RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 RHOXF2Q9BQY4 288 aa17.26■□□□□ 0.35
TMEM55B-207ENST00000557041 MMRN2Q9H8L6 949 aa17.26■□□□□ 0.35
TMEM55B-207ENST00000557041 RMND1Q9NWS8 449 aa17.26■□□□□ 0.35
TMEM55B-207ENST00000557041 USH1GQ495M9 461 aa17.26■□□□□ 0.35
TMEM55B-207ENST00000557041 SIPA1L3O60292 1781 aaPredicted RBP17.25■□□□□ 0.35
TMEM55B-207ENST00000557041 SHISA4Q96DD7 197 aa17.25■□□□□ 0.35
TMEM55B-207ENST00000557041 CAPZA3Q96KX2 299 aa17.25■□□□□ 0.35
TMEM55B-207ENST00000557041 GSDMAQ96QA5 445 aa17.25■□□□□ 0.35
TMEM55B-207ENST00000557041 ANAPC4Q9UJX5 808 aa17.25■□□□□ 0.35
TMEM55B-207ENST00000557041 CLSTN1O94985 981 aa17.25■□□□□ 0.35
TMEM55B-207ENST00000557041 TBC1D8BQ0IIM8 1120 aa17.25■□□□□ 0.35
TMEM55B-207ENST00000557041 VPS72Q15906 364 aa17.25■□□□□ 0.35
TMEM55B-207ENST00000557041 ZYXQ15942 572 aaKnown RBP17.25■□□□□ 0.35
TMEM55B-207ENST00000557041 FBXO38Q6PIJ6 1188 aa17.25■□□□□ 0.35
TMEM55B-207ENST00000557041 WDR24Q96S15 920 aa17.25■□□□□ 0.35
TMEM55B-207ENST00000557041 ORC4O43929 436 aa17.24■□□□□ 0.35
TMEM55B-207ENST00000557041 PRCPP42785 496 aa17.24■□□□□ 0.35
TMEM55B-207ENST00000557041 CACNB1Q02641 598 aaPredicted RBP17.24■□□□□ 0.35
TMEM55B-207ENST00000557041 TMEM266Q2M3C6 531 aa17.24■□□□□ 0.35
TMEM55B-207ENST00000557041 LRWD1Q9UFC0 647 aa17.24■□□□□ 0.35
TMEM55B-207ENST00000557041 AFF2P51816 1311 aa17.24■□□□□ 0.35
TMEM55B-207ENST00000557041 PLCG2P16885 1265 aa17.24■□□□□ 0.35
TMEM55B-207ENST00000557041 EPS15P42566 896 aa17.24■□□□□ 0.35
TMEM55B-207ENST00000557041 DGKHQ86XP1 1220 aa17.24■□□□□ 0.35
TMEM55B-207ENST00000557041 ZNF397Q8NF99 534 aaPredicted RBP17.24■□□□□ 0.35
TMEM55B-207ENST00000557041 GJD4Q96KN9 370 aaPredicted RBP17.24■□□□□ 0.35
TMEM55B-207ENST00000557041 LRRC4BQ9NT99 713 aa17.24■□□□□ 0.35
TMEM55B-207ENST00000557041 HLA-DOAP06340 250 aa17.24■□□□□ 0.35
TMEM55B-207ENST00000557041 KRT31Q15323 416 aa17.24■□□□□ 0.35
TMEM55B-207ENST00000557041 LRRC41Q15345 812 aa17.24■□□□□ 0.35
TMEM55B-207ENST00000557041 PARP4Q9UKK3 1724 aaKnown RBP17.24■□□□□ 0.35
TMEM55B-207ENST00000557041 EP400Q96L91 3159 aa17.24■□□□□ 0.35
TMEM55B-207ENST00000557041 SEC31AO94979 1220 aaKnown RBP17.23■□□□□ 0.35
TMEM55B-207ENST00000557041 PLCG1P19174 1290 aa17.23■□□□□ 0.35
TMEM55B-207ENST00000557041 ZNF76P36508 570 aa17.23■□□□□ 0.35
TMEM55B-207ENST00000557041 ATP2C1P98194 919 aaPredicted RBP17.23■□□□□ 0.35
TMEM55B-207ENST00000557041 RCSD1Q6JBY9 416 aa17.23■□□□□ 0.35
TMEM55B-207ENST00000557041 TRIML1Q8N9V2 468 aa17.23■□□□□ 0.35
TMEM55B-207ENST00000557041 ZNF579Q8NAF0 562 aaKnown RBP17.23■□□□□ 0.35
TMEM55B-207ENST00000557041 PSMB7Q99436 277 aa17.23■□□□□ 0.35
TMEM55B-207ENST00000557041 LUC7L2Q9Y383 392 aaKnown RBP17.23■□□□□ 0.35
TMEM55B-207ENST00000557041 PSDA5PKW4 1024 aaPredicted RBP17.23■□□□□ 0.35
TMEM55B-207ENST00000557041 PCP11498 1178 aaKnown RBP17.23■□□□□ 0.35
TMEM55B-207ENST00000557041 RASA1P20936 1047 aa17.23■□□□□ 0.35
TMEM55B-207ENST00000557041 ATP2B4P23634 1241 aa17.23■□□□□ 0.35
TMEM55B-207ENST00000557041 MCM6Q14566 821 aa17.23■□□□□ 0.35
TMEM55B-207ENST00000557041 TXNRD1Q16881 649 aa17.23■□□□□ 0.35
TMEM55B-207ENST00000557041 SPICE1Q8N0Z3 855 aa17.23■□□□□ 0.35
TMEM55B-207ENST00000557041 ZFP91Q96JP5 570 aaPredicted RBP17.23■□□□□ 0.35
TMEM55B-207ENST00000557041 GTPBP6O43824 516 aaPredicted RBP17.23■□□□□ 0.35
TMEM55B-207ENST00000557041 MATR3P43243 847 aaKnown RBP eCLIP17.23■□□□□ 0.35
TMEM55B-207ENST00000557041 PPP2R3AQ06190 1150 aa17.23■□□□□ 0.35
TMEM55B-207ENST00000557041 PDE4CQ08493 712 aa17.23■□□□□ 0.35
TMEM55B-207ENST00000557041 SNX29Q8TEQ0 813 aa17.23■□□□□ 0.35
TMEM55B-207ENST00000557041 INTS13Q9NVM9 706 aa17.23■□□□□ 0.35
TMEM55B-207ENST00000557041 POLLQ9UGP5 575 aa17.23■□□□□ 0.35
TMEM55B-207ENST00000557041 ERCC5P28715 1186 aaPredicted RBP17.22■□□□□ 0.35
TMEM55B-207ENST00000557041 CALCRLQ16602 461 aa17.22■□□□□ 0.35
TMEM55B-207ENST00000557041 SLC10A5Q5PT55 438 aa17.22■□□□□ 0.35
TMEM55B-207ENST00000557041 TTBK2Q6IQ55 1244 aa17.22■□□□□ 0.35
TMEM55B-207ENST00000557041 NELFCDQ8IXH7 590 aa17.22■□□□□ 0.35
TMEM55B-207ENST00000557041 FAM207AQ9NSI2 230 aaPredicted RBP17.22■□□□□ 0.35
TMEM55B-207ENST00000557041 TFR2Q9UP52 801 aa17.22■□□□□ 0.35
TMEM55B-207ENST00000557041 MACROD2A1Z1Q3 448 aa17.22■□□□□ 0.35
TMEM55B-207ENST00000557041 POTEMA6NI47 508 aa17.22■□□□□ 0.35
TMEM55B-207ENST00000557041 B4DLN1 442 aa17.22■□□□□ 0.35
TMEM55B-207ENST00000557041 ENC1O14682 589 aa17.22■□□□□ 0.35
TMEM55B-207ENST00000557041 OR52Z1P0C646 297 aa17.22■□□□□ 0.35
TMEM55B-207ENST00000557041 TDRD12Q587J7 1177 aaKnown RBP17.22■□□□□ 0.35
TMEM55B-207ENST00000557041 NYAP1Q6ZVC0 841 aa17.22■□□□□ 0.35
TMEM55B-207ENST00000557041 NEK8Q86SG6 692 aa17.22■□□□□ 0.35
TMEM55B-207ENST00000557041 FCHSD1Q86WN1 690 aa17.22■□□□□ 0.35
TMEM55B-207ENST00000557041 A0A0U1RQJ8 604 aa17.22■□□□□ 0.35
TMEM55B-207ENST00000557041 COPB1P53618 953 aaKnown RBP17.22■□□□□ 0.35
TMEM55B-207ENST00000557041 KMT5BQ4FZB7 885 aa17.22■□□□□ 0.35
TMEM55B-207ENST00000557041 ATRIPQ8WXE1 791 aa17.22■□□□□ 0.35
TMEM55B-207ENST00000557041 DISC1Q9NRI5 854 aa17.22■□□□□ 0.35
TMEM55B-207ENST00000557041 CNTNAP4Q9C0A0 1308 aa17.21■□□□□ 0.35
TMEM55B-207ENST00000557041 CYTH3O43739 400 aa17.21■□□□□ 0.35
TMEM55B-207ENST00000557041 APBA3O96018 575 aa17.21■□□□□ 0.35
TMEM55B-207ENST00000557041 AKR1B1P15121 316 aa17.21■□□□□ 0.35
TMEM55B-207ENST00000557041 FKBP15Q5T1M5 1219 aa17.21■□□□□ 0.35
TMEM55B-207ENST00000557041 CNGA4Q8IV77 575 aa17.21■□□□□ 0.35
TMEM55B-207ENST00000557041 TC2NQ8N9U0 490 aa17.21■□□□□ 0.35
TMEM55B-207ENST00000557041 NOC4LQ9BVI4 516 aaKnown RBP17.21■□□□□ 0.35
TMEM55B-207ENST00000557041 HSD3B7Q9H2F3 369 aa17.21■□□□□ 0.35
TMEM55B-207ENST00000557041 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.21■□□□□ 0.35
TMEM55B-207ENST00000557041 PLEKHG2Q9H7P9 1386 aa17.21■□□□□ 0.35
TMEM55B-207ENST00000557041 STX10O60499 249 aa17.21■□□□□ 0.35
TMEM55B-207ENST00000557041 FXR1P51114 621 aaKnown RBP eCLIP17.21■□□□□ 0.35
TMEM55B-207ENST00000557041 MDM2Q00987 491 aaPredicted RBP17.21■□□□□ 0.35
TMEM55B-207ENST00000557041 FUT2Q10981 343 aa17.21■□□□□ 0.35
TMEM55B-207ENST00000557041 KRT79Q5XKE5 535 aa17.21■□□□□ 0.35
TMEM55B-207ENST00000557041 CACNA2D4Q7Z3S7 1137 aa17.21■□□□□ 0.35
TMEM55B-207ENST00000557041 TBC1D16Q8TBP0 767 aa17.21■□□□□ 0.35
TMEM55B-207ENST00000557041 BMP2KQ9NSY1 1161 aaPredicted RBP17.21■□□□□ 0.35
TMEM55B-207ENST00000557041 PCDHA6Q9UN73 950 aa17.21■□□□□ 0.35
TMEM55B-207ENST00000557041 PCDHA8Q9Y5H6 950 aa17.21■□□□□ 0.35
TMEM55B-207ENST00000557041 PPEF1O14829 653 aaPredicted RBP17.2■□□□□ 0.34
TMEM55B-207ENST00000557041 GDF11O95390 407 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms