RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 ACER1Q8TDN7 264 aa27.43■■□□□ 1.98
SIX4-203ENST00000556952 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.43■■□□□ 1.98
SIX4-203ENST00000556952 BAZ2BQ9UIF8 2168 aaKnown RBP27.42■■□□□ 1.98
SIX4-203ENST00000556952 SPDYE5A6NIY4 337 aa27.42■■□□□ 1.98
SIX4-203ENST00000556952 SCG2P13521 617 aa27.42■■□□□ 1.98
SIX4-203ENST00000556952 RIOX1Q9H6W3 641 aa27.42■■□□□ 1.98
SIX4-203ENST00000556952 VCPKMTQ9H867 229 aa27.42■■□□□ 1.98
SIX4-203ENST00000556952 PICK1Q9NRD5 415 aa27.42■■□□□ 1.98
SIX4-203ENST00000556952 RAD21O60216 631 aa27.41■■□□□ 1.98
SIX4-203ENST00000556952 MAP2K2P36507 400 aa27.41■■□□□ 1.98
SIX4-203ENST00000556952 GUCY1B3Q02153 619 aa27.41■■□□□ 1.98
SIX4-203ENST00000556952 KRT40Q6A162 431 aa27.41■■□□□ 1.98
SIX4-203ENST00000556952 OTUD5Q96G74 571 aa27.41■■□□□ 1.98
SIX4-203ENST00000556952 AS3MTQ9HBK9 375 aa27.41■■□□□ 1.98
SIX4-203ENST00000556952 BAG4O95429 457 aaKnown RBP27.4■■□□□ 1.98
SIX4-203ENST00000556952 RESTQ13127 1097 aa27.4■■□□□ 1.98
SIX4-203ENST00000556952 SLC35G1Q2M3R5 365 aa27.4■■□□□ 1.98
SIX4-203ENST00000556952 RRP36Q96EU6 259 aaKnown RBP27.4■■□□□ 1.98
SIX4-203ENST00000556952 GPCPD1Q9NPB8 672 aa27.4■■□□□ 1.98
SIX4-203ENST00000556952 ZBTB48P10074 688 aaPredicted RBP27.39■■□□□ 1.98
SIX4-203ENST00000556952 BMP3P12645 472 aa27.39■■□□□ 1.98
SIX4-203ENST00000556952 KCTD1Q719H9 257 aa27.39■■□□□ 1.98
SIX4-203ENST00000556952 FERMT3Q86UX7 667 aa27.39■■□□□ 1.98
SIX4-203ENST00000556952 ERO1BQ86YB8 467 aa27.39■■□□□ 1.98
SIX4-203ENST00000556952 FAM177A1Q8N128 213 aaPredicted RBP27.39■■□□□ 1.98
SIX4-203ENST00000556952 PTPRFP10586 1907 aa27.39■■□□□ 1.98
SIX4-203ENST00000556952 CCDC84Q86UT8 332 aaPredicted RBP27.39■■□□□ 1.97
SIX4-203ENST00000556952 FEZ1Q99689 392 aa27.39■■□□□ 1.97
SIX4-203ENST00000556952 WDR18Q9BV38 432 aa27.39■■□□□ 1.97
SIX4-203ENST00000556952 KIAA1683Q9H0B3 1180 aa27.39■■□□□ 1.97
SIX4-203ENST00000556952 SEC63Q9UGP8 760 aaKnown RBP27.39■■□□□ 1.97
SIX4-203ENST00000556952 hCG_1642624A0A1W2PR95 340 aa27.38■■□□□ 1.97
SIX4-203ENST00000556952 MMP1P03956 469 aa27.38■■□□□ 1.97
SIX4-203ENST00000556952 PTPRAP18433 802 aa27.38■■□□□ 1.97
SIX4-203ENST00000556952 NFKBIBQ15653 356 aa27.38■■□□□ 1.97
SIX4-203ENST00000556952 OTUD7BQ6GQQ9 843 aa27.38■■□□□ 1.97
SIX4-203ENST00000556952 UBA5Q9GZZ9 404 aa27.38■■□□□ 1.97
SIX4-203ENST00000556952 SH3GLB2Q9NR46 395 aa27.38■■□□□ 1.97
SIX4-203ENST00000556952 GJB4Q9NTQ9 266 aa27.38■■□□□ 1.97
SIX4-203ENST00000556952 TCHHQ07283 1943 aa27.37■■□□□ 1.97
SIX4-203ENST00000556952 MCTP1Q6DN14 999 aa27.37■■□□□ 1.97
SIX4-203ENST00000556952 LPAR1Q92633 364 aa27.37■■□□□ 1.97
SIX4-203ENST00000556952 CPVLQ9H3G5 476 aa27.37■■□□□ 1.97
SIX4-203ENST00000556952 ISY1Q9ULR0 285 aaKnown RBP27.37■■□□□ 1.97
SIX4-203ENST00000556952 hCG_1984214I3L0E3 225 aa27.36■■□□□ 1.97
SIX4-203ENST00000556952 SAFBQ15424 915 aaKnown RBP eCLIP27.36■■□□□ 1.97
SIX4-203ENST00000556952 ZNF713Q8N859 430 aaPredicted RBP27.36■■□□□ 1.97
SIX4-203ENST00000556952 VPS54Q9P1Q0 977 aa27.36■■□□□ 1.97
SIX4-203ENST00000556952 MCM4P33991 863 aa27.35■■□□□ 1.97
SIX4-203ENST00000556952 USP14P54578 494 aa27.35■■□□□ 1.97
SIX4-203ENST00000556952 PPATQ06203 517 aa27.35■■□□□ 1.97
SIX4-203ENST00000556952 PPIL2Q13356 520 aa27.35■■□□□ 1.97
SIX4-203ENST00000556952 TTBK2Q6IQ55 1244 aa27.35■■□□□ 1.97
SIX4-203ENST00000556952 BTNL9Q6UXG8 535 aa27.35■■□□□ 1.97
SIX4-203ENST00000556952 BRAPQ7Z569 592 aa27.35■■□□□ 1.97
SIX4-203ENST00000556952 ADGRF4Q8IZF3 695 aa27.35■■□□□ 1.97
SIX4-203ENST00000556952 PIBF1Q8WXW3 757 aa27.35■■□□□ 1.97
SIX4-203ENST00000556952 USP17L10C9JJH3 530 aa27.35■■□□□ 1.97
SIX4-203ENST00000556952 GOLGA6L22H0YM25 854 aa27.35■■□□□ 1.97
SIX4-203ENST00000556952 IRF6O14896 467 aa27.35■■□□□ 1.97
SIX4-203ENST00000556952 SPICE1Q8N0Z3 855 aa27.35■■□□□ 1.97
SIX4-203ENST00000556952 ZNF280CQ8ND82 737 aa27.35■■□□□ 1.97
SIX4-203ENST00000556952 MTMR8Q96EF0 704 aa27.35■■□□□ 1.97
SIX4-203ENST00000556952 PHF20Q9BVI0 1012 aa27.35■■□□□ 1.97
SIX4-203ENST00000556952 JMJD4Q9H9V9 463 aa27.35■■□□□ 1.97
SIX4-203ENST00000556952 DDX11L8A8MPP1 907 aa27.34■■□□□ 1.97
SIX4-203ENST00000556952 HOMER1Q86YM7 354 aa27.34■■□□□ 1.97
SIX4-203ENST00000556952 CCDC148Q8NFR7 591 aa27.34■■□□□ 1.97
SIX4-203ENST00000556952 PIGSQ96S52 555 aa27.34■■□□□ 1.97
SIX4-203ENST00000556952 NUP88Q99567 741 aaPredicted RBP27.34■■□□□ 1.97
SIX4-203ENST00000556952 WBP1LQ9NX94 342 aa27.34■■□□□ 1.97
SIX4-203ENST00000556952 BARHL2Q9NY43 387 aa27.34■■□□□ 1.97
SIX4-203ENST00000556952 PLA2G6O60733 806 aa27.33■■□□□ 1.97
SIX4-203ENST00000556952 ZYXQ15942 572 aaKnown RBP27.33■■□□□ 1.97
SIX4-203ENST00000556952 KIAA1755Q5JYT7 1200 aa27.33■■□□□ 1.97
SIX4-203ENST00000556952 CCDC12Q8WUD4 166 aaPredicted RBP27.33■■□□□ 1.97
SIX4-203ENST00000556952 MS4A4AQ96JQ5 239 aa27.33■■□□□ 1.97
SIX4-203ENST00000556952 VAT1LQ9HCJ6 419 aa27.33■■□□□ 1.97
SIX4-203ENST00000556952 KCNJ14Q9UNX9 436 aa27.33■■□□□ 1.97
SIX4-203ENST00000556952 ZHX2Q9Y6X8 837 aa27.33■■□□□ 1.97
SIX4-203ENST00000556952 TMEM232C9JQI7 657 aa27.32■■□□□ 1.96
SIX4-203ENST00000556952 WDR46O15213 610 aaKnown RBP27.32■■□□□ 1.96
SIX4-203ENST00000556952 U2AF2P26368 475 aaKnown RBP eCLIP27.32■■□□□ 1.96
SIX4-203ENST00000556952 SLC16A2P36021 539 aa27.32■■□□□ 1.96
SIX4-203ENST00000556952 STAT2P52630 851 aa27.32■■□□□ 1.96
SIX4-203ENST00000556952 MAP2K1Q02750 393 aaPredicted RBP27.32■■□□□ 1.96
SIX4-203ENST00000556952 GNL2Q13823 731 aaKnown RBP27.32■■□□□ 1.96
SIX4-203ENST00000556952 FAM83BQ5T0W9 1011 aa27.32■■□□□ 1.96
SIX4-203ENST00000556952 WWC2Q6AWC2 1192 aa27.32■■□□□ 1.96
SIX4-203ENST00000556952 HEATR3Q7Z4Q2 680 aa27.32■■□□□ 1.96
SIX4-203ENST00000556952 SHISA4Q96DD7 197 aa27.32■■□□□ 1.96
SIX4-203ENST00000556952 FOXP1Q9H334 677 aaPredicted RBP27.32■■□□□ 1.96
SIX4-203ENST00000556952 BRMS1Q9HCU9 246 aa27.32■■□□□ 1.96
SIX4-203ENST00000556952 PNMA6FA0A0J9YX94 578 aa27.31■■□□□ 1.96
SIX4-203ENST00000556952 MANSC4A6NHS7 340 aaPredicted RBP27.31■■□□□ 1.96
SIX4-203ENST00000556952 PTMSP20962 102 aa27.31■■□□□ 1.96
SIX4-203ENST00000556952 CALML3P27482 149 aa27.31■■□□□ 1.96
SIX4-203ENST00000556952 BACE1P56817 501 aa27.31■■□□□ 1.96
SIX4-203ENST00000556952 IKQ13123 557 aaPredicted RBP27.31■■□□□ 1.96
SIX4-203ENST00000556952 FOXD4L6Q3SYB3 417 aaPredicted RBP27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms