RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 DPH2Q9BQC3 489 aaPredicted RBP5.9□□□□□ -1.46
SRP54-212ENST00000556992 KRTAP4-5Q9BYR2 181 aa5.9□□□□□ -1.46
SRP54-212ENST00000556992 CEP44Q9C0F1 390 aa5.9□□□□□ -1.46
SRP54-212ENST00000556992 DCP1AQ9NPI6 582 aaPredicted RBP5.9□□□□□ -1.46
SRP54-212ENST00000556992 SAMM50Q9Y512 469 aa5.9□□□□□ -1.46
SRP54-212ENST00000556992 ZBED9Q6R2W3 1325 aa5.9□□□□□ -1.47
SRP54-212ENST00000556992 UGGT1Q9NYU2 1555 aa5.89□□□□□ -1.47
SRP54-212ENST00000556992 BCORL1Q5H9F3 1711 aa5.89□□□□□ -1.47
SRP54-212ENST00000556992 B8ZZF3 427 aa5.89□□□□□ -1.47
SRP54-212ENST00000556992 TREHO43280 583 aa5.89□□□□□ -1.47
SRP54-212ENST00000556992 INHBBP09529 407 aa5.89□□□□□ -1.47
SRP54-212ENST00000556992 PPP2R1AP30153 589 aa5.89□□□□□ -1.47
SRP54-212ENST00000556992 TNK2Q07912 1038 aa5.89□□□□□ -1.47
SRP54-212ENST00000556992 LRRC14Q15048 493 aa5.89□□□□□ -1.47
SRP54-212ENST00000556992 WIPI1Q5MNZ9 446 aaPredicted RBP5.89□□□□□ -1.47
SRP54-212ENST00000556992 CDH24Q86UP0 819 aa5.89□□□□□ -1.47
SRP54-212ENST00000556992 ABHD4Q8TB40 342 aa5.89□□□□□ -1.47
SRP54-212ENST00000556992 PRAM1Q96QH2 718 aa5.89□□□□□ -1.47
SRP54-212ENST00000556992 WNT10AQ9GZT5 417 aa5.89□□□□□ -1.47
SRP54-212ENST00000556992 EPB41L4BQ9H329 900 aa5.89□□□□□ -1.47
SRP54-212ENST00000556992 EID1Q9Y6B2 187 aa5.89□□□□□ -1.47
SRP54-212ENST00000556992 NCANO14594 1321 aa5.89□□□□□ -1.47
SRP54-212ENST00000556992 INSRP06213 1382 aa5.89□□□□□ -1.47
SRP54-212ENST00000556992 ERVK-7P63135 1459 aa5.89□□□□□ -1.47
SRP54-212ENST00000556992 ADGRB3O60242 1522 aa5.89□□□□□ -1.47
SRP54-212ENST00000556992 LAMC1P11047 1609 aa5.88□□□□□ -1.47
SRP54-212ENST00000556992 TRPM1Q7Z4N2 1603 aa5.88□□□□□ -1.47
SRP54-212ENST00000556992 ETV2O00321 342 aaPredicted RBP5.88□□□□□ -1.47
SRP54-212ENST00000556992 PRRG2O14669 202 aa5.88□□□□□ -1.47
SRP54-212ENST00000556992 TMEM253P0C7T8 217 aa5.88□□□□□ -1.47
SRP54-212ENST00000556992 KCNA10Q16322 511 aa5.88□□□□□ -1.47
SRP54-212ENST00000556992 LCE5AQ5TCM9 118 aa5.88□□□□□ -1.47
SRP54-212ENST00000556992 ERICH6BQ5W0A0 696 aa5.88□□□□□ -1.47
SRP54-212ENST00000556992 TTLL10Q6ZVT0 673 aa5.88□□□□□ -1.47
SRP54-212ENST00000556992 MORC1Q86VD1 984 aa5.88□□□□□ -1.47
SRP54-212ENST00000556992 THEMISQ8N1K5 641 aaPredicted RBP5.88□□□□□ -1.47
SRP54-212ENST00000556992 SLC12A5Q9H2X9 1139 aa5.88□□□□□ -1.47
SRP54-212ENST00000556992 TERF2IPQ9NYB0 399 aa5.88□□□□□ -1.47
SRP54-212ENST00000556992 TNRQ92752 1358 aa5.88□□□□□ -1.47
SRP54-212ENST00000556992 LTBP4Q8N2S1 1624 aa5.88□□□□□ -1.47
SRP54-212ENST00000556992 ESR1P03372 595 aa5.87□□□□□ -1.47
SRP54-212ENST00000556992 GRK4P32298 578 aa5.87□□□□□ -1.47
SRP54-212ENST00000556992 WDR43Q15061 677 aaKnown RBP eCLIP5.87□□□□□ -1.47
SRP54-212ENST00000556992 C22orf34Q6ZV56 151 aa5.87□□□□□ -1.47
SRP54-212ENST00000556992 SIAH1Q8IUQ4 282 aa5.87□□□□□ -1.47
SRP54-212ENST00000556992 NGEFQ8N5V2 710 aa5.87□□□□□ -1.47
SRP54-212ENST00000556992 CDK19Q9BWU1 502 aa5.87□□□□□ -1.47
SRP54-212ENST00000556992 CD320Q9NPF0 282 aa5.87□□□□□ -1.47
SRP54-212ENST00000556992 SUPT16HQ9Y5B9 1047 aaKnown RBP5.87□□□□□ -1.47
SRP54-212ENST00000556992 CGNL1Q0VF96 1302 aa5.87□□□□□ -1.47
SRP54-212ENST00000556992 LRPPRCP42704 1394 aaKnown RBP5.87□□□□□ -1.47
SRP54-212ENST00000556992 ABCC11Q96J66 1382 aa5.87□□□□□ -1.47
SRP54-212ENST00000556992 RIMS2Q9UQ26 1411 aa5.87□□□□□ -1.47
SRP54-212ENST00000556992 MADDQ8WXG6 1647 aa5.87□□□□□ -1.47
SRP54-212ENST00000556992 RICTORQ6R327 1708 aa5.86□□□□□ -1.47
SRP54-212ENST00000556992 A2ML1A8K2U0 1454 aa5.86□□□□□ -1.47
SRP54-212ENST00000556992 NINLQ9Y2I6 1382 aa5.86□□□□□ -1.47
SRP54-212ENST00000556992 TCAF2A6NFQ2 919 aa5.86□□□□□ -1.47
SRP54-212ENST00000556992 USP17L7P0C7H9 530 aa5.86□□□□□ -1.47
SRP54-212ENST00000556992 SEPT6Q14141 434 aa5.86□□□□□ -1.47
SRP54-212ENST00000556992 HDXQ7Z353 690 aa5.86□□□□□ -1.47
SRP54-212ENST00000556992 HDGFL2Q7Z4V5 671 aaPredicted RBP5.86□□□□□ -1.47
SRP54-212ENST00000556992 MFSD2AQ8NA29 543 aa5.86□□□□□ -1.47
SRP54-212ENST00000556992 ADAMTS10Q9H324 1103 aa5.86□□□□□ -1.47
SRP54-212ENST00000556992 C19orf44Q9H6X5 657 aa5.86□□□□□ -1.47
SRP54-212ENST00000556992 PPM1HQ9ULR3 514 aa5.86□□□□□ -1.47
SRP54-212ENST00000556992 CYP8B1Q9UNU6 501 aa5.86□□□□□ -1.47
SRP54-212ENST00000556992 SMG5Q9UPR3 1016 aaKnown RBP5.86□□□□□ -1.47
SRP54-212ENST00000556992 PCDHB5Q9Y5E4 795 aa5.86□□□□□ -1.47
SRP54-212ENST00000556992 SPHKAPQ2M3C7 1700 aa5.85□□□□□ -1.47
SRP54-212ENST00000556992 SETBP1Q9Y6X0 1596 aa5.85□□□□□ -1.47
SRP54-212ENST00000556992 IQSEC2Q5JU85 1478 aa5.85□□□□□ -1.47
SRP54-212ENST00000556992 YTHDC2Q9H6S0 1430 aaKnown RBP5.85□□□□□ -1.47
SRP54-212ENST00000556992 TMEM2Q9UHN6 1383 aa5.85□□□□□ -1.47
SRP54-212ENST00000556992 CEBPAP49715 358 aaPredicted RBP5.85□□□□□ -1.47
SRP54-212ENST00000556992 SAFB2Q14151 953 aaKnown RBP eCLIP5.85□□□□□ -1.47
SRP54-212ENST00000556992 CREG2Q8IUH2 290 aa5.85□□□□□ -1.47
SRP54-212ENST00000556992 HID1Q8IV36 788 aa5.85□□□□□ -1.47
SRP54-212ENST00000556992 MYLIPQ8WY64 445 aa5.85□□□□□ -1.47
SRP54-212ENST00000556992 CFAP53Q96M91 514 aa5.85□□□□□ -1.47
SRP54-212ENST00000556992 RNF32Q9H0A6 362 aa5.85□□□□□ -1.47
SRP54-212ENST00000556992 TMEM59LQ9UK28 342 aa5.85□□□□□ -1.47
SRP54-212ENST00000556992 TBX22Q9Y458 520 aa5.85□□□□□ -1.47
SRP54-212ENST00000556992 NUAK1O60285 661 aa5.84□□□□□ -1.47
SRP54-212ENST00000556992 CST3P01034 146 aaPredicted RBP5.84□□□□□ -1.47
SRP54-212ENST00000556992 RAC2P15153 192 aa5.84□□□□□ -1.47
SRP54-212ENST00000556992 CIAPIN1Q6FI81 312 aa5.84□□□□□ -1.47
SRP54-212ENST00000556992 TTBK2Q6IQ55 1244 aa5.84□□□□□ -1.47
SRP54-212ENST00000556992 WAPLQ7Z5K2 1190 aa5.84□□□□□ -1.47
SRP54-212ENST00000556992 THAP5Q7Z6K1 395 aa5.84□□□□□ -1.47
SRP54-212ENST00000556992 KCNN1Q92952 543 aa5.84□□□□□ -1.47
SRP54-212ENST00000556992 Q96M66 194 aa5.84□□□□□ -1.47
SRP54-212ENST00000556992 KRTAP9-3Q9BYQ3 159 aa5.84□□□□□ -1.47
SRP54-212ENST00000556992 IRF2BPLQ9H1B7 796 aa5.84□□□□□ -1.47
SRP54-212ENST00000556992 TTF2Q9UNY4 1162 aaKnown RBP5.84□□□□□ -1.47
SRP54-212ENST00000556992 NUDCQ9Y266 331 aa5.84□□□□□ -1.47
SRP54-212ENST00000556992 ADGRB1O14514 1584 aa5.84□□□□□ -1.48
SRP54-212ENST00000556992 SYNMO15061 1565 aa5.84□□□□□ -1.48
SRP54-212ENST00000556992 SMG6Q86US8 1419 aaKnown RBP5.83□□□□□ -1.48
SRP54-212ENST00000556992 ANKRD36BQ8N2N9 1353 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms