
SUPT16H-207ENST00000557394 BCL9LQ86UU0 1499 aa11.68□□□□□ -0.54
SUPT16H-207ENST00000557394 ANO9A1A5B4 782 aa11.68□□□□□ -0.54
SUPT16H-207ENST00000557394 LRRC10BA6NIK2 292 aa11.68□□□□□ -0.54
SUPT16H-207ENST00000557394 PDE2AO00408 941 aaPredicted RBP11.68□□□□□ -0.54
SUPT16H-207ENST00000557394 ENC1O14682 589 aa11.68□□□□□ -0.54
SUPT16H-207ENST00000557394 SRGAP2O75044 1071 aa11.68□□□□□ -0.54
SUPT16H-207ENST00000557394 NDUFA10O95299 355 aa11.68□□□□□ -0.54
SUPT16H-207ENST00000557394 PEX19P40855 299 aa11.68□□□□□ -0.54
SUPT16H-207ENST00000557394 CLNS1AP54105 237 aaKnown RBP11.68□□□□□ -0.54
SUPT16H-207ENST00000557394 ATP2B2Q01814 1243 aa11.68□□□□□ -0.54
SUPT16H-207ENST00000557394 CAVIN3Q969G5 261 aa11.68□□□□□ -0.54
SUPT16H-207ENST00000557394 RRP36Q96EU6 259 aaKnown RBP11.68□□□□□ -0.54
SUPT16H-207ENST00000557394 SERTAD1Q9UHV2 236 aa11.68□□□□□ -0.54
SUPT16H-207ENST00000557394 GUCA1BQ9UMX6 200 aa11.68□□□□□ -0.54
SUPT16H-207ENST00000557394 EPN1Q9Y6I3 576 aaPredicted RBP11.68□□□□□ -0.54
SUPT16H-207ENST00000557394 RNF225M0QZC1 329 aaPredicted RBP11.68□□□□□ -0.54
SUPT16H-207ENST00000557394 CPLX1O14810 134 aa11.68□□□□□ -0.54
SUPT16H-207ENST00000557394 ACTN4O43707 911 aaKnown RBP11.68□□□□□ -0.54
SUPT16H-207ENST00000557394 EZRP15311 586 aaKnown RBP11.68□□□□□ -0.54
SUPT16H-207ENST00000557394 TNFRSF8P28908 595 aa11.68□□□□□ -0.54
SUPT16H-207ENST00000557394 ICA1Q05084 483 aa11.68□□□□□ -0.54
SUPT16H-207ENST00000557394 PTGISQ16647 500 aa11.68□□□□□ -0.54
SUPT16H-207ENST00000557394 KRT40Q6A162 431 aa11.68□□□□□ -0.54
SUPT16H-207ENST00000557394 IQCEQ6IPM2 695 aa11.68□□□□□ -0.54
SUPT16H-207ENST00000557394 RCSD1Q6JBY9 416 aa11.68□□□□□ -0.54
SUPT16H-207ENST00000557394 KANK3Q6NY19 840 aa11.68□□□□□ -0.54
SUPT16H-207ENST00000557394 EMBQ6PCB8 327 aa11.68□□□□□ -0.54
SUPT16H-207ENST00000557394 STK11IPQ8N1F8 1099 aa11.68□□□□□ -0.54
SUPT16H-207ENST00000557394 TSEN2Q8NCE0 465 aaKnown RBP11.68□□□□□ -0.54
SUPT16H-207ENST00000557394 KLHDC4Q8TBB5 520 aa11.68□□□□□ -0.54
SUPT16H-207ENST00000557394 JAKMIP2Q96AA8 810 aa11.68□□□□□ -0.54
SUPT16H-207ENST00000557394 SH2B2O14492 632 aaPredicted RBP11.67□□□□□ -0.54
SUPT16H-207ENST00000557394 PTPREP23469 700 aa11.67□□□□□ -0.54
SUPT16H-207ENST00000557394 ABL2P42684 1182 aa11.67□□□□□ -0.54
SUPT16H-207ENST00000557394 CDR1P51861 262 aa11.67□□□□□ -0.54
SUPT16H-207ENST00000557394 CCNHP51946 323 aaPredicted RBP11.67□□□□□ -0.54
SUPT16H-207ENST00000557394 EPHB4P54760 987 aa11.67□□□□□ -0.54
SUPT16H-207ENST00000557394 ZC3H6P61129 1189 aaKnown RBP11.67□□□□□ -0.54
SUPT16H-207ENST00000557394 CCDC15Q0P6D6 951 aa11.67□□□□□ -0.54
SUPT16H-207ENST00000557394 NNTQ13423 1086 aa11.67□□□□□ -0.54
SUPT16H-207ENST00000557394 CYB5D1Q6P9G0 228 aa11.67□□□□□ -0.54
SUPT16H-207ENST00000557394 MB21D2Q8IYB1 491 aaPredicted RBP11.67□□□□□ -0.54
SUPT16H-207ENST00000557394 FUKQ8N0W3 1084 aa11.67□□□□□ -0.54
SUPT16H-207ENST00000557394 MYCBPAPQ8TBZ2 947 aa11.67□□□□□ -0.54
SUPT16H-207ENST00000557394 ZNF483Q8TF39 744 aaPredicted RBP11.67□□□□□ -0.54
SUPT16H-207ENST00000557394 ALG1Q9BT22 464 aa11.67□□□□□ -0.54
SUPT16H-207ENST00000557394 GOPCQ9HD26 462 aa11.67□□□□□ -0.54
SUPT16H-207ENST00000557394 SEC31BQ9NQW1 1179 aa11.67□□□□□ -0.54
SUPT16H-207ENST00000557394 LIMA1Q9UHB6 759 aaKnown RBP11.67□□□□□ -0.54
SUPT16H-207ENST00000557394 WDR19Q8NEZ3 1342 aa11.67□□□□□ -0.54
SUPT16H-207ENST00000557394 POLR2DO15514 142 aaKnown RBP11.66□□□□□ -0.54
SUPT16H-207ENST00000557394 PPP1R37O75864 691 aa11.66□□□□□ -0.54
SUPT16H-207ENST00000557394 FAM107AO95990 144 aa11.66□□□□□ -0.54
SUPT16H-207ENST00000557394 PDHBP11177 359 aa11.66□□□□□ -0.54
SUPT16H-207ENST00000557394 SLC8A1P32418 973 aa11.66□□□□□ -0.54
SUPT16H-207ENST00000557394 HDLBPQ00341 1268 aaKnown RBP11.66□□□□□ -0.54
SUPT16H-207ENST00000557394 APBA1Q02410 837 aa11.66□□□□□ -0.54
SUPT16H-207ENST00000557394 RNF187Q5TA31 235 aaPredicted RBP11.66□□□□□ -0.54
SUPT16H-207ENST00000557394 ZNF579Q8NAF0 562 aaKnown RBP11.66□□□□□ -0.54
SUPT16H-207ENST00000557394 EHBP1Q8NDI1 1231 aa11.66□□□□□ -0.54
SUPT16H-207ENST00000557394 TATDN2Q93075 761 aa11.66□□□□□ -0.54
SUPT16H-207ENST00000557394 RNPC3Q96LT9 517 aaKnown RBP11.66□□□□□ -0.54
SUPT16H-207ENST00000557394 SEZ6LQ9BYH1 1024 aa11.66□□□□□ -0.54
SUPT16H-207ENST00000557394 FBXO2Q9UK22 296 aaPredicted RBP11.66□□□□□ -0.54
SUPT16H-207ENST00000557394 LMO7Q8WWI1 1683 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms