RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 SLC20A2Q08357 652 aa12.81□□□□□ -0.36
SRP54-213ENST00000556994 WDR59Q6PJI9 974 aa12.81□□□□□ -0.36
SRP54-213ENST00000556994 GSPT2Q8IYD1 628 aaKnown RBP12.81□□□□□ -0.36
SRP54-213ENST00000556994 MB21D1Q8N884 522 aa12.81□□□□□ -0.36
SRP54-213ENST00000556994 OR8K1Q8NGG5 319 aa12.81□□□□□ -0.36
SRP54-213ENST00000556994 RIN2Q8WYP3 895 aaPredicted RBP12.81□□□□□ -0.36
SRP54-213ENST00000556994 TSPYL1Q9H0U9 437 aa12.81□□□□□ -0.36
SRP54-213ENST00000556994 RASSF4Q9H2L5 321 aa12.81□□□□□ -0.36
SRP54-213ENST00000556994 BCL9LQ86UU0 1499 aa12.81□□□□□ -0.36
SRP54-213ENST00000556994 STAT6P42226 847 aa12.8□□□□□ -0.36
SRP54-213ENST00000556994 KLK7P49862 253 aa12.8□□□□□ -0.36
SRP54-213ENST00000556994 TRIM14Q14142 442 aa12.8□□□□□ -0.36
SRP54-213ENST00000556994 CTR9Q6PD62 1173 aa12.8□□□□□ -0.36
SRP54-213ENST00000556994 RASSF8Q8NHQ8 419 aa12.8□□□□□ -0.36
SRP54-213ENST00000556994 FAM71BQ8TC56 605 aa12.8□□□□□ -0.36
SRP54-213ENST00000556994 AGPAT5Q9NUQ2 364 aa12.8□□□□□ -0.36
SRP54-213ENST00000556994 DUSP10Q9Y6W6 482 aa12.8□□□□□ -0.36
SRP54-213ENST00000556994 RCCD1A6NED2 376 aa12.8□□□□□ -0.36
SRP54-213ENST00000556994 H7C1D1 291 aa12.8□□□□□ -0.36
SRP54-213ENST00000556994 ZNF185O15231 689 aa12.8□□□□□ -0.36
SRP54-213ENST00000556994 RNF40O75150 1001 aa12.8□□□□□ -0.36
SRP54-213ENST00000556994 SCG2P13521 617 aa12.8□□□□□ -0.36
SRP54-213ENST00000556994 IL6STP40189 918 aaPredicted RBP12.8□□□□□ -0.36
SRP54-213ENST00000556994 USP14P54578 494 aa12.8□□□□□ -0.36
SRP54-213ENST00000556994 WDR93Q6P2C0 686 aa12.8□□□□□ -0.36
SRP54-213ENST00000556994 CTCFLQ8NI51 663 aaPredicted RBP12.8□□□□□ -0.36
SRP54-213ENST00000556994 ZNF384Q8TF68 577 aa12.8□□□□□ -0.36
SRP54-213ENST00000556994 GPKOWQ92917 476 aaPredicted RBP eCLIP12.8□□□□□ -0.36
SRP54-213ENST00000556994 GNL3LQ9NVN8 582 aaKnown RBP12.8□□□□□ -0.36
SRP54-213ENST00000556994 RSPH14Q9UHP6 348 aa12.8□□□□□ -0.36
SRP54-213ENST00000556994 SAR1BQ9Y6B6 198 aa12.8□□□□□ -0.36
SRP54-213ENST00000556994 ANKRD36CQ5JPF3 1778 aa12.8□□□□□ -0.36
SRP54-213ENST00000556994 DCCP43146 1447 aa12.8□□□□□ -0.36
SRP54-213ENST00000556994 ARAP2Q8WZ64 1704 aa12.8□□□□□ -0.36
SRP54-213ENST00000556994 SYF2O95926 243 aaKnown RBP12.79□□□□□ -0.36
SRP54-213ENST00000556994 CCDC152Q4G0S7 254 aa12.79□□□□□ -0.36
SRP54-213ENST00000556994 LRRC31Q6UY01 552 aa12.79□□□□□ -0.36
SRP54-213ENST00000556994 ADSSL1Q8N142 457 aa12.79□□□□□ -0.36
SRP54-213ENST00000556994 LACRTQ9GZZ8 138 aa12.79□□□□□ -0.36
SRP54-213ENST00000556994 HAUS4Q9H6D7 363 aa12.79□□□□□ -0.36
SRP54-213ENST00000556994 FAM205AQ6ZU69 1335 aa12.79□□□□□ -0.36
SRP54-213ENST00000556994 MYH13Q9UKX3 1938 aa12.79□□□□□ -0.36
SRP54-213ENST00000556994 B4DLN1 442 aa12.79□□□□□ -0.36
SRP54-213ENST00000556994 PSMD14O00487 310 aa12.79□□□□□ -0.36
SRP54-213ENST00000556994 TSR1Q2NL82 804 aaKnown RBP12.79□□□□□ -0.36
SRP54-213ENST00000556994 NAALADL2Q58DX5 795 aa12.79□□□□□ -0.36
SRP54-213ENST00000556994 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.79□□□□□ -0.36
SRP54-213ENST00000556994 KIAA1328Q86T90 577 aa12.79□□□□□ -0.36
SRP54-213ENST00000556994 MSL3Q8N5Y2 521 aaKnown RBP12.79□□□□□ -0.36
SRP54-213ENST00000556994 C4orf32Q8N8J7 132 aa12.79□□□□□ -0.36
SRP54-213ENST00000556994 TRIM47Q96LD4 638 aa12.79□□□□□ -0.36
SRP54-213ENST00000556994 RMND1Q9NWS8 449 aa12.79□□□□□ -0.36
SRP54-213ENST00000556994 LGALS16A8MUM7 142 aa12.78□□□□□ -0.36
SRP54-213ENST00000556994 CALM1P0DP23 149 aa12.78□□□□□ -0.36
SRP54-213ENST00000556994 CALM2P0DP24 149 aa12.78□□□□□ -0.36
SRP54-213ENST00000556994 CALM3P0DP25 149 aa12.78□□□□□ -0.36
SRP54-213ENST00000556994 MYBL2P10244 700 aa12.78□□□□□ -0.36
SRP54-213ENST00000556994 CYP2D6P10635 497 aa12.78□□□□□ -0.36
SRP54-213ENST00000556994 CYP27A1Q02318 531 aa12.78□□□□□ -0.36
SRP54-213ENST00000556994 GPIHBP1Q8IV16 184 aa12.78□□□□□ -0.36
SRP54-213ENST00000556994 ZNF507Q8TCN5 953 aa12.78□□□□□ -0.36
SRP54-213ENST00000556994 DNAJC7Q99615 494 aa12.78□□□□□ -0.36
SRP54-213ENST00000556994 CAPN11Q9UMQ6 739 aa12.78□□□□□ -0.36
SRP54-213ENST00000556994 MTMR7Q9Y216 660 aa12.78□□□□□ -0.36
SRP54-213ENST00000556994 ITGB4P16144 1822 aa12.78□□□□□ -0.36
SRP54-213ENST00000556994 LRP5O75197 1615 aa12.78□□□□□ -0.36
SRP54-213ENST00000556994 MACROD2A1Z1Q3 448 aa12.78□□□□□ -0.36
SRP54-213ENST00000556994 NKRFO15226 690 aaKnown RBP eCLIP12.78□□□□□ -0.36
SRP54-213ENST00000556994 DDAH1O94760 285 aa12.78□□□□□ -0.36
SRP54-213ENST00000556994 IVLP07476 585 aa12.78□□□□□ -0.36
SRP54-213ENST00000556994 JAKMIP2Q96AA8 810 aa12.78□□□□□ -0.36
SRP54-213ENST00000556994 TMEM60Q9H2L4 133 aa12.78□□□□□ -0.36
SRP54-213ENST00000556994 DISC1Q9NRI5 854 aa12.78□□□□□ -0.36
SRP54-213ENST00000556994 BTG4Q9NY30 223 aa12.78□□□□□ -0.36
SRP54-213ENST00000556994 HPCAL4Q9UM19 191 aa12.78□□□□□ -0.36
SRP54-213ENST00000556994 DUOX1Q9NRD9 1551 aa12.78□□□□□ -0.36
SRP54-213ENST00000556994 COL4A1P02462 1669 aa12.77□□□□□ -0.36
SRP54-213ENST00000556994 PDE2AO00408 941 aaPredicted RBP12.77□□□□□ -0.36
SRP54-213ENST00000556994 BCL9O00512 1426 aa12.77□□□□□ -0.36
SRP54-213ENST00000556994 TRIM21P19474 475 aaKnown RBP12.77□□□□□ -0.36
SRP54-213ENST00000556994 LONP1P36776 959 aaKnown RBP12.77□□□□□ -0.36
SRP54-213ENST00000556994 EIF5P55010 431 aaKnown RBP12.77□□□□□ -0.36
SRP54-213ENST00000556994 MRPS25P82663 173 aaKnown RBP12.77□□□□□ -0.36
SRP54-213ENST00000556994 PFKFB3Q16875 520 aaPredicted RBP12.77□□□□□ -0.36
SRP54-213ENST00000556994 CAGE1Q8TC20 777 aa12.77□□□□□ -0.36
SRP54-213ENST00000556994 LRRC15Q8TF66 581 aa12.77□□□□□ -0.36
SRP54-213ENST00000556994 ACBD3Q9H3P7 528 aa12.77□□□□□ -0.36
SRP54-213ENST00000556994 MED4Q9NPJ6 270 aa12.77□□□□□ -0.36
SRP54-213ENST00000556994 NIP7Q9Y221 180 aaKnown RBP eCLIP12.77□□□□□ -0.36
SRP54-213ENST00000556994 COL1A1P02452 1464 aaPredicted RBP12.77□□□□□ -0.37
SRP54-213ENST00000556994 RASSF10A6NK89 507 aa12.77□□□□□ -0.37
SRP54-213ENST00000556994 C2orf54Q08AI8 447 aa12.77□□□□□ -0.37
SRP54-213ENST00000556994 PAPD7Q5XG87 772 aaKnown RBP12.77□□□□□ -0.37
SRP54-213ENST00000556994 BLIDQ8IZY5 108 aa12.77□□□□□ -0.37
SRP54-213ENST00000556994 SMCR8Q8TEV9 937 aaPredicted RBP12.77□□□□□ -0.37
SRP54-213ENST00000556994 PCMTD1Q96MG8 357 aaPredicted RBP12.77□□□□□ -0.37
SRP54-213ENST00000556994 BRIP1Q9BX63 1249 aa12.77□□□□□ -0.37
SRP54-213ENST00000556994 NHEJ1Q9H9Q4 299 aaPredicted RBP12.77□□□□□ -0.37
SRP54-213ENST00000556994 JADE2Q9NQC1 790 aa12.77□□□□□ -0.37
SRP54-213ENST00000556994 CICQ96RK0 1608 aaPredicted RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms