RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 NELFCDQ8IXH7 590 aa16.68■□□□□ 0.26
ARHGEF40-207ENST00000556399 CNOT6LQ96LI5 555 aaKnown RBP16.68■□□□□ 0.26
ARHGEF40-207ENST00000556399 FOXN1O15353 648 aa16.68■□□□□ 0.26
ARHGEF40-207ENST00000556399 CDC27P30260 824 aa16.68■□□□□ 0.26
ARHGEF40-207ENST00000556399 ANKARQ7Z5J8 1434 aa16.68■□□□□ 0.26
ARHGEF40-207ENST00000556399 NUCKS1Q9H1E3 243 aaKnown RBP16.68■□□□□ 0.26
ARHGEF40-207ENST00000556399 EHMT1Q9H9B1 1298 aa16.68■□□□□ 0.26
ARHGEF40-207ENST00000556399 UTP11Q9Y3A2 253 aaKnown RBP16.68■□□□□ 0.26
ARHGEF40-207ENST00000556399 A0A1W2PRG0 241 aa16.68■□□□□ 0.26
ARHGEF40-207ENST00000556399 PLCG2P16885 1265 aa16.68■□□□□ 0.26
ARHGEF40-207ENST00000556399 RBM43Q6ZSC3 357 aaKnown RBP16.68■□□□□ 0.26
ARHGEF40-207ENST00000556399 LCORLQ8N3X6 602 aa16.68■□□□□ 0.26
ARHGEF40-207ENST00000556399 PAIP2Q9BPZ3 127 aaKnown RBP16.68■□□□□ 0.26
ARHGEF40-207ENST00000556399 NYXQ9GZU5 481 aa16.68■□□□□ 0.26
ARHGEF40-207ENST00000556399 PPANQ9NQ55 473 aaKnown RBP16.68■□□□□ 0.26
ARHGEF40-207ENST00000556399 KIDINS220Q9ULH0 1771 aa16.67■□□□□ 0.26
ARHGEF40-207ENST00000556399 RAD51AP2Q09MP3 1159 aa16.67■□□□□ 0.26
ARHGEF40-207ENST00000556399 DDB1Q16531 1140 aa16.67■□□□□ 0.26
ARHGEF40-207ENST00000556399 HERC4Q5GLZ8 1057 aaPredicted RBP16.67■□□□□ 0.26
ARHGEF40-207ENST00000556399 GPCPD1Q9NPB8 672 aa16.67■□□□□ 0.26
ARHGEF40-207ENST00000556399 FAM13AO94988 1023 aa16.67■□□□□ 0.26
ARHGEF40-207ENST00000556399 CASP1P29466 404 aa16.67■□□□□ 0.26
ARHGEF40-207ENST00000556399 CDC25AP30304 524 aa16.67■□□□□ 0.26
ARHGEF40-207ENST00000556399 TECP42680 631 aa16.67■□□□□ 0.26
ARHGEF40-207ENST00000556399 TRAPPC10P48553 1259 aa16.67■□□□□ 0.26
ARHGEF40-207ENST00000556399 HS2ST1Q7LGA3 356 aa16.67■□□□□ 0.26
ARHGEF40-207ENST00000556399 ENGASEQ8NFI3 743 aa16.67■□□□□ 0.26
ARHGEF40-207ENST00000556399 HEG1Q9ULI3 1381 aa16.67■□□□□ 0.26
ARHGEF40-207ENST00000556399 WDR19Q8NEZ3 1342 aa16.67■□□□□ 0.26
ARHGEF40-207ENST00000556399 CTDNEP1O95476 244 aa16.67■□□□□ 0.26
ARHGEF40-207ENST00000556399 CEP85LQ5SZL2 805 aa16.67■□□□□ 0.26
ARHGEF40-207ENST00000556399 TMOD2Q9NZR1 351 aa16.67■□□□□ 0.26
ARHGEF40-207ENST00000556399 ARPP21Q9UBL0 812 aaPredicted RBP16.67■□□□□ 0.26
ARHGEF40-207ENST00000556399 VWDEQ8N2E2 1590 aa16.67■□□□□ 0.26
ARHGEF40-207ENST00000556399 VIMP08670 466 aaKnown RBP16.67■□□□□ 0.26
ARHGEF40-207ENST00000556399 SLC39A2Q9NP94 309 aa16.67■□□□□ 0.26
ARHGEF40-207ENST00000556399 ADGRG1Q9Y653 693 aa16.67■□□□□ 0.26
ARHGEF40-207ENST00000556399 MRPL12P52815 198 aaKnown RBP16.66■□□□□ 0.26
ARHGEF40-207ENST00000556399 C2orf54Q08AI8 447 aa16.66■□□□□ 0.26
ARHGEF40-207ENST00000556399 TPTE2Q6XPS3 522 aa16.66■□□□□ 0.26
ARHGEF40-207ENST00000556399 METTL16Q86W50 562 aaKnown RBP16.66■□□□□ 0.26
ARHGEF40-207ENST00000556399 TEX11Q8IYF3 940 aa16.66■□□□□ 0.26
ARHGEF40-207ENST00000556399 STRBPQ96SI9 672 aaKnown RBP16.66■□□□□ 0.26
ARHGEF40-207ENST00000556399 NEDD4P46934 1319 aa16.66■□□□□ 0.26
ARHGEF40-207ENST00000556399 SETD1BQ9UPS6 1966 aaKnown RBP16.66■□□□□ 0.26
ARHGEF40-207ENST00000556399 PALLDQ8WX93 1383 aa16.66■□□□□ 0.26
ARHGEF40-207ENST00000556399 SMCO2A6NFE2 343 aa16.66■□□□□ 0.26
ARHGEF40-207ENST00000556399 TEX33O43247 280 aa16.66■□□□□ 0.26
ARHGEF40-207ENST00000556399 EPB41P11171 864 aaKnown RBP16.66■□□□□ 0.26
ARHGEF40-207ENST00000556399 CYP2C19P33261 490 aa16.66■□□□□ 0.26
ARHGEF40-207ENST00000556399 KCTD16Q68DU8 428 aa16.66■□□□□ 0.26
ARHGEF40-207ENST00000556399 REXO1Q8N1G1 1221 aaKnown RBP16.66■□□□□ 0.26
ARHGEF40-207ENST00000556399 PNMA1Q8ND90 353 aa16.66■□□□□ 0.26
ARHGEF40-207ENST00000556399 LZTS2Q9BRK4 669 aa16.66■□□□□ 0.26
ARHGEF40-207ENST00000556399 SWAP70Q9UH65 585 aa16.66■□□□□ 0.26
ARHGEF40-207ENST00000556399 MAP2P11137 1827 aaKnown RBP16.66■□□□□ 0.26
ARHGEF40-207ENST00000556399 TCP11X2Q5H9J9 407 aa16.66■□□□□ 0.26
ARHGEF40-207ENST00000556399 ZNF579Q8NAF0 562 aaKnown RBP16.66■□□□□ 0.26
ARHGEF40-207ENST00000556399 LSM14BQ9BX40 385 aaKnown RBP16.66■□□□□ 0.26
ARHGEF40-207ENST00000556399 BTG4Q9NY30 223 aa16.66■□□□□ 0.26
ARHGEF40-207ENST00000556399 PPLO60437 1756 aa16.66■□□□□ 0.26
ARHGEF40-207ENST00000556399 SPDYE3A6NKU9 549 aa16.66■□□□□ 0.26
ARHGEF40-207ENST00000556399 OR52Z1P0C646 297 aa16.66■□□□□ 0.26
ARHGEF40-207ENST00000556399 SAMM50Q9Y512 469 aa16.66■□□□□ 0.26
ARHGEF40-207ENST00000556399 RFC4P35249 363 aa16.65■□□□□ 0.26
ARHGEF40-207ENST00000556399 EFCAB13Q8IY85 973 aa16.65■□□□□ 0.26
ARHGEF40-207ENST00000556399 NAP1L3Q99457 506 aaPredicted RBP16.65■□□□□ 0.26
ARHGEF40-207ENST00000556399 SEMA3EO15041 775 aa16.65■□□□□ 0.26
ARHGEF40-207ENST00000556399 MTF1Q14872 753 aa16.65■□□□□ 0.26
ARHGEF40-207ENST00000556399 CCDC77Q9BR77 488 aa16.65■□□□□ 0.26
ARHGEF40-207ENST00000556399 VIRMAQ69YN4 1812 aaKnown RBP16.65■□□□□ 0.26
ARHGEF40-207ENST00000556399 ADCY7P51828 1080 aa16.65■□□□□ 0.26
ARHGEF40-207ENST00000556399 BIN2Q9UBW5 565 aaPredicted RBP16.65■□□□□ 0.26
ARHGEF40-207ENST00000556399 SOS2Q07890 1332 aaPredicted RBP16.65■□□□□ 0.26
ARHGEF40-207ENST00000556399 STK36Q9NRP7 1315 aa16.65■□□□□ 0.26
ARHGEF40-207ENST00000556399 CTNNA1P35221 906 aaKnown RBP16.65■□□□□ 0.26
ARHGEF40-207ENST00000556399 RABL6Q3YEC7 729 aaPredicted RBP16.65■□□□□ 0.26
ARHGEF40-207ENST00000556399 PEX26Q7Z412 305 aa16.65■□□□□ 0.26
ARHGEF40-207ENST00000556399 DAAM2Q86T65 1068 aa16.65■□□□□ 0.26
ARHGEF40-207ENST00000556399 RETREG2Q8NC44 543 aa16.65■□□□□ 0.26
ARHGEF40-207ENST00000556399 RASGRP4Q8TDF6 673 aa16.65■□□□□ 0.26
ARHGEF40-207ENST00000556399 KCNK9Q9NPC2 374 aa16.65■□□□□ 0.26
ARHGEF40-207ENST00000556399 ABHD10Q9NUJ1 306 aa16.65■□□□□ 0.26
ARHGEF40-207ENST00000556399 CCDC87Q9NVE4 849 aa16.65■□□□□ 0.26
ARHGEF40-207ENST00000556399 UBN2Q6ZU65 1347 aa16.65■□□□□ 0.26
ARHGEF40-207ENST00000556399 DEPDC5O75140 1603 aa16.64■□□□□ 0.25
ARHGEF40-207ENST00000556399 EIF6P56537 245 aaKnown RBP16.64■□□□□ 0.25
ARHGEF40-207ENST00000556399 GUCY2DQ02846 1103 aa16.64■□□□□ 0.25
ARHGEF40-207ENST00000556399 CALCOCO2Q13137 446 aa16.64■□□□□ 0.25
ARHGEF40-207ENST00000556399 KRT71Q3SY84 523 aa16.64■□□□□ 0.25
ARHGEF40-207ENST00000556399 HOOK3Q86VS8 718 aa16.64■□□□□ 0.25
ARHGEF40-207ENST00000556399 KCNK3O14649 394 aa16.64■□□□□ 0.25
ARHGEF40-207ENST00000556399 FDPSP14324 419 aaKnown RBP16.64■□□□□ 0.25
ARHGEF40-207ENST00000556399 MTMR3Q13615 1198 aa16.64■□□□□ 0.25
ARHGEF40-207ENST00000556399 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.64■□□□□ 0.25
ARHGEF40-207ENST00000556399 AXIN2Q9Y2T1 843 aa16.64■□□□□ 0.25
ARHGEF40-207ENST00000556399 FLOT1O75955 427 aa16.64■□□□□ 0.25
ARHGEF40-207ENST00000556399 CTNNA2P26232 953 aa16.64■□□□□ 0.25
ARHGEF40-207ENST00000556399 CHRNDQ07001 517 aa16.64■□□□□ 0.25
ARHGEF40-207ENST00000556399 DHTKD1Q96HY7 919 aaPredicted RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms