RNA–Protein interactions for RNA: ENST00000556501.1

GPHN-213, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-213ENST00000556501 GALNT17Q6IS24 598 aa6.12□□□□□ -1.43
GPHN-213ENST00000556501 PRR5LQ6MZQ0 368 aa6.12□□□□□ -1.43
GPHN-213ENST00000556501 PIK3AP1Q6ZUJ8 805 aa6.12□□□□□ -1.43
GPHN-213ENST00000556501 SLC51AQ86UW1 340 aa6.12□□□□□ -1.43
GPHN-213ENST00000556501 REXO1L1PQ8IX06 675 aa6.12□□□□□ -1.43
GPHN-213ENST00000556501 C4orf32Q8N8J7 132 aa6.12□□□□□ -1.43
GPHN-213ENST00000556501 TC2NQ8N9U0 490 aa6.12□□□□□ -1.43
GPHN-213ENST00000556501 IQUBQ8NA54 791 aa6.12□□□□□ -1.43
GPHN-213ENST00000556501 ZNF397Q8NF99 534 aaPredicted RBP6.12□□□□□ -1.43
GPHN-213ENST00000556501 PANX2Q96RD6 677 aa6.12□□□□□ -1.43
GPHN-213ENST00000556501 LZTS2Q9BRK4 669 aa6.12□□□□□ -1.43
GPHN-213ENST00000556501 SPZ1Q9BXG8 430 aa6.12□□□□□ -1.43
GPHN-213ENST00000556501 KDM4CQ9H3R0 1056 aa6.12□□□□□ -1.43
GPHN-213ENST00000556501 IL17RBQ9NRM6 502 aa6.12□□□□□ -1.43
GPHN-213ENST00000556501 SAMSN1Q9NSI8 373 aaKnown RBP6.12□□□□□ -1.43
GPHN-213ENST00000556501 ANKIB1Q9P2G1 1089 aa6.12□□□□□ -1.43
GPHN-213ENST00000556501 MAD2L2Q9UI95 211 aa6.12□□□□□ -1.43
GPHN-213ENST00000556501 USP21Q9UK80 565 aa6.12□□□□□ -1.43
GPHN-213ENST00000556501 ZNF215Q9UL58 517 aaPredicted RBP6.12□□□□□ -1.43
GPHN-213ENST00000556501 PCDHA4Q9UN74 947 aa6.12□□□□□ -1.43
GPHN-213ENST00000556501 ZNF646O15015 1829 aaPredicted RBP6.11□□□□□ -1.43
GPHN-213ENST00000556501 BRWD3Q6RI45 1802 aa6.11□□□□□ -1.43
GPHN-213ENST00000556501 ADAMTSL1Q8N6G6 1762 aa6.11□□□□□ -1.43
GPHN-213ENST00000556501 GAKO14976 1311 aa6.11□□□□□ -1.43
GPHN-213ENST00000556501 ITIH6Q6UXX5 1313 aa6.11□□□□□ -1.43
GPHN-213ENST00000556501 GPR75-ASB3A0A0A6YYF3 556 aa6.11□□□□□ -1.43
GPHN-213ENST00000556501 PALM3A6NDB9 673 aaPredicted RBP6.11□□□□□ -1.43
GPHN-213ENST00000556501 PPP1R3GB7ZBB8 358 aa6.11□□□□□ -1.43
GPHN-213ENST00000556501 STXBP3O00186 592 aa6.11□□□□□ -1.43
GPHN-213ENST00000556501 ADAMTS3O15072 1205 aa6.11□□□□□ -1.43
GPHN-213ENST00000556501 NPHP1O15259 732 aa6.11□□□□□ -1.43
GPHN-213ENST00000556501 UFL1O94874 794 aa6.11□□□□□ -1.43
GPHN-213ENST00000556501 TSPY3P0CV98 308 aa6.11□□□□□ -1.43
GPHN-213ENST00000556501 TSPY8P0CW00 308 aa6.11□□□□□ -1.43
GPHN-213ENST00000556501 IL1R1P14778 569 aa6.11□□□□□ -1.43
GPHN-213ENST00000556501 VEGFAP15692 232 aaPredicted RBP6.11□□□□□ -1.43
GPHN-213ENST00000556501 PLCG2P16885 1265 aa6.11□□□□□ -1.43
GPHN-213ENST00000556501 CDK11BP21127 795 aaKnown RBP6.11□□□□□ -1.43
GPHN-213ENST00000556501 FECHP22830 423 aa6.11□□□□□ -1.43
GPHN-213ENST00000556501 ATP2B4P23634 1241 aa6.11□□□□□ -1.43
GPHN-213ENST00000556501 HOXA10P31260 410 aaPredicted RBP6.11□□□□□ -1.43
GPHN-213ENST00000556501 MCM7P33993 719 aa6.11□□□□□ -1.43
GPHN-213ENST00000556501 TXLNAP40222 546 aa6.11□□□□□ -1.43
GPHN-213ENST00000556501 BTDP43251 543 aa6.11□□□□□ -1.43
GPHN-213ENST00000556501 SPAG1Q07617 926 aa6.11□□□□□ -1.43
GPHN-213ENST00000556501 GOLGA8FQ08AF8 430 aa6.11□□□□□ -1.43
GPHN-213ENST00000556501 GOLGA8DPQ0D2H9 430 aa6.11□□□□□ -1.43
GPHN-213ENST00000556501 SEMA3FQ13275 785 aa6.11□□□□□ -1.43
GPHN-213ENST00000556501 NR1I3Q14994 352 aa6.11□□□□□ -1.43
GPHN-213ENST00000556501 IL17AQ16552 155 aa6.11□□□□□ -1.43
GPHN-213ENST00000556501 CCDC93Q567U6 631 aa6.11□□□□□ -1.43
GPHN-213ENST00000556501 PPP4R3BQ5MIZ7 849 aa6.11□□□□□ -1.43
GPHN-213ENST00000556501 RBM26Q5T8P6 1007 aaKnown RBP6.11□□□□□ -1.43
GPHN-213ENST00000556501 WWC2Q6AWC2 1192 aa6.11□□□□□ -1.43
GPHN-213ENST00000556501 TYW1BQ6NUM6 668 aa6.11□□□□□ -1.43
GPHN-213ENST00000556501 TRIM65Q6PJ69 517 aa6.11□□□□□ -1.43
GPHN-213ENST00000556501 SYT10Q6XYQ8 523 aa6.11□□□□□ -1.43
GPHN-213ENST00000556501 FAM196AQ6ZSG2 479 aa6.11□□□□□ -1.43
GPHN-213ENST00000556501 C16orf86Q6ZW13 317 aa6.11□□□□□ -1.43
GPHN-213ENST00000556501 GPIHBP1Q8IV16 184 aa6.11□□□□□ -1.43
GPHN-213ENST00000556501 STAG2Q8N3U4 1231 aa6.11□□□□□ -1.43
GPHN-213ENST00000556501 SLC44A5Q8NCS7 719 aa6.11□□□□□ -1.43
GPHN-213ENST00000556501 RPGRQ92834 1020 aaKnown RBP6.11□□□□□ -1.43
GPHN-213ENST00000556501 GPKOWQ92917 476 aaPredicted RBP eCLIP6.11□□□□□ -1.43
GPHN-213ENST00000556501 DYNLL2Q96FJ2 89 aa6.11□□□□□ -1.43
GPHN-213ENST00000556501 DDX27Q96GQ7 796 aaKnown RBP6.11□□□□□ -1.43
GPHN-213ENST00000556501 CTAGE1Q96RT6 745 aa6.11□□□□□ -1.43
GPHN-213ENST00000556501 FEZ1Q99689 392 aa6.11□□□□□ -1.43
GPHN-213ENST00000556501 BAG1Q99933 345 aaPredicted RBP6.11□□□□□ -1.43
GPHN-213ENST00000556501 TMEM47Q9BQJ4 181 aa6.11□□□□□ -1.43
GPHN-213ENST00000556501 CRISPLD2Q9H0B8 497 aa6.11□□□□□ -1.43
GPHN-213ENST00000556501 ZNF287Q9HBT7 754 aa6.11□□□□□ -1.43
GPHN-213ENST00000556501 RMND1Q9NWS8 449 aa6.11□□□□□ -1.43
GPHN-213ENST00000556501 ADD3Q9UEY8 706 aaKnown RBP6.11□□□□□ -1.43
GPHN-213ENST00000556501 RWDD2AQ9UIY3 292 aa6.11□□□□□ -1.43
GPHN-213ENST00000556501 CTNND2Q9UQB3 1225 aa6.11□□□□□ -1.43
GPHN-213ENST00000556501 JAG2Q9Y219 1238 aa6.11□□□□□ -1.43
GPHN-213ENST00000556501 PPP2R2CQ9Y2T4 447 aa6.11□□□□□ -1.43
GPHN-213ENST00000556501 FARP1Q9Y4F1 1045 aaPredicted RBP6.11□□□□□ -1.43
GPHN-213ENST00000556501 FLT1P17948 1338 aa6.1□□□□□ -1.43
GPHN-213ENST00000556501 CCDC194A0A1B0GVG4 234 aa6.1□□□□□ -1.43
GPHN-213ENST00000556501 USP17L3A6NCW0 530 aa6.1□□□□□ -1.43
GPHN-213ENST00000556501 USP17L4A6NCW7 530 aa6.1□□□□□ -1.43
GPHN-213ENST00000556501 AKR1B15C9JRZ8 316 aaPredicted RBP6.1□□□□□ -1.43
GPHN-213ENST00000556501 hCG_1984214I3L0E3 225 aa6.1□□□□□ -1.43
GPHN-213ENST00000556501 LAD1O00515 517 aa6.1□□□□□ -1.43
GPHN-213ENST00000556501 CYTH3O43739 400 aa6.1□□□□□ -1.43
GPHN-213ENST00000556501 MFAP3LO75121 409 aa6.1□□□□□ -1.43
GPHN-213ENST00000556501 MYL1P05976 194 aa6.1□□□□□ -1.43
GPHN-213ENST00000556501 GYS1P13807 737 aa6.1□□□□□ -1.43
GPHN-213ENST00000556501 SMARCA1P28370 1054 aa6.1□□□□□ -1.43
GPHN-213ENST00000556501 CASP1P29466 404 aa6.1□□□□□ -1.43
GPHN-213ENST00000556501 PRPHP41219 470 aa6.1□□□□□ -1.43
GPHN-213ENST00000556501 NOVP48745 357 aa6.1□□□□□ -1.43
GPHN-213ENST00000556501 CDK8P49336 464 aa6.1□□□□□ -1.43
GPHN-213ENST00000556501 RHBDL3P58872 404 aa6.1□□□□□ -1.43
GPHN-213ENST00000556501 ST5P78524 1137 aa6.1□□□□□ -1.43
GPHN-213ENST00000556501 PAK1Q13153 545 aa6.1□□□□□ -1.43
GPHN-213ENST00000556501 ORC2Q13416 577 aaPredicted RBP6.1□□□□□ -1.43
GPHN-213ENST00000556501 CAMK2BQ13554 666 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms