RNA–Protein interactions for RNA: ENST00000555740.5

PCNX4-210, Transcript of pecanex 4, humanhuman

TSL 2

Gene PCNX4, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-210ENST00000555740 CATIPQ7Z7H3 387 aa9.08□□□□□ -0.96
PCNX4-210ENST00000555740 NSUN7Q8NE18 718 aaKnown RBP9.08□□□□□ -0.96
PCNX4-210ENST00000555740 SLKQ9H2G2 1235 aaPredicted RBP9.08□□□□□ -0.96
PCNX4-210ENST00000555740 KANSL2Q9H9L4 492 aa9.08□□□□□ -0.96
PCNX4-210ENST00000555740 SLC12A7Q9Y666 1083 aa9.08□□□□□ -0.96
PCNX4-210ENST00000555740 TTLL1O95922 423 aa9.08□□□□□ -0.96
PCNX4-210ENST00000555740 DNAJB2P25686 324 aa9.08□□□□□ -0.96
PCNX4-210ENST00000555740 CAP2P40123 477 aa9.08□□□□□ -0.96
PCNX4-210ENST00000555740 METAP2P50579 478 aaKnown RBP eCLIP9.08□□□□□ -0.96
PCNX4-210ENST00000555740 SUPT20HL1Q3ZLR7 823 aa9.08□□□□□ -0.96
PCNX4-210ENST00000555740 STK11IPQ8N1F8 1099 aa9.08□□□□□ -0.96
PCNX4-210ENST00000555740 GMCL1P1Q8NEA9 526 aa9.08□□□□□ -0.96
PCNX4-210ENST00000555740 DCPSQ96C86 337 aaKnown RBP9.08□□□□□ -0.96
PCNX4-210ENST00000555740 TMEM47Q9BQJ4 181 aa9.08□□□□□ -0.96
PCNX4-210ENST00000555740 ZKSCAN3Q9BRR0 538 aa9.08□□□□□ -0.96
PCNX4-210ENST00000555740 FAM196BA6NMK8 535 aa9.07□□□□□ -0.96
PCNX4-210ENST00000555740 GOLGA8AA7E2F4 631 aa9.07□□□□□ -0.96
PCNX4-210ENST00000555740 HOXA2O43364 376 aa9.07□□□□□ -0.96
PCNX4-210ENST00000555740 DHX16O60231 1041 aaKnown RBP9.07□□□□□ -0.96
PCNX4-210ENST00000555740 CTNND1O60716 968 aaKnown RBP9.07□□□□□ -0.96
PCNX4-210ENST00000555740 CTDNEP1O95476 244 aa9.07□□□□□ -0.96
PCNX4-210ENST00000555740 HMGN5P82970 282 aaKnown RBP9.07□□□□□ -0.96
PCNX4-210ENST00000555740 NTRK3Q16288 839 aa9.07□□□□□ -0.96
PCNX4-210ENST00000555740 MAP3K11Q16584 847 aa9.07□□□□□ -0.96
PCNX4-210ENST00000555740 RTN1Q16799 776 aa9.07□□□□□ -0.96
PCNX4-210ENST00000555740 NBPF12Q5TAG4 269 aaPredicted RBP9.07□□□□□ -0.96
PCNX4-210ENST00000555740 NFXL1Q6ZNB6 911 aa9.07□□□□□ -0.96
PCNX4-210ENST00000555740 NOL8Q76FK4 1167 aaKnown RBP9.07□□□□□ -0.96
PCNX4-210ENST00000555740 CCDC83Q8IWF9 413 aa9.07□□□□□ -0.96
PCNX4-210ENST00000555740 KAT14Q9H8E8 782 aa9.07□□□□□ -0.96
PCNX4-210ENST00000555740 CCDC196A0A1B0GTZ2 297 aa9.07□□□□□ -0.96
PCNX4-210ENST00000555740 UNCXA6NJT0 531 aa9.07□□□□□ -0.96
PCNX4-210ENST00000555740 CDKL5O76039 1030 aa9.07□□□□□ -0.96
PCNX4-210ENST00000555740 JAG1P78504 1218 aa9.07□□□□□ -0.96
PCNX4-210ENST00000555740 FUT2Q10981 343 aa9.07□□□□□ -0.96
PCNX4-210ENST00000555740 SYNE3Q6ZMZ3 975 aa9.07□□□□□ -0.96
PCNX4-210ENST00000555740 TMTC3Q6ZXV5 915 aa9.07□□□□□ -0.96
PCNX4-210ENST00000555740 LDHDQ86WU2 507 aa9.07□□□□□ -0.96
PCNX4-210ENST00000555740 SULF1Q8IWU6 871 aa9.07□□□□□ -0.96
PCNX4-210ENST00000555740 NECAB1Q8N987 351 aa9.07□□□□□ -0.96
PCNX4-210ENST00000555740 PNMA1Q8ND90 353 aa9.07□□□□□ -0.96
PCNX4-210ENST00000555740 SEPT9Q9UHD8 586 aaPredicted RBP9.07□□□□□ -0.96
PCNX4-210ENST00000555740 RLFQ13129 1914 aa9.07□□□□□ -0.96
PCNX4-210ENST00000555740 CFAP99D6REC4 459 aa9.06□□□□□ -0.96
PCNX4-210ENST00000555740 GH2P01242 217 aa9.06□□□□□ -0.96
PCNX4-210ENST00000555740 ASNSP08243 561 aa9.06□□□□□ -0.96
PCNX4-210ENST00000555740 SLURP2P0DP57 97 aa9.06□□□□□ -0.96
PCNX4-210ENST00000555740 VEGFAP15692 232 aaPredicted RBP9.06□□□□□ -0.96
PCNX4-210ENST00000555740 IFNAR1P17181 557 aa9.06□□□□□ -0.96
PCNX4-210ENST00000555740 SMARCA1P28370 1054 aa9.06□□□□□ -0.96
PCNX4-210ENST00000555740 ICA1Q05084 483 aa9.06□□□□□ -0.96
PCNX4-210ENST00000555740 SIAH1Q8IUQ4 282 aa9.06□□□□□ -0.96
PCNX4-210ENST00000555740 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.06□□□□□ -0.96
PCNX4-210ENST00000555740 DCAF4Q8WV16 495 aa9.06□□□□□ -0.96
PCNX4-210ENST00000555740 CDCA5Q96FF9 252 aa9.06□□□□□ -0.96
PCNX4-210ENST00000555740 UCN2Q96RP3 112 aa9.06□□□□□ -0.96
PCNX4-210ENST00000555740 LZTS2Q9BRK4 669 aa9.06□□□□□ -0.96
PCNX4-210ENST00000555740 CABP5Q9NP86 173 aa9.06□□□□□ -0.96
PCNX4-210ENST00000555740 CNTNAP5Q8WYK1 1306 aa9.06□□□□□ -0.96
PCNX4-210ENST00000555740 PTPDC1A2A3K4 754 aa9.06□□□□□ -0.96
PCNX4-210ENST00000555740 PALM3A6NDB9 673 aaPredicted RBP9.06□□□□□ -0.96
PCNX4-210ENST00000555740 ADM5C9JUS6 153 aa9.06□□□□□ -0.96
PCNX4-210ENST00000555740 GDF11O95390 407 aa9.06□□□□□ -0.96
PCNX4-210ENST00000555740 CDC27P30260 824 aa9.06□□□□□ -0.96
PCNX4-210ENST00000555740 KIF5BP33176 963 aa9.06□□□□□ -0.96
PCNX4-210ENST00000555740 ASPRV1Q53RT3 343 aa9.06□□□□□ -0.96
PCNX4-210ENST00000555740 KRT26Q7Z3Y9 468 aa9.06□□□□□ -0.96
PCNX4-210ENST00000555740 NBPF11Q86T75 865 aa9.06□□□□□ -0.96
PCNX4-210ENST00000555740 MICU3Q86XE3 530 aa9.06□□□□□ -0.96
PCNX4-210ENST00000555740 SCYL3Q8IZE3 742 aa9.06□□□□□ -0.96
PCNX4-210ENST00000555740 FAM177A1Q8N128 213 aaPredicted RBP9.06□□□□□ -0.96
PCNX4-210ENST00000555740 FANCBQ8NB91 859 aa9.06□□□□□ -0.96
PCNX4-210ENST00000555740 GMCL1Q96IK5 515 aa9.06□□□□□ -0.96
PCNX4-210ENST00000555740 SH2D4AQ9H788 454 aa9.06□□□□□ -0.96
PCNX4-210ENST00000555740 FMNL1O95466 1100 aaPredicted RBP9.05□□□□□ -0.96
PCNX4-210ENST00000555740 FDX1P10109 184 aa9.05□□□□□ -0.96
PCNX4-210ENST00000555740 SLC4A3P48751 1232 aa9.05□□□□□ -0.96
PCNX4-210ENST00000555740 GNAQP50148 359 aa9.05□□□□□ -0.96
PCNX4-210ENST00000555740 SEPT2Q15019 361 aa9.05□□□□□ -0.96
PCNX4-210ENST00000555740 SHROOM1Q2M3G4 852 aaPredicted RBP9.05□□□□□ -0.96
PCNX4-210ENST00000555740 KLRG1Q96E93 195 aa9.05□□□□□ -0.96
PCNX4-210ENST00000555740 WDR18Q9BV38 432 aa9.05□□□□□ -0.96
PCNX4-210ENST00000555740 PDHBP11177 359 aa9.05□□□□□ -0.96
PCNX4-210ENST00000555740 EEF2P13639 858 aaKnown RBP9.05□□□□□ -0.96
PCNX4-210ENST00000555740 CPLX2Q6PUV4 134 aaKnown RBP9.05□□□□□ -0.96
PCNX4-210ENST00000555740 CDC37L1Q7L3B6 337 aa9.05□□□□□ -0.96
PCNX4-210ENST00000555740 USP48Q86UV5 1035 aa9.05□□□□□ -0.96
PCNX4-210ENST00000555740 CTCFLQ8NI51 663 aaPredicted RBP9.05□□□□□ -0.96
PCNX4-210ENST00000555740 SPZ1Q9BXG8 430 aa9.05□□□□□ -0.96
PCNX4-210ENST00000555740 RNF26Q9BY78 433 aaPredicted RBP9.05□□□□□ -0.96
PCNX4-210ENST00000555740 NCOA5Q9HCD5 579 aaKnown RBP9.05□□□□□ -0.96
PCNX4-210ENST00000555740 ARHGEF10LQ9HCE6 1279 aa9.05□□□□□ -0.96
PCNX4-210ENST00000555740 MAD2L2Q9UI95 211 aa9.05□□□□□ -0.96
PCNX4-210ENST00000555740 SMC3Q9UQE7 1217 aa9.05□□□□□ -0.96
PCNX4-210ENST00000555740 TMX2Q9Y320 296 aa9.05□□□□□ -0.96
PCNX4-210ENST00000555740 MPHOSPH10O00566 681 aaKnown RBP9.04□□□□□ -0.96
PCNX4-210ENST00000555740 STK3Q13188 491 aa9.04□□□□□ -0.96
PCNX4-210ENST00000555740 TMCO4Q5TGY1 634 aa9.04□□□□□ -0.96
PCNX4-210ENST00000555740 MYL10Q9BUA6 226 aa9.04□□□□□ -0.96
PCNX4-210ENST00000555740 CHMP5Q9NZZ3 219 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms