RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 C9IYK1 514 aa8.56□□□□□ -1.04
PRPF39-209ENST00000556353 C1QTNF9P0C862 333 aa8.56□□□□□ -1.04
PRPF39-209ENST00000556353 GUCY2CP25092 1073 aa8.56□□□□□ -1.04
PRPF39-209ENST00000556353 PDE6BP35913 854 aa8.56□□□□□ -1.04
PRPF39-209ENST00000556353 ZPBP2Q6X784 338 aa8.56□□□□□ -1.04
PRPF39-209ENST00000556353 SHISA4Q96DD7 197 aa8.56□□□□□ -1.04
PRPF39-209ENST00000556353 TOX2Q96NM4 488 aa8.56□□□□□ -1.04
PRPF39-209ENST00000556353 CRBNQ96SW2 442 aa8.56□□□□□ -1.04
PRPF39-209ENST00000556353 KRT1P04264 644 aa8.55□□□□□ -1.04
PRPF39-209ENST00000556353 BMP8BP34820 402 aa8.55□□□□□ -1.04
PRPF39-209ENST00000556353 TDRD10Q5VZ19 366 aaKnown RBP8.55□□□□□ -1.04
PRPF39-209ENST00000556353 UNC5AQ6ZN44 842 aa8.55□□□□□ -1.04
PRPF39-209ENST00000556353 CCDC81Q6ZN84 652 aa8.55□□□□□ -1.04
PRPF39-209ENST00000556353 RUFY4Q6ZNE9 571 aa8.55□□□□□ -1.04
PRPF39-209ENST00000556353 ZNF605Q86T29 641 aa8.55□□□□□ -1.04
PRPF39-209ENST00000556353 LSRQ86X29 649 aaPredicted RBP8.55□□□□□ -1.04
PRPF39-209ENST00000556353 HHIPL1Q96JK4 782 aa8.55□□□□□ -1.04
PRPF39-209ENST00000556353 FCRL2Q96LA5 508 aaPredicted RBP8.55□□□□□ -1.04
PRPF39-209ENST00000556353 DSCC1Q9BVC3 393 aa8.55□□□□□ -1.04
PRPF39-209ENST00000556353 GINM1Q9NU53 330 aa8.55□□□□□ -1.04
PRPF39-209ENST00000556353 TNFRSF10DQ9UBN6 386 aa8.55□□□□□ -1.04
PRPF39-209ENST00000556353 NOTOA8MTQ0 251 aa8.54□□□□□ -1.04
PRPF39-209ENST00000556353 NRDCO43847 1150 aa8.54□□□□□ -1.04
PRPF39-209ENST00000556353 GSNP06396 782 aa8.54□□□□□ -1.04
PRPF39-209ENST00000556353 CTSKP43235 329 aa8.54□□□□□ -1.04
PRPF39-209ENST00000556353 GALK1P51570 392 aa8.54□□□□□ -1.04
PRPF39-209ENST00000556353 HDLBPQ00341 1268 aaKnown RBP8.54□□□□□ -1.04
PRPF39-209ENST00000556353 CRTC3Q6UUV7 619 aa8.54□□□□□ -1.04
PRPF39-209ENST00000556353 NLRX1Q86UT6 975 aa8.54□□□□□ -1.04
PRPF39-209ENST00000556353 NT5DC4Q86YG4 428 aa8.54□□□□□ -1.04
PRPF39-209ENST00000556353 KCNN1Q92952 543 aa8.54□□□□□ -1.04
PRPF39-209ENST00000556353 GPRASP2Q96D09 838 aa8.54□□□□□ -1.04
PRPF39-209ENST00000556353 CDADC1Q9BWV3 514 aa8.54□□□□□ -1.04
PRPF39-209ENST00000556353 EFR3BQ9Y2G0 817 aa8.54□□□□□ -1.04
PRPF39-209ENST00000556353 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.54□□□□□ -1.04
PRPF39-209ENST00000556353 TCAF2A6NFQ2 919 aa8.53□□□□□ -1.04
PRPF39-209ENST00000556353 ETV2O00321 342 aaPredicted RBP8.53□□□□□ -1.04
PRPF39-209ENST00000556353 SHOXO15266 292 aa8.53□□□□□ -1.04
PRPF39-209ENST00000556353 ZNF205O95201 554 aa8.53□□□□□ -1.04
PRPF39-209ENST00000556353 GLDCP23378 1020 aa8.53□□□□□ -1.04
PRPF39-209ENST00000556353 RTP1P59025 263 aa8.53□□□□□ -1.04
PRPF39-209ENST00000556353 ZYXQ15942 572 aaKnown RBP8.53□□□□□ -1.04
PRPF39-209ENST00000556353 ANKRD39Q53RE8 183 aa8.53□□□□□ -1.04
PRPF39-209ENST00000556353 ATG14Q6ZNE5 492 aa8.53□□□□□ -1.04
PRPF39-209ENST00000556353 PPFIBP1Q86W92 1011 aa8.53□□□□□ -1.04
PRPF39-209ENST00000556353 CILP2Q8IUL8 1156 aa8.53□□□□□ -1.04
PRPF39-209ENST00000556353 SIRT2Q8IXJ6 389 aa8.53□□□□□ -1.04
PRPF39-209ENST00000556353 MED14OSP0DP75 135 aa8.52□□□□□ -1.05
PRPF39-209ENST00000556353 VAV1P15498 845 aa8.52□□□□□ -1.05
PRPF39-209ENST00000556353 SOX9P48436 509 aa8.52□□□□□ -1.05
PRPF39-209ENST00000556353 NOL9Q5SY16 702 aaKnown RBP8.52□□□□□ -1.05
PRPF39-209ENST00000556353 AXDND1Q5T1B0 1012 aaPredicted RBP8.52□□□□□ -1.05
PRPF39-209ENST00000556353 DCAF15Q66K64 600 aa8.52□□□□□ -1.05
PRPF39-209ENST00000556353 CWF19L1Q69YN2 538 aaKnown RBP8.52□□□□□ -1.05
PRPF39-209ENST00000556353 ZSCAN18Q8TBC5 510 aaPredicted RBP8.52□□□□□ -1.05
PRPF39-209ENST00000556353 RASGRP4Q8TDF6 673 aa8.52□□□□□ -1.05
PRPF39-209ENST00000556353 CRTAC1Q9NQ79 661 aa8.52□□□□□ -1.05
PRPF39-209ENST00000556353 OR14I1A6ND48 311 aa8.51□□□□□ -1.05
PRPF39-209ENST00000556353 FADS2P1A8MWK0 482 aa8.51□□□□□ -1.05
PRPF39-209ENST00000556353 PEX10O60683 326 aa8.51□□□□□ -1.05
PRPF39-209ENST00000556353 TP53P04637 393 aaPredicted RBP8.51□□□□□ -1.05
PRPF39-209ENST00000556353 EIF6P56537 245 aaKnown RBP8.51□□□□□ -1.05
PRPF39-209ENST00000556353 KRTAP19-4Q3LI73 84 aa8.51□□□□□ -1.05
PRPF39-209ENST00000556353 ADGRF1Q5T601 910 aa8.51□□□□□ -1.05
PRPF39-209ENST00000556353 C9orf131Q5VYM1 1079 aa8.51□□□□□ -1.05
PRPF39-209ENST00000556353 MCOLN1Q9GZU1 580 aa8.51□□□□□ -1.05
PRPF39-209ENST00000556353 ZNF552Q9H707 407 aaPredicted RBP8.51□□□□□ -1.05
PRPF39-209ENST00000556353 AP5S1Q9NUS5 200 aa8.51□□□□□ -1.05
PRPF39-209ENST00000556353 FAM86C1Q9NVL1 165 aa8.51□□□□□ -1.05
PRPF39-209ENST00000556353 ERVK13-1Q9NX77 482 aa8.51□□□□□ -1.05
PRPF39-209ENST00000556353 KIAA1522Q9P206 1035 aaPredicted RBP8.51□□□□□ -1.05
PRPF39-209ENST00000556353 GPR55Q9Y2T6 319 aaPredicted RBP8.51□□□□□ -1.05
PRPF39-209ENST00000556353 SLC12A7Q9Y666 1083 aa8.51□□□□□ -1.05
PRPF39-209ENST00000556353 NPIPB6E9PJ23 425 aa8.5□□□□□ -1.05
PRPF39-209ENST00000556353 SEMA7AO75326 666 aa8.5□□□□□ -1.05
PRPF39-209ENST00000556353 EFEMP2O95967 443 aa8.5□□□□□ -1.05
PRPF39-209ENST00000556353 CFPP27918 469 aa8.5□□□□□ -1.05
PRPF39-209ENST00000556353 TMEM132EQ6IEE7 984 aa8.5□□□□□ -1.05
PRPF39-209ENST00000556353 GALNT18Q6P9A2 607 aa8.5□□□□□ -1.05
PRPF39-209ENST00000556353 LRRC56Q8IYG6 542 aaPredicted RBP8.5□□□□□ -1.05
PRPF39-209ENST00000556353 GP6Q9HCN6 339 aa8.5□□□□□ -1.05
PRPF39-209ENST00000556353 CD320Q9NPF0 282 aa8.5□□□□□ -1.05
PRPF39-209ENST00000556353 ZNF214Q9UL59 606 aaPredicted RBP8.5□□□□□ -1.05
PRPF39-209ENST00000556353 TAF6LQ9Y6J9 622 aa8.5□□□□□ -1.05
PRPF39-209ENST00000556353 MYOCOSA0A1B0GUC4 107 aa8.49□□□□□ -1.05
PRPF39-209ENST00000556353 WTIPA6NIX2 430 aaPredicted RBP8.49□□□□□ -1.05
PRPF39-209ENST00000556353 PNLIPP16233 465 aa8.49□□□□□ -1.05
PRPF39-209ENST00000556353 GJA8P48165 433 aa8.49□□□□□ -1.05
PRPF39-209ENST00000556353 ZNF445P59923 1031 aa8.49□□□□□ -1.05
PRPF39-209ENST00000556353 KCNA10Q16322 511 aa8.49□□□□□ -1.05
PRPF39-209ENST00000556353 OR6P1Q8NGX9 317 aa8.49□□□□□ -1.05
PRPF39-209ENST00000556353 BRF1Q92994 677 aa8.49□□□□□ -1.05
PRPF39-209ENST00000556353 PLCD4Q9BRC7 762 aa8.49□□□□□ -1.05
PRPF39-209ENST00000556353 SRRTQ9BXP5 876 aaKnown RBP8.49□□□□□ -1.05
PRPF39-209ENST00000556353 FHOD1Q9Y613 1164 aa8.49□□□□□ -1.05
PRPF39-209ENST00000556353 UNCXA6NJT0 531 aa8.48□□□□□ -1.05
PRPF39-209ENST00000556353 ITGA4P13612 1032 aa8.48□□□□□ -1.05
PRPF39-209ENST00000556353 CD247P20963 164 aa8.48□□□□□ -1.05
PRPF39-209ENST00000556353 DLG4P78352 724 aa8.48□□□□□ -1.05
PRPF39-209ENST00000556353 TCEAL1Q15170 157 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms