RNA–Protein interactions for RNA: ENST00000556098.1

CHGA-205, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 638 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-205ENST00000556098 SMAD3P84022 425 aaKnown RBP13.05□□□□□ -0.32
CHGA-205ENST00000556098 TLE2Q04725 743 aa13.05□□□□□ -0.32
CHGA-205ENST00000556098 MAP3K12Q12852 859 aa13.05□□□□□ -0.32
CHGA-205ENST00000556098 TTC6Q86TZ1 520 aa13.05□□□□□ -0.32
CHGA-205ENST00000556098 INTS4Q96HW7 963 aaKnown RBP13.05□□□□□ -0.32
CHGA-205ENST00000556098 KIAA1683Q9H0B3 1180 aa13.05□□□□□ -0.32
CHGA-205ENST00000556098 IL25Q9H293 177 aa13.05□□□□□ -0.32
CHGA-205ENST00000556098 ALDH8A1Q9H2A2 487 aaPredicted RBP13.05□□□□□ -0.32
CHGA-205ENST00000556098 RAPGEFL1Q9UHV5 662 aa13.05□□□□□ -0.32
CHGA-205ENST00000556098 SNX14Q9Y5W7 946 aa13.05□□□□□ -0.32
CHGA-205ENST00000556098 ZMYM6O95789 1325 aa13.05□□□□□ -0.32
CHGA-205ENST00000556098 SEPT4O43236 478 aa13.04□□□□□ -0.32
CHGA-205ENST00000556098 CLTBP09497 229 aa13.04□□□□□ -0.32
CHGA-205ENST00000556098 PDIA4P13667 645 aaKnown RBP13.04□□□□□ -0.32
CHGA-205ENST00000556098 COL9A1P20849 921 aa13.04□□□□□ -0.32
CHGA-205ENST00000556098 NEK4P51957 841 aa13.04□□□□□ -0.32
CHGA-205ENST00000556098 ANKRD1Q15327 319 aa13.04□□□□□ -0.32
CHGA-205ENST00000556098 LRRC41Q15345 812 aa13.04□□□□□ -0.32
CHGA-205ENST00000556098 VPS53Q5VIR6 699 aa13.04□□□□□ -0.32
CHGA-205ENST00000556098 TATDN1Q6P1N9 297 aa13.04□□□□□ -0.32
CHGA-205ENST00000556098 CCDC129Q6ZRS4 1044 aa13.04□□□□□ -0.32
CHGA-205ENST00000556098 METTL16Q86W50 562 aaKnown RBP13.04□□□□□ -0.32
CHGA-205ENST00000556098 SPATC1LQ9H0A9 340 aa13.04□□□□□ -0.32
CHGA-205ENST00000556098 ANTXR1Q9H6X2 564 aa13.04□□□□□ -0.32
CHGA-205ENST00000556098 XPNPEP3Q9NQH7 507 aa13.04□□□□□ -0.32
CHGA-205ENST00000556098 SLC5A4Q9NY91 659 aa13.04□□□□□ -0.32
CHGA-205ENST00000556098 PRUNE2Q8WUY3 3088 aa13.04□□□□□ -0.32
CHGA-205ENST00000556098 COBLO75128 1261 aa13.03□□□□□ -0.32
CHGA-205ENST00000556098 PGK1P00558 417 aa13.03□□□□□ -0.32
CHGA-205ENST00000556098 HOXC6P09630 235 aa13.03□□□□□ -0.32
CHGA-205ENST00000556098 ADD2P35612 726 aa13.03□□□□□ -0.32
CHGA-205ENST00000556098 PLCD1P51178 756 aa13.03□□□□□ -0.32
CHGA-205ENST00000556098 EPHB4P54760 987 aa13.03□□□□□ -0.32
CHGA-205ENST00000556098 COG2Q14746 738 aa13.03□□□□□ -0.32
CHGA-205ENST00000556098 CREB3L3Q68CJ9 461 aa13.03□□□□□ -0.32
CHGA-205ENST00000556098 SPICE1Q8N0Z3 855 aa13.03□□□□□ -0.32
CHGA-205ENST00000556098 USP38Q8NB14 1042 aa13.03□□□□□ -0.32
CHGA-205ENST00000556098 LENG1Q96BZ8 264 aaPredicted RBP13.03□□□□□ -0.32
CHGA-205ENST00000556098 CHMP4CQ96CF2 233 aa13.03□□□□□ -0.32
CHGA-205ENST00000556098 ANP32EQ9BTT0 268 aa13.03□□□□□ -0.32
CHGA-205ENST00000556098 CYP46A1Q9Y6A2 500 aa13.03□□□□□ -0.32
CHGA-205ENST00000556098 TMEM265A0A087WTH1 108 aa13.02□□□□□ -0.33
CHGA-205ENST00000556098 FLOT1O75955 427 aa13.02□□□□□ -0.33
CHGA-205ENST00000556098 RARBP10826 455 aa13.02□□□□□ -0.33
CHGA-205ENST00000556098 DNAJB2P25686 324 aa13.02□□□□□ -0.33
CHGA-205ENST00000556098 SHMT1P34896 483 aa13.02□□□□□ -0.33
CHGA-205ENST00000556098 SLC4A3P48751 1232 aa13.02□□□□□ -0.33
CHGA-205ENST00000556098 PTH1RQ03431 593 aa13.02□□□□□ -0.33
CHGA-205ENST00000556098 EVX2Q03828 476 aa13.02□□□□□ -0.33
CHGA-205ENST00000556098 FPGSQ05932 587 aa13.02□□□□□ -0.33
CHGA-205ENST00000556098 GRIN2CQ14957 1233 aa13.02□□□□□ -0.33
CHGA-205ENST00000556098 OLFML2BQ68BL8 750 aa13.02□□□□□ -0.33
CHGA-205ENST00000556098 ZNF589Q86UQ0 364 aaPredicted RBP13.02□□□□□ -0.33
CHGA-205ENST00000556098 CLEC10AQ8IUN9 316 aa13.02□□□□□ -0.33
CHGA-205ENST00000556098 ATG4CQ96DT6 458 aa13.02□□□□□ -0.33
CHGA-205ENST00000556098 ZSCAN31Q96LW9 406 aaPredicted RBP13.02□□□□□ -0.33
CHGA-205ENST00000556098 MMP19Q99542 508 aa13.02□□□□□ -0.33
CHGA-205ENST00000556098 ZSWIM6Q9HCJ5 1215 aa13.02□□□□□ -0.33
CHGA-205ENST00000556098 SH2B1Q9NRF2 756 aaPredicted RBP13.02□□□□□ -0.33
CHGA-205ENST00000556098 TMEM39AQ9NV64 488 aa13.02□□□□□ -0.33
CHGA-205ENST00000556098 MAGEB6P1A0A0J9YX57 407 aa13.01□□□□□ -0.33
CHGA-205ENST00000556098 TNFRSF10AO00220 468 aa13.01□□□□□ -0.33
CHGA-205ENST00000556098 SLC27A2O14975 620 aa13.01□□□□□ -0.33
CHGA-205ENST00000556098 PGK2P07205 417 aa13.01□□□□□ -0.33
CHGA-205ENST00000556098 GNAT2P19087 354 aa13.01□□□□□ -0.33
CHGA-205ENST00000556098 PTMSP20962 102 aa13.01□□□□□ -0.33
CHGA-205ENST00000556098 ITGB8P26012 769 aa13.01□□□□□ -0.33
CHGA-205ENST00000556098 GUCY1A2P33402 732 aa13.01□□□□□ -0.33
CHGA-205ENST00000556098 DDIT3P35638 169 aa13.01□□□□□ -0.33
CHGA-205ENST00000556098 NUCB2P80303 420 aa13.01□□□□□ -0.33
CHGA-205ENST00000556098 CUL4AQ13619 759 aa13.01□□□□□ -0.33
CHGA-205ENST00000556098 CCDC85BQ15834 202 aaPredicted RBP13.01□□□□□ -0.33
CHGA-205ENST00000556098 TJAP1Q5JTD0 557 aa13.01□□□□□ -0.33
CHGA-205ENST00000556098 LBX2Q6XYB7 198 aa13.01□□□□□ -0.33
CHGA-205ENST00000556098 RNF180Q86T96 592 aa13.01□□□□□ -0.33
CHGA-205ENST00000556098 MAML3Q96JK9 1138 aa13.01□□□□□ -0.33
CHGA-205ENST00000556098 EHD4Q9H223 541 aa13.01□□□□□ -0.33
CHGA-205ENST00000556098 MCM9Q9NXL9 1143 aa13.01□□□□□ -0.33
CHGA-205ENST00000556098 HOXC10Q9NYD6 342 aa13.01□□□□□ -0.33
CHGA-205ENST00000556098 TACC3Q9Y6A5 838 aa13.01□□□□□ -0.33
CHGA-205ENST00000556098 A0A1W2PQ45 241 aaPredicted RBP13□□□□□ -0.33
CHGA-205ENST00000556098 A0A1W2PQY0 241 aa13□□□□□ -0.33
CHGA-205ENST00000556098 A0A1W2PRG0 241 aa13□□□□□ -0.33
CHGA-205ENST00000556098 STRNO43815 780 aa13□□□□□ -0.33
CHGA-205ENST00000556098 CYP2D6P10635 497 aa13□□□□□ -0.33
CHGA-205ENST00000556098 FCER1AP12319 257 aa13□□□□□ -0.33
CHGA-205ENST00000556098 CASTP20810 708 aaKnown RBP13□□□□□ -0.33
CHGA-205ENST00000556098 SNX17Q15036 470 aa13□□□□□ -0.33
CHGA-205ENST00000556098 BLOC1S2Q6QNY1 142 aa13□□□□□ -0.33
CHGA-205ENST00000556098 RUFY3Q7L099 469 aa13□□□□□ -0.33
CHGA-205ENST00000556098 SLC44A5Q8NCS7 719 aa13□□□□□ -0.33
CHGA-205ENST00000556098 VTI1AQ96AJ9 217 aa13□□□□□ -0.33
CHGA-205ENST00000556098 TIFAQ96CG3 184 aa13□□□□□ -0.33
CHGA-205ENST00000556098 TTC14Q96N46 770 aa13□□□□□ -0.33
CHGA-205ENST00000556098 GAS2L1Q99501 681 aaPredicted RBP13□□□□□ -0.33
CHGA-205ENST00000556098 ARHGEF10LQ9HCE6 1279 aa13□□□□□ -0.33
CHGA-205ENST00000556098 WDR19Q8NEZ3 1342 aa12.99□□□□□ -0.33
CHGA-205ENST00000556098 HSPD1P10809 573 aaKnown RBP12.99□□□□□ -0.33
CHGA-205ENST00000556098 TAL1P17542 331 aaPredicted RBP12.99□□□□□ -0.33
CHGA-205ENST00000556098 IGFBP4P22692 258 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms