RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 TAF7LQ5H9L4 462 aa8.67□□□□□ -1.02
ATXN3-236ENST00000556220 HHIPL2Q6UWX4 724 aa8.67□□□□□ -1.02
ATXN3-236ENST00000556220 LINS1Q8NG48 757 aa8.67□□□□□ -1.02
ATXN3-236ENST00000556220 ZNF594Q96JF6 807 aaPredicted RBP8.67□□□□□ -1.02
ATXN3-236ENST00000556220 RPAP1Q9BWH6 1393 aaPredicted RBP8.67□□□□□ -1.02
ATXN3-236ENST00000556220 STK31Q9BXU1 1019 aa8.67□□□□□ -1.02
ATXN3-236ENST00000556220 SEMA6BQ9H3T3 888 aa8.67□□□□□ -1.02
ATXN3-236ENST00000556220 GJD2Q9UKL4 321 aa8.67□□□□□ -1.02
ATXN3-236ENST00000556220 AFG3L2Q9Y4W6 797 aa8.67□□□□□ -1.02
ATXN3-236ENST00000556220 ZHX2Q9Y6X8 837 aa8.67□□□□□ -1.02
ATXN3-236ENST00000556220 PFASO15067 1338 aa8.66□□□□□ -1.02
ATXN3-236ENST00000556220 MX2P20592 715 aa8.66□□□□□ -1.02
ATXN3-236ENST00000556220 TSGA10IPQ3SY00 556 aa8.66□□□□□ -1.02
ATXN3-236ENST00000556220 GNASQ5JWF2 1037 aa8.66□□□□□ -1.02
ATXN3-236ENST00000556220 TMEM214Q6NUQ4 689 aaKnown RBP8.66□□□□□ -1.02
ATXN3-236ENST00000556220 LMBR1LQ6UX01 489 aa8.66□□□□□ -1.02
ATXN3-236ENST00000556220 GADL1Q6ZQY3 521 aa8.66□□□□□ -1.02
ATXN3-236ENST00000556220 VPS37DQ86XT2 251 aa8.66□□□□□ -1.02
ATXN3-236ENST00000556220 ANKRD13CQ8N6S4 541 aa8.66□□□□□ -1.02
ATXN3-236ENST00000556220 SMCR8Q8TEV9 937 aaPredicted RBP8.66□□□□□ -1.02
ATXN3-236ENST00000556220 DNAAF4Q8WXU2 420 aa8.66□□□□□ -1.02
ATXN3-236ENST00000556220 IQSEC3Q9UPP2 1182 aaPredicted RBP8.66□□□□□ -1.02
ATXN3-236ENST00000556220 SUGT1Q9Y2Z0 365 aa8.66□□□□□ -1.02
ATXN3-236ENST00000556220 DNMT3AQ9Y6K1 912 aaPredicted RBP8.66□□□□□ -1.02
ATXN3-236ENST00000556220 DOCK3Q8IZD9 2030 aa8.66□□□□□ -1.02
ATXN3-236ENST00000556220 ALPK3Q96L96 1907 aa8.65□□□□□ -1.02
ATXN3-236ENST00000556220 PHF20L1A8MW92 1017 aa8.65□□□□□ -1.02
ATXN3-236ENST00000556220 FRAT2O75474 233 aaPredicted RBP8.65□□□□□ -1.02
ATXN3-236ENST00000556220 COL6A1P12109 1028 aa8.65□□□□□ -1.02
ATXN3-236ENST00000556220 PTPRAP18433 802 aa8.65□□□□□ -1.02
ATXN3-236ENST00000556220 TCP10Q12799 353 aa8.65□□□□□ -1.02
ATXN3-236ENST00000556220 LBRQ14739 615 aaKnown RBP8.65□□□□□ -1.02
ATXN3-236ENST00000556220 WDR43Q15061 677 aaKnown RBP eCLIP8.65□□□□□ -1.02
ATXN3-236ENST00000556220 FAM110CQ1W6H9 321 aa8.65□□□□□ -1.02
ATXN3-236ENST00000556220 EPHA10Q5JZY3 1008 aa8.65□□□□□ -1.02
ATXN3-236ENST00000556220 RNF135Q8IUD6 432 aa8.65□□□□□ -1.02
ATXN3-236ENST00000556220 PICK1Q9NRD5 415 aa8.65□□□□□ -1.02
ATXN3-236ENST00000556220 RAPGEFL1Q9UHV5 662 aa8.65□□□□□ -1.02
ATXN3-236ENST00000556220 MYH3P11055 1940 aa8.64□□□□□ -1.03
ATXN3-236ENST00000556220 SPEF2Q9C093 1822 aa8.64□□□□□ -1.03
ATXN3-236ENST00000556220 MAST3O60307 1309 aa8.64□□□□□ -1.03
ATXN3-236ENST00000556220 PLA2G5P39877 138 aa8.64□□□□□ -1.03
ATXN3-236ENST00000556220 PHKA2P46019 1235 aa8.64□□□□□ -1.03
ATXN3-236ENST00000556220 NFIAQ12857 509 aa8.64□□□□□ -1.03
ATXN3-236ENST00000556220 FLIIQ13045 1269 aa8.64□□□□□ -1.03
ATXN3-236ENST00000556220 LRRC26Q2I0M4 334 aa8.64□□□□□ -1.03
ATXN3-236ENST00000556220 CAVIN4Q5BKX8 364 aa8.64□□□□□ -1.03
ATXN3-236ENST00000556220 MAP3K21Q5TCX8 1036 aa8.64□□□□□ -1.03
ATXN3-236ENST00000556220 SCYL3Q8IZE3 742 aa8.64□□□□□ -1.03
ATXN3-236ENST00000556220 ACDQ96AP0 544 aa8.64□□□□□ -1.03
ATXN3-236ENST00000556220 LBHD1Q9BQE6 289 aaPredicted RBP8.64□□□□□ -1.03
ATXN3-236ENST00000556220 PUS3Q9BZE2 481 aaKnown RBP8.64□□□□□ -1.03
ATXN3-236ENST00000556220 VAC14Q08AM6 782 aa8.63□□□□□ -1.03
ATXN3-236ENST00000556220 FKBP5Q13451 457 aaPredicted RBP8.63□□□□□ -1.03
ATXN3-236ENST00000556220 CDC42EP5Q6NZY7 148 aa8.63□□□□□ -1.03
ATXN3-236ENST00000556220 ZFPM1Q8IX07 1006 aa8.63□□□□□ -1.03
ATXN3-236ENST00000556220 MYLIPQ8WY64 445 aa8.63□□□□□ -1.03
ATXN3-236ENST00000556220 FAM122AQ96E09 287 aa8.63□□□□□ -1.03
ATXN3-236ENST00000556220 GDPD2Q9HCC8 539 aa8.63□□□□□ -1.03
ATXN3-236ENST00000556220 PHF24Q9UPV7 400 aa8.63□□□□□ -1.03
ATXN3-236ENST00000556220 AGTPBP1Q9UPW5 1226 aa8.63□□□□□ -1.03
ATXN3-236ENST00000556220 COL2A1P02458 1487 aaPredicted RBP8.63□□□□□ -1.03
ATXN3-236ENST00000556220 ARAP2Q8WZ64 1704 aa8.63□□□□□ -1.03
ATXN3-236ENST00000556220 MROH5Q6ZUA9 1318 aa8.62□□□□□ -1.03
ATXN3-236ENST00000556220 TRIM75PA6NK02 468 aa8.62□□□□□ -1.03
ATXN3-236ENST00000556220 APAF1O14727 1248 aa8.62□□□□□ -1.03
ATXN3-236ENST00000556220 CTNND1O60716 968 aaKnown RBP8.62□□□□□ -1.03
ATXN3-236ENST00000556220 IGHA1P01876 353 aa8.62□□□□□ -1.03
ATXN3-236ENST00000556220 CYP2B6P20813 491 aa8.62□□□□□ -1.03
ATXN3-236ENST00000556220 MAP2K3P46734 347 aa8.62□□□□□ -1.03
ATXN3-236ENST00000556220 GCLCP48506 637 aaPredicted RBP8.62□□□□□ -1.03
ATXN3-236ENST00000556220 FOXK2Q01167 660 aa8.62□□□□□ -1.03
ATXN3-236ENST00000556220 MAP7D1Q3KQU3 841 aa8.62□□□□□ -1.03
ATXN3-236ENST00000556220 C4orf17Q53FE4 359 aa8.62□□□□□ -1.03
ATXN3-236ENST00000556220 TREML2Q5T2D2 321 aa8.62□□□□□ -1.03
ATXN3-236ENST00000556220 BEND3Q5T5X7 828 aa8.62□□□□□ -1.03
ATXN3-236ENST00000556220 PGBD3Q8N328 593 aa8.62□□□□□ -1.03
ATXN3-236ENST00000556220 BEND7Q8N7W2 519 aaPredicted RBP8.62□□□□□ -1.03
ATXN3-236ENST00000556220 NEDD1Q8NHV4 660 aa8.62□□□□□ -1.03
ATXN3-236ENST00000556220 RHBDD1Q8TEB9 315 aa8.62□□□□□ -1.03
ATXN3-236ENST00000556220 TRIB2Q92519 343 aa8.62□□□□□ -1.03
ATXN3-236ENST00000556220 TTYH1Q9H313 450 aaPredicted RBP8.62□□□□□ -1.03
ATXN3-236ENST00000556220 ETNK1Q9HBU6 452 aa8.62□□□□□ -1.03
ATXN3-236ENST00000556220 GPAMQ9HCL2 828 aa8.62□□□□□ -1.03
ATXN3-236ENST00000556220 DAGLAQ9Y4D2 1042 aa8.62□□□□□ -1.03
ATXN3-236ENST00000556220 DNAH12Q6ZR08 3092 aa8.62□□□□□ -1.03
ATXN3-236ENST00000556220 PIEZO1Q92508 2521 aa8.61□□□□□ -1.03
ATXN3-236ENST00000556220 THBS1P07996 1170 aa8.61□□□□□ -1.03
ATXN3-236ENST00000556220 XRCC5P13010 732 aaKnown RBP8.61□□□□□ -1.03
ATXN3-236ENST00000556220 FOSL2P15408 326 aa8.61□□□□□ -1.03
ATXN3-236ENST00000556220 SOX11P35716 441 aa8.61□□□□□ -1.03
ATXN3-236ENST00000556220 ABL2P42684 1182 aa8.61□□□□□ -1.03
ATXN3-236ENST00000556220 SMAD3P84022 425 aaKnown RBP8.61□□□□□ -1.03
ATXN3-236ENST00000556220 TWISTNBQ3B726 338 aaPredicted RBP8.61□□□□□ -1.03
ATXN3-236ENST00000556220 OXLD1Q5BKU9 147 aa8.61□□□□□ -1.03
ATXN3-236ENST00000556220 USP40Q9NVE5 1235 aa8.61□□□□□ -1.03
ATXN3-236ENST00000556220 LRRFIP2Q9Y608 721 aaKnown RBP8.61□□□□□ -1.03
ATXN3-236ENST00000556220 ATRNL1Q5VV63 1379 aa8.61□□□□□ -1.03
ATXN3-236ENST00000556220 MGAMO43451 1857 aa8.6□□□□□ -1.03
ATXN3-236ENST00000556220 GRM8O00222 908 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms