RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 MYH8P13535 1937 aa12.77□□□□□ -0.37
XRCC3-216ENST00000556682 ZMYM6O95789 1325 aa12.77□□□□□ -0.37
XRCC3-216ENST00000556682 TMEM232C9JQI7 657 aa12.76□□□□□ -0.37
XRCC3-216ENST00000556682 H0YGN5 161 aa12.76□□□□□ -0.37
XRCC3-216ENST00000556682 ATP2A1O14983 1001 aa12.76□□□□□ -0.37
XRCC3-216ENST00000556682 COBLO75128 1261 aa12.76□□□□□ -0.37
XRCC3-216ENST00000556682 CYP2C19P33261 490 aa12.76□□□□□ -0.37
XRCC3-216ENST00000556682 OAZ1P54368 228 aa12.76□□□□□ -0.37
XRCC3-216ENST00000556682 IKQ13123 557 aaPredicted RBP12.76□□□□□ -0.37
XRCC3-216ENST00000556682 RRP12Q5JTH9 1297 aaKnown RBP12.76□□□□□ -0.37
XRCC3-216ENST00000556682 SNRNP48Q6IEG0 339 aaKnown RBP12.76□□□□□ -0.37
XRCC3-216ENST00000556682 CWC27Q6UX04 472 aaKnown RBP12.76□□□□□ -0.37
XRCC3-216ENST00000556682 ZNF589Q86UQ0 364 aaPredicted RBP12.76□□□□□ -0.37
XRCC3-216ENST00000556682 FAM160B2Q86V87 743 aa12.76□□□□□ -0.37
XRCC3-216ENST00000556682 CPXCR1Q8N123 301 aa12.76□□□□□ -0.37
XRCC3-216ENST00000556682 REPS2Q8NFH8 660 aa12.76□□□□□ -0.37
XRCC3-216ENST00000556682 DDX20Q9UHI6 824 aaKnown RBP12.76□□□□□ -0.37
XRCC3-216ENST00000556682 ZNF214Q9UL59 606 aaPredicted RBP12.76□□□□□ -0.37
XRCC3-216ENST00000556682 DIS3Q9Y2L1 958 aaKnown RBP12.76□□□□□ -0.37
XRCC3-216ENST00000556682 ZNF213O14771 459 aa12.75□□□□□ -0.37
XRCC3-216ENST00000556682 NT5C2P49902 561 aa12.75□□□□□ -0.37
XRCC3-216ENST00000556682 STAT2P52630 851 aa12.75□□□□□ -0.37
XRCC3-216ENST00000556682 IRX6P78412 446 aaPredicted RBP12.75□□□□□ -0.37
XRCC3-216ENST00000556682 AKNAD1Q5T1N1 836 aa12.75□□□□□ -0.37
XRCC3-216ENST00000556682 LHX8Q68G74 356 aa12.75□□□□□ -0.37
XRCC3-216ENST00000556682 DIS3LQ8TF46 1054 aaKnown RBP12.75□□□□□ -0.37
XRCC3-216ENST00000556682 STAG1Q8WVM7 1258 aa12.75□□□□□ -0.37
XRCC3-216ENST00000556682 DDX11Q96FC9 970 aa12.75□□□□□ -0.37
XRCC3-216ENST00000556682 GMCL1Q96IK5 515 aa12.75□□□□□ -0.37
XRCC3-216ENST00000556682 MAML3Q96JK9 1138 aa12.75□□□□□ -0.37
XRCC3-216ENST00000556682 SLC38A10Q9HBR0 1119 aa12.75□□□□□ -0.37
XRCC3-216ENST00000556682 INCENPQ9NQS7 918 aa12.75□□□□□ -0.37
XRCC3-216ENST00000556682 IL17RBQ9NRM6 502 aa12.75□□□□□ -0.37
XRCC3-216ENST00000556682 TCP11L1Q9NUJ3 509 aa12.75□□□□□ -0.37
XRCC3-216ENST00000556682 FBXO40Q9UH90 709 aa12.75□□□□□ -0.37
XRCC3-216ENST00000556682 NRBP1Q9UHY1 535 aa12.75□□□□□ -0.37
XRCC3-216ENST00000556682 PLA2G6O60733 806 aa12.74□□□□□ -0.37
XRCC3-216ENST00000556682 IGHA2P01877 340 aa12.74□□□□□ -0.37
XRCC3-216ENST00000556682 CYBAP13498 195 aa12.74□□□□□ -0.37
XRCC3-216ENST00000556682 MCCP23508 829 aa12.74□□□□□ -0.37
XRCC3-216ENST00000556682 SLC4A3P48751 1232 aa12.74□□□□□ -0.37
XRCC3-216ENST00000556682 HAND2P61296 217 aa12.74□□□□□ -0.37
XRCC3-216ENST00000556682 RCSD1Q6JBY9 416 aa12.74□□□□□ -0.37
XRCC3-216ENST00000556682 ARRDC4Q8NCT1 418 aa12.74□□□□□ -0.37
XRCC3-216ENST00000556682 CHST13Q8NET6 341 aa12.74□□□□□ -0.37
XRCC3-216ENST00000556682 TTC14Q96N46 770 aa12.74□□□□□ -0.37
XRCC3-216ENST00000556682 CTNNA3Q9UI47 895 aa12.74□□□□□ -0.37
XRCC3-216ENST00000556682 PLXNB2O15031 1838 aa12.74□□□□□ -0.37
XRCC3-216ENST00000556682 BRCA2P51587 3418 aa12.73□□□□□ -0.37
XRCC3-216ENST00000556682 SEPT4O43236 478 aa12.73□□□□□ -0.37
XRCC3-216ENST00000556682 NMT2O60551 498 aa12.73□□□□□ -0.37
XRCC3-216ENST00000556682 PGK2P07205 417 aa12.73□□□□□ -0.37
XRCC3-216ENST00000556682 TOP1P11387 765 aaKnown RBP12.73□□□□□ -0.37
XRCC3-216ENST00000556682 ZNF792Q3KQV3 632 aa12.73□□□□□ -0.37
XRCC3-216ENST00000556682 CCDC178Q5BJE1 867 aa12.73□□□□□ -0.37
XRCC3-216ENST00000556682 HABP4Q5JVS0 413 aaKnown RBP12.73□□□□□ -0.37
XRCC3-216ENST00000556682 MSL3Q8N5Y2 521 aaKnown RBP12.73□□□□□ -0.37
XRCC3-216ENST00000556682 DCAF4Q8WV16 495 aa12.73□□□□□ -0.37
XRCC3-216ENST00000556682 ESR2Q92731 530 aa12.73□□□□□ -0.37
XRCC3-216ENST00000556682 TINF2Q9BSI4 451 aa12.73□□□□□ -0.37
XRCC3-216ENST00000556682 DSCC1Q9BVC3 393 aa12.73□□□□□ -0.37
XRCC3-216ENST00000556682 RAVER2Q9HCJ3 691 aaKnown RBP12.73□□□□□ -0.37
XRCC3-216ENST00000556682 CNPY2Q9Y2B0 182 aa12.73□□□□□ -0.37
XRCC3-216ENST00000556682 GREB1LQ9C091 1923 aaPredicted RBP12.72□□□□□ -0.37
XRCC3-216ENST00000556682 MKI67P46013 3256 aaKnown RBP12.72□□□□□ -0.37
XRCC3-216ENST00000556682 NOVP48745 357 aa12.72□□□□□ -0.37
XRCC3-216ENST00000556682 MNX1P50219 401 aaPredicted RBP12.72□□□□□ -0.37
XRCC3-216ENST00000556682 IMMTQ16891 758 aaKnown RBP12.72□□□□□ -0.37
XRCC3-216ENST00000556682 CCDC96Q2M329 555 aa12.72□□□□□ -0.37
XRCC3-216ENST00000556682 TTC22Q5TAA0 569 aa12.72□□□□□ -0.37
XRCC3-216ENST00000556682 KCTD1Q719H9 257 aa12.72□□□□□ -0.37
XRCC3-216ENST00000556682 ANKRD35Q8N283 1001 aa12.72□□□□□ -0.37
XRCC3-216ENST00000556682 TRPV1Q8NER1 839 aa12.72□□□□□ -0.37
XRCC3-216ENST00000556682 RUFY2Q8WXA3 655 aa12.72□□□□□ -0.37
XRCC3-216ENST00000556682 COLQQ9Y215 455 aaPredicted RBP12.72□□□□□ -0.37
XRCC3-216ENST00000556682 MTMR7Q9Y216 660 aa12.72□□□□□ -0.37
XRCC3-216ENST00000556682 RIPK3Q9Y572 518 aa12.72□□□□□ -0.37
XRCC3-216ENST00000556682 A0A0G2JMZ2 1700 aa12.71□□□□□ -0.37
XRCC3-216ENST00000556682 RLFQ13129 1914 aa12.71□□□□□ -0.37
XRCC3-216ENST00000556682 DNM1LO00429 736 aa12.71□□□□□ -0.37
XRCC3-216ENST00000556682 TKFCQ3LXA3 575 aa12.71□□□□□ -0.37
XRCC3-216ENST00000556682 CHRDL2Q6WN34 429 aa12.71□□□□□ -0.37
XRCC3-216ENST00000556682 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.71□□□□□ -0.375e-6■■■■■ 45.5
XRCC3-216ENST00000556682 IQCA1Q86XH1 822 aa12.71□□□□□ -0.37
XRCC3-216ENST00000556682 CHMP4CQ96CF2 233 aa12.71□□□□□ -0.37
XRCC3-216ENST00000556682 TMEM47Q9BQJ4 181 aa12.71□□□□□ -0.37
XRCC3-216ENST00000556682 ACAD9Q9H845 621 aa12.71□□□□□ -0.37
XRCC3-216ENST00000556682 TACC3Q9Y6A5 838 aa12.71□□□□□ -0.37
XRCC3-216ENST00000556682 KBTBD13C9JR72 458 aa12.7□□□□□ -0.38
XRCC3-216ENST00000556682 SLC34A2O95436 690 aa12.7□□□□□ -0.38
XRCC3-216ENST00000556682 RARBP10826 455 aa12.7□□□□□ -0.38
XRCC3-216ENST00000556682 COL6A1P12109 1028 aa12.7□□□□□ -0.38
XRCC3-216ENST00000556682 PDE4AP27815 886 aa12.7□□□□□ -0.38
XRCC3-216ENST00000556682 PRAMEF19Q5SWL8 479 aa12.7□□□□□ -0.38
XRCC3-216ENST00000556682 ZNF467Q7Z7K2 595 aaPredicted RBP12.7□□□□□ -0.38
XRCC3-216ENST00000556682 DGKHQ86XP1 1220 aa12.7□□□□□ -0.38
XRCC3-216ENST00000556682 TBC1D10CQ8IV04 446 aa12.7□□□□□ -0.38
XRCC3-216ENST00000556682 C7orf61Q8IZ16 206 aa12.7□□□□□ -0.38
XRCC3-216ENST00000556682 SENP6Q9GZR1 1112 aaPredicted RBP12.7□□□□□ -0.38
XRCC3-216ENST00000556682 HOMER2Q9NSB8 354 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms