RNA–Protein interactions for RNA: ENST00000556342.1

SYNE2-221, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5

Gene SYNE2, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-221ENST00000556342 TTF1Q15361 905 aaPredicted RBP12.97□□□□□ -0.33
SYNE2-221ENST00000556342 SHHQ15465 462 aa12.97□□□□□ -0.33
SYNE2-221ENST00000556342 TRIM60Q495X7 471 aa12.97□□□□□ -0.33
SYNE2-221ENST00000556342 KIAA1755Q5JYT7 1200 aa12.97□□□□□ -0.33
SYNE2-221ENST00000556342 C9orf50Q5SZB4 431 aa12.97□□□□□ -0.33
SYNE2-221ENST00000556342 CEP85Q6P2H3 762 aa12.97□□□□□ -0.33
SYNE2-221ENST00000556342 TMEM179Q6ZVK1 233 aa12.97□□□□□ -0.33
SYNE2-221ENST00000556342 ERC1Q8IUD2 1116 aa12.97□□□□□ -0.33
SYNE2-221ENST00000556342 MB21D1Q8N884 522 aa12.97□□□□□ -0.33
SYNE2-221ENST00000556342 PRDM5Q9NQX1 630 aaPredicted RBP12.97□□□□□ -0.33
SYNE2-221ENST00000556342 SLC5A4Q9NY91 659 aa12.97□□□□□ -0.33
SYNE2-221ENST00000556342 EXOC6BQ9Y2D4 811 aa12.97□□□□□ -0.33
SYNE2-221ENST00000556342 PRUNE2Q8WUY3 3088 aa12.97□□□□□ -0.33
SYNE2-221ENST00000556342 PLS1Q14651 629 aa12.96□□□□□ -0.33
SYNE2-221ENST00000556342 SLC9C2Q5TAH2 1124 aa12.96□□□□□ -0.33
SYNE2-221ENST00000556342 ABRAQ8N0Z2 381 aa12.96□□□□□ -0.33
SYNE2-221ENST00000556342 SLC44A5Q8NCS7 719 aa12.96□□□□□ -0.33
SYNE2-221ENST00000556342 CDX2Q99626 313 aaPredicted RBP12.96□□□□□ -0.33
SYNE2-221ENST00000556342 MROH8Q9H579 483 aa12.96□□□□□ -0.33
SYNE2-221ENST00000556342 DCP1AQ9NPI6 582 aaPredicted RBP12.96□□□□□ -0.33
SYNE2-221ENST00000556342 PDLIM7Q9NR12 457 aa12.96□□□□□ -0.33
SYNE2-221ENST00000556342 KIAA1468Q9P260 1216 aa12.96□□□□□ -0.33
SYNE2-221ENST00000556342 LTBP2Q14767 1821 aa12.95□□□□□ -0.34
SYNE2-221ENST00000556342 ZNF532Q9HCE3 1301 aa12.95□□□□□ -0.34
SYNE2-221ENST00000556342 FLOT1O75955 427 aa12.95□□□□□ -0.34
SYNE2-221ENST00000556342 CYP2D6P10635 497 aa12.95□□□□□ -0.34
SYNE2-221ENST00000556342 ADCYAP1R1P41586 468 aa12.95□□□□□ -0.34
SYNE2-221ENST00000556342 LRRC41Q15345 812 aa12.95□□□□□ -0.34
SYNE2-221ENST00000556342 FAM47AQ5JRC9 791 aa12.95□□□□□ -0.34
SYNE2-221ENST00000556342 PRAMEF19Q5SWL8 479 aa12.95□□□□□ -0.34
SYNE2-221ENST00000556342 NCAPG2Q86XI2 1143 aa12.95□□□□□ -0.34
SYNE2-221ENST00000556342 CLEC10AQ8IUN9 316 aa12.95□□□□□ -0.34
SYNE2-221ENST00000556342 SIAH1Q8IUQ4 282 aa12.95□□□□□ -0.34
SYNE2-221ENST00000556342 LCORLQ8N3X6 602 aa12.95□□□□□ -0.34
SYNE2-221ENST00000556342 SDR42E1Q8WUS8 393 aa12.95□□□□□ -0.34
SYNE2-221ENST00000556342 BADQ92934 168 aa12.95□□□□□ -0.34
SYNE2-221ENST00000556342 ATG4CQ96DT6 458 aa12.95□□□□□ -0.34
SYNE2-221ENST00000556342 MAML3Q96JK9 1138 aa12.95□□□□□ -0.34
SYNE2-221ENST00000556342 IL1RAPL2Q9NP60 686 aa12.95□□□□□ -0.34
SYNE2-221ENST00000556342 SWAP70Q9UH65 585 aa12.95□□□□□ -0.34
SYNE2-221ENST00000556342 TMX2Q9Y320 296 aa12.95□□□□□ -0.34
SYNE2-221ENST00000556342 A0A0G2JMZ2 1700 aa12.95□□□□□ -0.34
SYNE2-221ENST00000556342 RLFQ13129 1914 aa12.94□□□□□ -0.34
SYNE2-221ENST00000556342 NAV1Q8NEY1 1877 aa12.94□□□□□ -0.34
SYNE2-221ENST00000556342 TCRBV5S4A2TA0A5A2 114 aa12.94□□□□□ -0.34
SYNE2-221ENST00000556342 TRIM43BA6NCK2 446 aa12.94□□□□□ -0.34
SYNE2-221ENST00000556342 FCER1AP12319 257 aa12.94□□□□□ -0.34
SYNE2-221ENST00000556342 ICA1Q05084 483 aa12.94□□□□□ -0.34
SYNE2-221ENST00000556342 C1orf53Q5VUE5 145 aa12.94□□□□□ -0.34
SYNE2-221ENST00000556342 SH3RF1Q7Z6J0 888 aa12.94□□□□□ -0.34
SYNE2-221ENST00000556342 LAPTM4BQ86VI4 370 aa12.94□□□□□ -0.34
SYNE2-221ENST00000556342 SPICE1Q8N0Z3 855 aa12.94□□□□□ -0.34
SYNE2-221ENST00000556342 FERMT2Q96AC1 680 aa12.94□□□□□ -0.34
SYNE2-221ENST00000556342 TRIM43Q96BQ3 446 aaPredicted RBP12.94□□□□□ -0.34
SYNE2-221ENST00000556342 KCTD12Q96CX2 325 aaKnown RBP12.94□□□□□ -0.34
SYNE2-221ENST00000556342 DYNLL2Q96FJ2 89 aa12.94□□□□□ -0.34
SYNE2-221ENST00000556342 SEMA6BQ9H3T3 888 aa12.94□□□□□ -0.34
SYNE2-221ENST00000556342 CDHR5Q9HBB8 845 aa12.94□□□□□ -0.34
SYNE2-221ENST00000556342 ARHGEF10LQ9HCE6 1279 aa12.94□□□□□ -0.34
SYNE2-221ENST00000556342 GOLIM4O00461 696 aa12.93□□□□□ -0.34
SYNE2-221ENST00000556342 WDR46O15213 610 aaKnown RBP12.93□□□□□ -0.34
SYNE2-221ENST00000556342 AKR1B1P15121 316 aa12.93□□□□□ -0.34
SYNE2-221ENST00000556342 SMAD3P84022 425 aaKnown RBP12.93□□□□□ -0.34
SYNE2-221ENST00000556342 TMEM132BQ14DG7 1078 aa12.93□□□□□ -0.34
SYNE2-221ENST00000556342 HSP90AB4PQ58FF6 505 aa12.93□□□□□ -0.34
SYNE2-221ENST00000556342 MAFAQ8NHW3 353 aaPredicted RBP12.93□□□□□ -0.34
SYNE2-221ENST00000556342 RHPN1Q8TCX5 695 aa12.93□□□□□ -0.34
SYNE2-221ENST00000556342 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.93□□□□□ -0.34
SYNE2-221ENST00000556342 DNAJC2Q99543 621 aaKnown RBP12.93□□□□□ -0.34
SYNE2-221ENST00000556342 SH2D4AQ9H788 454 aa12.93□□□□□ -0.34
SYNE2-221ENST00000556342 VCPKMTQ9H867 229 aa12.93□□□□□ -0.34
SYNE2-221ENST00000556342 ARMT1Q9H993 441 aa12.93□□□□□ -0.34
SYNE2-221ENST00000556342 HCSTQ9UBK5 93 aa12.93□□□□□ -0.34
SYNE2-221ENST00000556342 NRBP1Q9UHY1 535 aa12.93□□□□□ -0.34
SYNE2-221ENST00000556342 CDH23Q9H251 3354 aa12.93□□□□□ -0.34
SYNE2-221ENST00000556342 GOLGA8CPA6NN73 597 aa12.92□□□□□ -0.34
SYNE2-221ENST00000556342 PRKAB2O43741 272 aa12.92□□□□□ -0.34
SYNE2-221ENST00000556342 SLC25A27O95847 323 aa12.92□□□□□ -0.34
SYNE2-221ENST00000556342 PRSS12P56730 875 aa12.92□□□□□ -0.34
SYNE2-221ENST00000556342 TLE2Q04725 743 aa12.92□□□□□ -0.34
SYNE2-221ENST00000556342 CLASRPQ8N2M8 674 aaKnown RBP12.92□□□□□ -0.34
SYNE2-221ENST00000556342 MYLIPQ8WY64 445 aa12.92□□□□□ -0.34
SYNE2-221ENST00000556342 CCDC17Q96LX7 622 aa12.92□□□□□ -0.34
SYNE2-221ENST00000556342 MMP19Q99542 508 aa12.92□□□□□ -0.34
SYNE2-221ENST00000556342 TTYH1Q9H313 450 aaPredicted RBP12.92□□□□□ -0.34
SYNE2-221ENST00000556342 XPNPEP3Q9NQH7 507 aa12.92□□□□□ -0.34
SYNE2-221ENST00000556342 PHF24Q9UPV7 400 aa12.92□□□□□ -0.34
SYNE2-221ENST00000556342 RARBP10826 455 aa12.91□□□□□ -0.34
SYNE2-221ENST00000556342 ITGB8P26012 769 aa12.91□□□□□ -0.34
SYNE2-221ENST00000556342 RNF180Q86T96 592 aa12.91□□□□□ -0.34
SYNE2-221ENST00000556342 RIOX2Q8IUF8 465 aa12.91□□□□□ -0.34
SYNE2-221ENST00000556342 ATP8A2Q9NTI2 1148 aa12.91□□□□□ -0.34
SYNE2-221ENST00000556342 ADAMTS5Q9UNA0 930 aa12.91□□□□□ -0.34
SYNE2-221ENST00000556342 TACC3Q9Y6A5 838 aa12.91□□□□□ -0.34
SYNE2-221ENST00000556342 ROBO3Q96MS0 1386 aa12.91□□□□□ -0.34
SYNE2-221ENST00000556342 TTC28Q96AY4 2481 aa12.9□□□□□ -0.34
SYNE2-221ENST00000556342 SPTBN5Q9NRC6 3674 aaKnown RBP12.9□□□□□ -0.34
SYNE2-221ENST00000556342 CYP2D7A0A087X1C5 515 aa12.9□□□□□ -0.34
SYNE2-221ENST00000556342 SMIM22K7EJ46 135 aa12.9□□□□□ -0.34
SYNE2-221ENST00000556342 KIAA0355O15063 1070 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms