RNA–Protein interactions for RNA: ENST00000555964.5

XRCC3-215, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-215ENST00000555964 ZBED4O75132 1171 aa20.25■□□□□ 0.83
XRCC3-215ENST00000555964 ZNF865P0CJ78 1059 aaPredicted RBP20.25■□□□□ 0.83
XRCC3-215ENST00000555964 RAG1P15918 1043 aa20.25■□□□□ 0.83
XRCC3-215ENST00000555964 FAM184BQ9ULE4 1060 aa20.25■□□□□ 0.83
XRCC3-215ENST00000555964 TMEM265A0A087WTH1 108 aa20.24■□□□□ 0.83
XRCC3-215ENST00000555964 TRIM43BA6NCK2 446 aa20.24■□□□□ 0.83
XRCC3-215ENST00000555964 F5H6K3 240 aa20.24■□□□□ 0.83
XRCC3-215ENST00000555964 KIAA0355O15063 1070 aa20.24■□□□□ 0.83
XRCC3-215ENST00000555964 PQBP1O60828 265 aaKnown RBP20.24■□□□□ 0.83
XRCC3-215ENST00000555964 NDUFB10O96000 172 aa20.24■□□□□ 0.83
XRCC3-215ENST00000555964 CHGBP05060 677 aa20.24■□□□□ 0.83
XRCC3-215ENST00000555964 RASA1P20936 1047 aa20.24■□□□□ 0.83
XRCC3-215ENST00000555964 TDO2P48775 406 aa20.24■□□□□ 0.83
XRCC3-215ENST00000555964 KLRC3Q07444 240 aa20.24■□□□□ 0.83
XRCC3-215ENST00000555964 C9orf50Q5SZB4 431 aa20.24■□□□□ 0.83
XRCC3-215ENST00000555964 ZNF467Q7Z7K2 595 aaPredicted RBP20.24■□□□□ 0.83
XRCC3-215ENST00000555964 TRIM43Q96BQ3 446 aaPredicted RBP20.24■□□□□ 0.83
XRCC3-215ENST00000555964 TOX2Q96NM4 488 aa20.24■□□□□ 0.83
XRCC3-215ENST00000555964 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.24■□□□□ 0.83
XRCC3-215ENST00000555964 SPC25Q9HBM1 224 aa20.24■□□□□ 0.83
XRCC3-215ENST00000555964 STARD7Q9NQZ5 370 aa20.24■□□□□ 0.83
XRCC3-215ENST00000555964 FBXO40Q9UH90 709 aa20.24■□□□□ 0.83
XRCC3-215ENST00000555964 MROH7Q68CQ1 1323 aa20.24■□□□□ 0.83
XRCC3-215ENST00000555964 GSG1L2A8MUP6 293 aa20.23■□□□□ 0.83
XRCC3-215ENST00000555964 DCDC2CA8MYV0 355 aa20.23■□□□□ 0.83
XRCC3-215ENST00000555964 MAMDC4Q6UXC1 1216 aa20.23■□□□□ 0.83
XRCC3-215ENST00000555964 SH3RF1Q7Z6J0 888 aa20.23■□□□□ 0.83
XRCC3-215ENST00000555964 ZNF444Q8N0Y2 327 aaPredicted RBP20.23■□□□□ 0.83
XRCC3-215ENST00000555964 RNPC3Q96LT9 517 aaKnown RBP20.23■□□□□ 0.83
XRCC3-215ENST00000555964 FEM1BQ9UK73 627 aa20.23■□□□□ 0.83
XRCC3-215ENST00000555964 RNF113AO15541 343 aaKnown RBP20.22■□□□□ 0.83
XRCC3-215ENST00000555964 SMARCA5O60264 1052 aaPredicted RBP20.22■□□□□ 0.83
XRCC3-215ENST00000555964 ADAMTS4O75173 837 aa20.22■□□□□ 0.83
XRCC3-215ENST00000555964 SLC3A2P08195 630 aaKnown RBP20.22■□□□□ 0.83
XRCC3-215ENST00000555964 FDX1P10109 184 aa20.22■□□□□ 0.83
XRCC3-215ENST00000555964 TAL1P17542 331 aaPredicted RBP20.22■□□□□ 0.83
XRCC3-215ENST00000555964 OAZ1P54368 228 aa20.22■□□□□ 0.83
XRCC3-215ENST00000555964 FPGSQ05932 587 aa20.22■□□□□ 0.83
XRCC3-215ENST00000555964 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.22■□□□□ 0.835e-6■■■■■ 45.5
XRCC3-215ENST00000555964 ANKRD33Q7Z3H0 272 aa20.22■□□□□ 0.83
XRCC3-215ENST00000555964 PCSK9Q8NBP7 692 aaKnown RBP20.22■□□□□ 0.83
XRCC3-215ENST00000555964 NUP88Q99567 741 aaPredicted RBP20.22■□□□□ 0.83
XRCC3-215ENST00000555964 CDX2Q99626 313 aaPredicted RBP20.22■□□□□ 0.83
XRCC3-215ENST00000555964 NACAP1Q9BZK3 213 aa20.22■□□□□ 0.83
XRCC3-215ENST00000555964 SEMA6BQ9H3T3 888 aa20.22■□□□□ 0.83
XRCC3-215ENST00000555964 TMEM39AQ9NV64 488 aa20.22■□□□□ 0.83
XRCC3-215ENST00000555964 ZHX1Q9UKY1 873 aaPredicted RBP20.22■□□□□ 0.83
XRCC3-215ENST00000555964 SYNRGQ9UMZ2 1314 aa20.22■□□□□ 0.83
XRCC3-215ENST00000555964 GPAA1O43292 621 aa20.21■□□□□ 0.83
XRCC3-215ENST00000555964 DUSP11O75319 330 aaKnown RBP20.21■□□□□ 0.83
XRCC3-215ENST00000555964 TTLL1O95922 423 aa20.21■□□□□ 0.83
XRCC3-215ENST00000555964 APPP05067 770 aa20.21■□□□□ 0.83
XRCC3-215ENST00000555964 ACLYP53396 1101 aa20.21■□□□□ 0.83
XRCC3-215ENST00000555964 PPP4R3BQ5MIZ7 849 aa20.21■□□□□ 0.83
XRCC3-215ENST00000555964 CCDC174Q6PII3 467 aa20.21■□□□□ 0.83
XRCC3-215ENST00000555964 ANKRD35Q8N283 1001 aa20.21■□□□□ 0.83
XRCC3-215ENST00000555964 CHST13Q8NET6 341 aa20.21■□□□□ 0.83
XRCC3-215ENST00000555964 GLT1D1Q96MS3 346 aa20.21■□□□□ 0.83
XRCC3-215ENST00000555964 CLIP2Q9UDT6 1046 aa20.21■□□□□ 0.83
XRCC3-215ENST00000555964 A0A0C4DFX4 3053 aa20.21■□□□□ 0.83
XRCC3-215ENST00000555964 DNAJC25-GNG10A0A024R161 153 aa20.2■□□□□ 0.82
XRCC3-215ENST00000555964 CST5P28325 142 aaPredicted RBP20.2■□□□□ 0.82
XRCC3-215ENST00000555964 CPXCR1Q8N123 301 aa20.2■□□□□ 0.82
XRCC3-215ENST00000555964 STK11IPQ8N1F8 1099 aa20.2■□□□□ 0.82
XRCC3-215ENST00000555964 GMCL1P1Q8NEA9 526 aa20.2■□□□□ 0.82
XRCC3-215ENST00000555964 KLHDC9Q8NEP7 349 aa20.2■□□□□ 0.82
XRCC3-215ENST00000555964 MAFAQ8NHW3 353 aaPredicted RBP20.2■□□□□ 0.82
XRCC3-215ENST00000555964 OSBP2Q969R2 916 aa20.2■□□□□ 0.82
XRCC3-215ENST00000555964 MKL1Q969V6 931 aa20.2■□□□□ 0.82
XRCC3-215ENST00000555964 KIFC2Q96AC6 838 aa20.2■□□□□ 0.82
XRCC3-215ENST00000555964 ABHD16BQ9H3Z7 469 aa20.2■□□□□ 0.82
XRCC3-215ENST00000555964 SLC38A10Q9HBR0 1119 aa20.2■□□□□ 0.82
XRCC3-215ENST00000555964 ELP1O95163 1332 aa20.2■□□□□ 0.82
XRCC3-215ENST00000555964 PLIN4Q96Q06 1357 aa20.2■□□□□ 0.82
XRCC3-215ENST00000555964 IGKV6D-41A0A0C4DH26 115 aa20.19■□□□□ 0.82
XRCC3-215ENST00000555964 PDE4BQ07343 736 aa20.19■□□□□ 0.82
XRCC3-215ENST00000555964 CEP95Q96GE4 821 aa20.19■□□□□ 0.82
XRCC3-215ENST00000555964 MTMR4Q9NYA4 1195 aa20.19■□□□□ 0.82
XRCC3-215ENST00000555964 ERC2O15083 957 aa20.18■□□□□ 0.82
XRCC3-215ENST00000555964 SNAI1O95863 264 aaPredicted RBP20.18■□□□□ 0.82
XRCC3-215ENST00000555964 SLC4A3P48751 1232 aa20.18■□□□□ 0.82
XRCC3-215ENST00000555964 ACVR2BQ13705 512 aa20.18■□□□□ 0.82
XRCC3-215ENST00000555964 KCNA10Q16322 511 aa20.18■□□□□ 0.82
XRCC3-215ENST00000555964 LENG1Q96BZ8 264 aaPredicted RBP20.18■□□□□ 0.82
XRCC3-215ENST00000555964 COL25A1Q9BXS0 654 aaPredicted RBP20.18■□□□□ 0.82
XRCC3-215ENST00000555964 DCTPP1Q9H773 170 aa20.18■□□□□ 0.82
XRCC3-215ENST00000555964 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.18■□□□□ 0.82
XRCC3-215ENST00000555964 RIPK3Q9Y572 518 aa20.18■□□□□ 0.82
XRCC3-215ENST00000555964 MYO9BQ13459 2157 aa20.17■□□□□ 0.82
XRCC3-215ENST00000555964 PATL2C9JE40 543 aaKnown RBP20.17■□□□□ 0.82
XRCC3-215ENST00000555964 C6orf222P0C671 652 aaPredicted RBP20.17■□□□□ 0.82
XRCC3-215ENST00000555964 TSPY3P0CV98 308 aa20.17■□□□□ 0.82
XRCC3-215ENST00000555964 TSPY8P0CW00 308 aa20.17■□□□□ 0.82
XRCC3-215ENST00000555964 BMP3P12645 472 aa20.17■□□□□ 0.82
XRCC3-215ENST00000555964 FOSL2P15408 326 aa20.17■□□□□ 0.82
XRCC3-215ENST00000555964 RAVER2Q9HCJ3 691 aaKnown RBP20.17■□□□□ 0.82
XRCC3-215ENST00000555964 EPB41L4AQ9HCS5 686 aaPredicted RBP20.17■□□□□ 0.82
XRCC3-215ENST00000555964 ISY1Q9ULR0 285 aaKnown RBP20.17■□□□□ 0.82
XRCC3-215ENST00000555964 TTC41PQ6P2S7 1318 aa20.17■□□□□ 0.82
XRCC3-215ENST00000555964 A0A0U1RQG5 324 aaPredicted RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms