RNA–Protein interactions for RNA: ENST00000556774.1

RCCD1-207, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-207ENST00000556774 ADAMTS4O75173 837 aa18.92■□□□□ 0.62
RCCD1-207ENST00000556774 RAG1P15918 1043 aa18.92■□□□□ 0.62
RCCD1-207ENST00000556774 SNRNP48Q6IEG0 339 aaKnown RBP18.92■□□□□ 0.62
RCCD1-207ENST00000556774 ZSCAN25Q6NSZ9 544 aa18.92■□□□□ 0.62
RCCD1-207ENST00000556774 TEX13BQ9BXU2 312 aa18.92■□□□□ 0.62
RCCD1-207ENST00000556774 SMARCA5O60264 1052 aaPredicted RBP18.91■□□□□ 0.62
RCCD1-207ENST00000556774 RASA1P20936 1047 aa18.91■□□□□ 0.62
RCCD1-207ENST00000556774 FPGSQ05932 587 aa18.91■□□□□ 0.62
RCCD1-207ENST00000556774 ZHX1Q9UKY1 873 aaPredicted RBP18.91■□□□□ 0.62
RCCD1-207ENST00000556774 NDUFB10O96000 172 aa18.9■□□□□ 0.62
RCCD1-207ENST00000556774 FOSL2P15408 326 aa18.9■□□□□ 0.62
RCCD1-207ENST00000556774 SLC4A3P48751 1232 aa18.9■□□□□ 0.62
RCCD1-207ENST00000556774 STRBPQ96SI9 672 aaKnown RBP18.9■□□□□ 0.62
RCCD1-207ENST00000556774 LRRCC1Q9C099 1032 aa18.9■□□□□ 0.62
RCCD1-207ENST00000556774 STARD7Q9NQZ5 370 aa18.9■□□□□ 0.62
RCCD1-207ENST00000556774 TMEM39AQ9NV64 488 aa18.9■□□□□ 0.62
RCCD1-207ENST00000556774 RIPK3Q9Y572 518 aa18.9■□□□□ 0.62
RCCD1-207ENST00000556774 TTC28Q96AY4 2481 aa18.89■□□□□ 0.61
RCCD1-207ENST00000556774 MYADML2A6NDP7 307 aa18.89■□□□□ 0.61
RCCD1-207ENST00000556774 SNAI1O95863 264 aaPredicted RBP18.89■□□□□ 0.61
RCCD1-207ENST00000556774 ACLYP53396 1101 aa18.89■□□□□ 0.61
RCCD1-207ENST00000556774 FAAP100Q0VG06 881 aa18.89■□□□□ 0.61
RCCD1-207ENST00000556774 DDX11Q96FC9 970 aa18.89■□□□□ 0.61
RCCD1-207ENST00000556774 TSEN34Q9BSV6 310 aaKnown RBP18.89■□□□□ 0.61
RCCD1-207ENST00000556774 MKNK2Q9HBH9 465 aa18.89■□□□□ 0.61
RCCD1-207ENST00000556774 NYAP2Q9P242 653 aa18.89■□□□□ 0.61
RCCD1-207ENST00000556774 FAM184BQ9ULE4 1060 aa18.89■□□□□ 0.61
RCCD1-207ENST00000556774 SYNGAP1Q96PV0 1343 aa18.89■□□□□ 0.61
RCCD1-207ENST00000556774 DNAJC25-GNG10A0A024R161 153 aa18.88■□□□□ 0.61
RCCD1-207ENST00000556774 GSG1L2A8MUP6 293 aa18.88■□□□□ 0.61
RCCD1-207ENST00000556774 MINDY4BA8MYZ0 360 aa18.88■□□□□ 0.61
RCCD1-207ENST00000556774 F5H6K3 240 aa18.88■□□□□ 0.61
RCCD1-207ENST00000556774 IRX5P78411 483 aaPredicted RBP18.88■□□□□ 0.61
RCCD1-207ENST00000556774 KLRC3Q07444 240 aa18.88■□□□□ 0.61
RCCD1-207ENST00000556774 SBK1Q52WX2 424 aa18.88■□□□□ 0.61
RCCD1-207ENST00000556774 ANKRD33Q7Z3H0 272 aa18.88■□□□□ 0.61
RCCD1-207ENST00000556774 CPXCR1Q8N123 301 aa18.88■□□□□ 0.61
RCCD1-207ENST00000556774 MSL3Q8N5Y2 521 aaKnown RBP18.88■□□□□ 0.61
RCCD1-207ENST00000556774 MOXD2PA6NHM9 499 aa18.87■□□□□ 0.61
RCCD1-207ENST00000556774 LRRC37A2A6NM11 1700 aa18.87■□□□□ 0.61
RCCD1-207ENST00000556774 DCDC2CA8MYV0 355 aa18.87■□□□□ 0.61
RCCD1-207ENST00000556774 KCNA10Q16322 511 aa18.87■□□□□ 0.61
RCCD1-207ENST00000556774 MAMDC4Q6UXC1 1216 aa18.87■□□□□ 0.61
RCCD1-207ENST00000556774 KLHDC9Q8NEP7 349 aa18.87■□□□□ 0.61
RCCD1-207ENST00000556774 NUP133Q8WUM0 1156 aa18.87■□□□□ 0.61
RCCD1-207ENST00000556774 OSBP2Q969R2 916 aa18.87■□□□□ 0.61
RCCD1-207ENST00000556774 KIFC2Q96AC6 838 aa18.87■□□□□ 0.61
RCCD1-207ENST00000556774 RAVER2Q9HCJ3 691 aaKnown RBP18.87■□□□□ 0.61
RCCD1-207ENST00000556774 EPB41L4AQ9HCS5 686 aaPredicted RBP18.87■□□□□ 0.61
RCCD1-207ENST00000556774 CLIP2Q9UDT6 1046 aa18.87■□□□□ 0.61
RCCD1-207ENST00000556774 CTDP1Q9Y5B0 961 aaPredicted RBP18.87■□□□□ 0.61
RCCD1-207ENST00000556774 TMEM265A0A087WTH1 108 aa18.86■□□□□ 0.61
RCCD1-207ENST00000556774 ADCY6O43306 1168 aa18.86■□□□□ 0.61
RCCD1-207ENST00000556774 DNAJB2P25686 324 aa18.86■□□□□ 0.61
RCCD1-207ENST00000556774 TSHZ3Q63HK5 1081 aa18.86■□□□□ 0.61
RCCD1-207ENST00000556774 CCSAPQ6IQ19 270 aaPredicted RBP18.86■□□□□ 0.61
RCCD1-207ENST00000556774 PRPF38AQ8NAV1 312 aaKnown RBP18.86■□□□□ 0.61
RCCD1-207ENST00000556774 FGD4Q96M96 766 aa18.86■□□□□ 0.61
RCCD1-207ENST00000556774 TOX2Q96NM4 488 aa18.86■□□□□ 0.61
RCCD1-207ENST00000556774 CHMP4BQ9H444 224 aaKnown RBP18.86■□□□□ 0.61
RCCD1-207ENST00000556774 ECHDC1Q9NTX5 307 aa18.86■□□□□ 0.61
RCCD1-207ENST00000556774 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.86■□□□□ 0.61
RCCD1-207ENST00000556774 IGKV6D-41A0A0C4DH26 115 aa18.85■□□□□ 0.61
RCCD1-207ENST00000556774 ATP2A1O14983 1001 aa18.85■□□□□ 0.61
RCCD1-207ENST00000556774 ZBED4O75132 1171 aa18.85■□□□□ 0.61
RCCD1-207ENST00000556774 DUSP11O75319 330 aaKnown RBP18.85■□□□□ 0.61
RCCD1-207ENST00000556774 PRDM1O75626 825 aa18.85■□□□□ 0.61
RCCD1-207ENST00000556774 C6orf222P0C671 652 aaPredicted RBP18.85■□□□□ 0.61
RCCD1-207ENST00000556774 GIMAP6Q6P9H5 292 aa18.85■□□□□ 0.61
RCCD1-207ENST00000556774 LRRC47Q8N1G4 583 aaKnown RBP18.85■□□□□ 0.61
RCCD1-207ENST00000556774 KBTBD3Q8NAB2 608 aa18.85■□□□□ 0.61
RCCD1-207ENST00000556774 APPBP2Q92624 585 aa18.85■□□□□ 0.61
RCCD1-207ENST00000556774 CEP95Q96GE4 821 aa18.85■□□□□ 0.61
RCCD1-207ENST00000556774 TBX21Q9UL17 535 aa18.85■□□□□ 0.61
RCCD1-207ENST00000556774 GPAA1O43292 621 aa18.84■□□□□ 0.61
RCCD1-207ENST00000556774 CST5P28325 142 aaPredicted RBP18.84■□□□□ 0.61
RCCD1-207ENST00000556774 TDO2P48775 406 aa18.84■□□□□ 0.61
RCCD1-207ENST00000556774 ACVR2BQ13705 512 aa18.84■□□□□ 0.61
RCCD1-207ENST00000556774 GRIN2CQ14957 1233 aa18.84■□□□□ 0.61
RCCD1-207ENST00000556774 C20orf194Q5TEA3 1177 aa18.84■□□□□ 0.61
RCCD1-207ENST00000556774 ZNF467Q7Z7K2 595 aaPredicted RBP18.84■□□□□ 0.61
RCCD1-207ENST00000556774 SLC38A10Q9HBR0 1119 aa18.84■□□□□ 0.61
RCCD1-207ENST00000556774 MYO9BQ13459 2157 aa18.83■□□□□ 0.61
RCCD1-207ENST00000556774 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.83■□□□□ 0.6
RCCD1-207ENST00000556774 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.83■□□□□ 0.6
RCCD1-207ENST00000556774 M0R2C6 588 aa18.83■□□□□ 0.6
RCCD1-207ENST00000556774 RNF113AO15541 343 aaKnown RBP18.83■□□□□ 0.6
RCCD1-207ENST00000556774 TIMP1P01033 207 aa18.83■□□□□ 0.6
RCCD1-207ENST00000556774 ASGR1P07306 291 aa18.83■□□□□ 0.6
RCCD1-207ENST00000556774 CCDC144BQ3MJ40 725 aa18.83■□□□□ 0.6
RCCD1-207ENST00000556774 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.83■□□□□ 0.6
RCCD1-207ENST00000556774 ARMCX2Q7L311 632 aa18.83■□□□□ 0.6
RCCD1-207ENST00000556774 ANKRD35Q8N283 1001 aa18.83■□□□□ 0.6
RCCD1-207ENST00000556774 GLT1D1Q96MS3 346 aa18.83■□□□□ 0.6
RCCD1-207ENST00000556774 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.83■□□□□ 0.64e-7■■□□□ 12.7
RCCD1-207ENST00000556774 UPF3AQ9H1J1 476 aaKnown RBP18.83■□□□□ 0.6
RCCD1-207ENST00000556774 HOMER2Q9NSB8 354 aa18.83■□□□□ 0.6
RCCD1-207ENST00000556774 FEM1BQ9UK73 627 aa18.83■□□□□ 0.6
RCCD1-207ENST00000556774 GBF1Q92538 1859 aa18.83■□□□□ 0.6
RCCD1-207ENST00000556774 ELP1O95163 1332 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms