RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 FANCBQ8NB91 859 aa8.89□□□□□ -0.99
TDP1-214ENST00000556063 ZNF274Q96GC6 653 aaPredicted RBP8.89□□□□□ -0.99
TDP1-214ENST00000556063 NUP88Q99567 741 aaPredicted RBP8.89□□□□□ -0.99
TDP1-214ENST00000556063 P2RX7Q99572 595 aaKnown RBP8.89□□□□□ -0.99
TDP1-214ENST00000556063 SENP2Q9HC62 589 aa8.89□□□□□ -0.99
TDP1-214ENST00000556063 RNF186Q9NXI6 227 aa8.89□□□□□ -0.99
TDP1-214ENST00000556063 PPP1R9AQ9ULJ8 1098 aa8.89□□□□□ -0.99
TDP1-214ENST00000556063 THSD7BQ9C0I4 1608 aa8.89□□□□□ -0.99
TDP1-214ENST00000556063 BAZ2BQ9UIF8 2168 aaKnown RBP8.89□□□□□ -0.99
TDP1-214ENST00000556063 FRMPD2Q68DX3 1309 aaPredicted RBP8.88□□□□□ -0.99
TDP1-214ENST00000556063 PALM3A6NDB9 673 aaPredicted RBP8.88□□□□□ -0.99
TDP1-214ENST00000556063 KLRF2D3W0D1 207 aa8.88□□□□□ -0.99
TDP1-214ENST00000556063 CPLX1O14810 134 aa8.88□□□□□ -0.99
TDP1-214ENST00000556063 TLR2O60603 784 aa8.88□□□□□ -0.99
TDP1-214ENST00000556063 TRPA1O75762 1119 aa8.88□□□□□ -0.99
TDP1-214ENST00000556063 CYP2C8P10632 490 aa8.88□□□□□ -0.99
TDP1-214ENST00000556063 METAP2P50579 478 aaKnown RBP eCLIP8.88□□□□□ -0.99
TDP1-214ENST00000556063 AK2P54819 239 aa8.88□□□□□ -0.99
TDP1-214ENST00000556063 HERVK_113P62684 666 aa8.88□□□□□ -0.99
TDP1-214ENST00000556063 CCNA1P78396 465 aa8.88□□□□□ -0.99
TDP1-214ENST00000556063 CRHR2Q13324 411 aa8.88□□□□□ -0.99
TDP1-214ENST00000556063 COL9A3Q14050 684 aaPredicted RBP8.88□□□□□ -0.99
TDP1-214ENST00000556063 TOB2Q14106 344 aaPredicted RBP8.88□□□□□ -0.99
TDP1-214ENST00000556063 SYDE2Q5VT97 1194 aa8.88□□□□□ -0.99
TDP1-214ENST00000556063 BTNL9Q6UXG8 535 aa8.88□□□□□ -0.99
TDP1-214ENST00000556063 LBX2Q6XYB7 198 aa8.88□□□□□ -0.99
TDP1-214ENST00000556063 CCAR1Q8IX12 1150 aaKnown RBP8.88□□□□□ -0.99
TDP1-214ENST00000556063 JMYQ8N9B5 988 aa8.88□□□□□ -0.99
TDP1-214ENST00000556063 KIFC2Q96AC6 838 aa8.88□□□□□ -0.99
TDP1-214ENST00000556063 ZSCAN31Q96LW9 406 aaPredicted RBP8.88□□□□□ -0.99
TDP1-214ENST00000556063 KIF2CQ99661 725 aa8.88□□□□□ -0.99
TDP1-214ENST00000556063 MYL10Q9BUA6 226 aa8.88□□□□□ -0.99
TDP1-214ENST00000556063 CFHR5Q9BXR6 569 aa8.88□□□□□ -0.99
TDP1-214ENST00000556063 SLKQ9H2G2 1235 aaPredicted RBP8.88□□□□□ -0.99
TDP1-214ENST00000556063 WBP1LQ9NX94 342 aa8.88□□□□□ -0.99
TDP1-214ENST00000556063 BRPF3Q9ULD4 1205 aa8.88□□□□□ -0.99
TDP1-214ENST00000556063 LIMCH1Q9UPQ0 1083 aa8.88□□□□□ -0.99
TDP1-214ENST00000556063 RABGAP1Q9Y3P9 1069 aa8.88□□□□□ -0.99
TDP1-214ENST00000556063 SPDYE16A6NNV3 312 aaPredicted RBP8.87□□□□□ -0.99
TDP1-214ENST00000556063 VWA5AO00534 786 aa8.87□□□□□ -0.99
TDP1-214ENST00000556063 GOLGA8HP0CJ92 632 aa8.87□□□□□ -0.99
TDP1-214ENST00000556063 PDIA3P30101 505 aaKnown RBP8.87□□□□□ -0.99
TDP1-214ENST00000556063 COPB2P35606 906 aa8.87□□□□□ -0.99
TDP1-214ENST00000556063 OAZ1P54368 228 aa8.87□□□□□ -0.99
TDP1-214ENST00000556063 AKAP17AQ02040 695 aaKnown RBP8.87□□□□□ -0.99
TDP1-214ENST00000556063 KIF22Q14807 665 aa8.87□□□□□ -0.99
TDP1-214ENST00000556063 ARHGEF6Q15052 776 aa8.87□□□□□ -0.99
TDP1-214ENST00000556063 FAM110CQ1W6H9 321 aa8.87□□□□□ -0.99
TDP1-214ENST00000556063 GPRC5AQ8NFJ5 357 aa8.87□□□□□ -0.99
TDP1-214ENST00000556063 ATG4CQ96DT6 458 aa8.87□□□□□ -0.99
TDP1-214ENST00000556063 PAGR1Q9BTK6 254 aa8.87□□□□□ -0.99
TDP1-214ENST00000556063 SH2B1Q9NRF2 756 aaPredicted RBP8.87□□□□□ -0.99
TDP1-214ENST00000556063 FBXO28Q9NVF7 368 aa8.87□□□□□ -0.99
TDP1-214ENST00000556063 RBM27Q9P2N5 1060 aaKnown RBP8.87□□□□□ -0.99
TDP1-214ENST00000556063 SEC63Q9UGP8 760 aaKnown RBP8.87□□□□□ -0.99
TDP1-214ENST00000556063 MAD2L2Q9UI95 211 aa8.87□□□□□ -0.99
TDP1-214ENST00000556063 PRR12Q9ULL5 1215 aa8.87□□□□□ -0.99
TDP1-214ENST00000556063 CDKL5O76039 1030 aa8.86□□□□□ -0.99
TDP1-214ENST00000556063 TBC1D8O95759 1140 aa8.86□□□□□ -0.99
TDP1-214ENST00000556063 RXRAP19793 462 aa8.86□□□□□ -0.99
TDP1-214ENST00000556063 SLC16A2P36021 539 aa8.86□□□□□ -0.99
TDP1-214ENST00000556063 PLS1Q14651 629 aa8.86□□□□□ -0.99
TDP1-214ENST00000556063 NOM1Q5C9Z4 860 aaKnown RBP8.86□□□□□ -0.99
TDP1-214ENST00000556063 TTBK2Q6IQ55 1244 aa8.86□□□□□ -0.99
TDP1-214ENST00000556063 TMTC3Q6ZXV5 915 aa8.86□□□□□ -0.99
TDP1-214ENST00000556063 NOL8Q76FK4 1167 aaKnown RBP8.86□□□□□ -0.99
TDP1-214ENST00000556063 RAB11FIP4Q86YS3 637 aa8.86□□□□□ -0.99
TDP1-214ENST00000556063 CCDC144CPQ8IYA2 1237 aa8.86□□□□□ -0.99
TDP1-214ENST00000556063 TRIM22Q8IYM9 498 aa8.86□□□□□ -0.99
TDP1-214ENST00000556063 STAG2Q8N3U4 1231 aa8.86□□□□□ -0.99
TDP1-214ENST00000556063 ANKRD13CQ8N6S4 541 aa8.86□□□□□ -0.99
TDP1-214ENST00000556063 RRP36Q96EU6 259 aaKnown RBP8.86□□□□□ -0.99
TDP1-214ENST00000556063 SPZ1Q9BXG8 430 aa8.86□□□□□ -0.99
TDP1-214ENST00000556063 TEX13BQ9BXU2 312 aa8.86□□□□□ -0.99
TDP1-214ENST00000556063 UBA5Q9GZZ9 404 aa8.86□□□□□ -0.99
TDP1-214ENST00000556063 CWC22Q9HCG8 908 aaKnown RBP8.86□□□□□ -0.99
TDP1-214ENST00000556063 VAT1LQ9HCJ6 419 aa8.86□□□□□ -0.99
TDP1-214ENST00000556063 MORF4L1Q9UBU8 362 aa8.86□□□□□ -0.99
TDP1-214ENST00000556063 CPA4Q9UI42 421 aa8.86□□□□□ -0.99
TDP1-214ENST00000556063 ADAMTS5Q9UNA0 930 aa8.86□□□□□ -0.99
TDP1-214ENST00000556063 MYH6P13533 1939 aa8.86□□□□□ -0.99
TDP1-214ENST00000556063 GPR25O00155 361 aa8.85□□□□□ -0.99
TDP1-214ENST00000556063 ATP2A1O14983 1001 aa8.85□□□□□ -0.99
TDP1-214ENST00000556063 PFKFB2O60825 505 aa8.85□□□□□ -0.99
TDP1-214ENST00000556063 SLC25A27O95847 323 aa8.85□□□□□ -0.99
TDP1-214ENST00000556063 BCRP11274 1271 aa8.85□□□□□ -0.99
TDP1-214ENST00000556063 STAT3P40763 770 aa8.85□□□□□ -0.99
TDP1-214ENST00000556063 ERVK-9P63128 1117 aa8.85□□□□□ -0.99
TDP1-214ENST00000556063 ERVK-24P63145 666 aa8.85□□□□□ -0.99
TDP1-214ENST00000556063 CCT2P78371 535 aaKnown RBP8.85□□□□□ -0.99
TDP1-214ENST00000556063 SP3Q02447 781 aa8.85□□□□□ -0.99
TDP1-214ENST00000556063 STK3Q13188 491 aa8.85□□□□□ -0.99
TDP1-214ENST00000556063 CDC37Q16543 378 aaPredicted RBP8.85□□□□□ -0.99
TDP1-214ENST00000556063 TKFCQ3LXA3 575 aa8.85□□□□□ -0.99
TDP1-214ENST00000556063 C17orf99Q6UX52 265 aa8.85□□□□□ -0.99
TDP1-214ENST00000556063 ADGRF4Q8IZF3 695 aa8.85□□□□□ -0.99
TDP1-214ENST00000556063 CPXCR1Q8N123 301 aa8.85□□□□□ -0.99
TDP1-214ENST00000556063 LARP6Q9BRS8 491 aaKnown RBP8.85□□□□□ -0.99
TDP1-214ENST00000556063 SPATC1LQ9H0A9 340 aa8.85□□□□□ -0.99
TDP1-214ENST00000556063 RANBP17Q9H2T7 1088 aaKnown RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms