RNA–Protein interactions for RNA: ENST00000555617.5

ABCD4-222, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-222ENST00000555617 SMAD4Q13485 552 aaKnown RBP14.37□□□□□ -0.11
ABCD4-222ENST00000555617 LDHAL6AQ6ZMR3 332 aa14.37□□□□□ -0.11
ABCD4-222ENST00000555617 CNNM1Q9NRU3 951 aa14.37□□□□□ -0.11
ABCD4-222ENST00000555617 TIMELESSQ9UNS1 1208 aa14.37□□□□□ -0.11
ABCD4-222ENST00000555617 PI4KAP2A4QPH2 592 aa14.36□□□□□ -0.11
ABCD4-222ENST00000555617 ERCC3P19447 782 aa14.36□□□□□ -0.11
ABCD4-222ENST00000555617 GTF2F1P35269 517 aaKnown RBP eCLIP14.36□□□□□ -0.11
ABCD4-222ENST00000555617 DEFB103AP81534 67 aa14.36□□□□□ -0.11
ABCD4-222ENST00000555617 VPS37DQ86XT2 251 aa14.36□□□□□ -0.11
ABCD4-222ENST00000555617 PI4KAP1Q8N8J0 262 aa14.36□□□□□ -0.11
ABCD4-222ENST00000555617 NLRC5Q86WI3 1866 aa14.35□□□□□ -0.11
ABCD4-222ENST00000555617 MYO10Q9HD67 2058 aa14.35□□□□□ -0.11
ABCD4-222ENST00000555617 C19orf81C9J6K1 198 aa14.35□□□□□ -0.11
ABCD4-222ENST00000555617 USP17L10C9JJH3 530 aa14.35□□□□□ -0.11
ABCD4-222ENST00000555617 LINC01565O15544 149 aa14.35□□□□□ -0.11
ABCD4-222ENST00000555617 C6orf222P0C671 652 aaPredicted RBP14.35□□□□□ -0.11
ABCD4-222ENST00000555617 LBX2Q6XYB7 198 aa14.35□□□□□ -0.11
ABCD4-222ENST00000555617 NRBP1Q9UHY1 535 aa14.35□□□□□ -0.11
ABCD4-222ENST00000555617 CHMP3Q9Y3E7 222 aa14.35□□□□□ -0.11
ABCD4-222ENST00000555617 R4GN57 208 aa14.35□□□□□ -0.11
ABCD4-222ENST00000555617 DSPP15924 2871 aaKnown RBP14.34□□□□□ -0.11
ABCD4-222ENST00000555617 PFKMP08237 780 aa14.34□□□□□ -0.11
ABCD4-222ENST00000555617 ZYXQ15942 572 aaKnown RBP14.34□□□□□ -0.11
ABCD4-222ENST00000555617 TIGD5Q53EQ6 642 aa14.34□□□□□ -0.11
ABCD4-222ENST00000555617 CATSPERGQ6ZRH7 1159 aa14.34□□□□□ -0.11
ABCD4-222ENST00000555617 FBXO22Q8NEZ5 403 aa14.34□□□□□ -0.11
ABCD4-222ENST00000555617 LAS1LQ9Y4W2 734 aaKnown RBP14.34□□□□□ -0.11
ABCD4-222ENST00000555617 PGK2P07205 417 aa14.33□□□□□ -0.12
ABCD4-222ENST00000555617 CYP2C9P11712 490 aa14.33□□□□□ -0.12
ABCD4-222ENST00000555617 DMWDQ09019 674 aa14.33□□□□□ -0.12
ABCD4-222ENST00000555617 PTPN21Q16825 1174 aa14.33□□□□□ -0.12
ABCD4-222ENST00000555617 CYP2W1Q8TAV3 490 aa14.33□□□□□ -0.12
ABCD4-222ENST00000555617 HINFPQ9BQA5 517 aa14.33□□□□□ -0.12
ABCD4-222ENST00000555617 TINF2Q9BSI4 451 aa14.33□□□□□ -0.12
ABCD4-222ENST00000555617 SMOC2Q9H3U7 446 aa14.33□□□□□ -0.12
ABCD4-222ENST00000555617 STRNO43815 780 aa14.32□□□□□ -0.12
ABCD4-222ENST00000555617 PTGS1P23219 599 aa14.32□□□□□ -0.12
ABCD4-222ENST00000555617 WDR5P61964 334 aaKnown RBP14.32□□□□□ -0.12
ABCD4-222ENST00000555617 HYAL1Q12794 435 aa14.32□□□□□ -0.12
ABCD4-222ENST00000555617 TCTN1Q2MV58 587 aa14.32□□□□□ -0.12
ABCD4-222ENST00000555617 KSR2Q6VAB6 950 aa14.32□□□□□ -0.12
ABCD4-222ENST00000555617 UPF3AQ9H1J1 476 aaKnown RBP14.32□□□□□ -0.12
ABCD4-222ENST00000555617 DNAJC18Q9H819 358 aa14.32□□□□□ -0.12
ABCD4-222ENST00000555617 WDFY3Q8IZQ1 3526 aa14.32□□□□□ -0.12
ABCD4-222ENST00000555617 TRIP12Q14669 1992 aaPredicted RBP14.31□□□□□ -0.12
ABCD4-222ENST00000555617 CNOT1A5YKK6 2376 aaKnown RBP14.31□□□□□ -0.12
ABCD4-222ENST00000555617 USP17L15C9J2P7 530 aa14.31□□□□□ -0.12
ABCD4-222ENST00000555617 USP17L13C9JLJ4 530 aa14.31□□□□□ -0.12
ABCD4-222ENST00000555617 USP17L11C9JVI0 530 aa14.31□□□□□ -0.12
ABCD4-222ENST00000555617 USP17L18D6R9N7 530 aa14.31□□□□□ -0.12
ABCD4-222ENST00000555617 USP17L22D6RA61 530 aa14.31□□□□□ -0.12
ABCD4-222ENST00000555617 USP17L17D6RBQ6 530 aa14.31□□□□□ -0.12
ABCD4-222ENST00000555617 USP17L19D6RCP7 530 aa14.31□□□□□ -0.12
ABCD4-222ENST00000555617 USP17L20D6RJB6 530 aa14.31□□□□□ -0.12
ABCD4-222ENST00000555617 GDF11O95390 407 aa14.31□□□□□ -0.12
ABCD4-222ENST00000555617 ICAM3P32942 547 aa14.31□□□□□ -0.12
ABCD4-222ENST00000555617 RIPK4P57078 832 aa14.31□□□□□ -0.12
ABCD4-222ENST00000555617 BEX3Q00994 111 aa14.31□□□□□ -0.12
ABCD4-222ENST00000555617 USP17L24Q0WX57 530 aa14.31□□□□□ -0.12
ABCD4-222ENST00000555617 CXCL17Q6UXB2 119 aa14.31□□□□□ -0.12
ABCD4-222ENST00000555617 NSUN3Q9H649 340 aaKnown RBP14.31□□□□□ -0.12
ABCD4-222ENST00000555617 ITPR1Q14643 2758 aa14.31□□□□□ -0.12
ABCD4-222ENST00000555617 ACTN1P12814 892 aa14.3□□□□□ -0.12
ABCD4-222ENST00000555617 ANGPT1Q15389 498 aa14.3□□□□□ -0.12
ABCD4-222ENST00000555617 USP17L2Q6R6M4 530 aa14.3□□□□□ -0.12
ABCD4-222ENST00000555617 SPATC1LQ9H0A9 340 aa14.3□□□□□ -0.12
ABCD4-222ENST00000555617 CD207Q9UJ71 328 aa14.3□□□□□ -0.12
ABCD4-222ENST00000555617 KIF16BQ96L93 1317 aa14.3□□□□□ -0.12
ABCD4-222ENST00000555617 PARP14Q460N5 1801 aa14.29□□□□□ -0.12
ABCD4-222ENST00000555617 DUSP11O75319 330 aaKnown RBP14.29□□□□□ -0.12
ABCD4-222ENST00000555617 VCAM1P19320 739 aa14.29□□□□□ -0.12
ABCD4-222ENST00000555617 PPP2R1AP30153 589 aa14.29□□□□□ -0.12
ABCD4-222ENST00000555617 RHBDL3P58872 404 aa14.29□□□□□ -0.12
ABCD4-222ENST00000555617 PSMC6P62333 389 aa14.29□□□□□ -0.12
ABCD4-222ENST00000555617 GNASQ5JWF2 1037 aa14.29□□□□□ -0.12
ABCD4-222ENST00000555617 ASTLQ6HA08 431 aaPredicted RBP14.29□□□□□ -0.12
ABCD4-222ENST00000555617 LRSAM1Q6UWE0 723 aa14.29□□□□□ -0.12
ABCD4-222ENST00000555617 LMBR1LQ6UX01 489 aa14.29□□□□□ -0.12
ABCD4-222ENST00000555617 PCSK9Q8NBP7 692 aaKnown RBP14.29□□□□□ -0.12
ABCD4-222ENST00000555617 MSLNLQ96KJ4 702 aa14.29□□□□□ -0.12
ABCD4-222ENST00000555617 C12orf42Q96LP6 360 aa14.29□□□□□ -0.12
ABCD4-222ENST00000555617 ZMIZ1Q9ULJ6 1067 aa14.29□□□□□ -0.12
ABCD4-222ENST00000555617 A0A1B0GUL7 405 aa14.28□□□□□ -0.12
ABCD4-222ENST00000555617 ASTN1O14525 1302 aa14.28□□□□□ -0.12
ABCD4-222ENST00000555617 PI15O43692 258 aa14.28□□□□□ -0.12
ABCD4-222ENST00000555617 SNAI1O95863 264 aaPredicted RBP14.28□□□□□ -0.12
ABCD4-222ENST00000555617 NEFMP07197 916 aa14.28□□□□□ -0.12
ABCD4-222ENST00000555617 GJA9P57773 515 aa14.28□□□□□ -0.12
ABCD4-222ENST00000555617 ITGA7Q13683 1181 aa14.28□□□□□ -0.12
ABCD4-222ENST00000555617 ZNF792Q3KQV3 632 aa14.28□□□□□ -0.12
ABCD4-222ENST00000555617 CWF19L1Q69YN2 538 aaKnown RBP14.28□□□□□ -0.12
ABCD4-222ENST00000555617 VGLL2Q8N8G2 317 aa14.28□□□□□ -0.12
ABCD4-222ENST00000555617 SHCBP1Q8NEM2 672 aa14.28□□□□□ -0.12
ABCD4-222ENST00000555617 RUBCNQ92622 972 aa14.28□□□□□ -0.12
ABCD4-222ENST00000555617 RPGRIP1Q96KN7 1286 aa14.28□□□□□ -0.12
ABCD4-222ENST00000555617 ZBED2Q9BTP6 218 aa14.28□□□□□ -0.12
ABCD4-222ENST00000555617 TRMT13Q9NUP7 481 aaKnown RBP14.28□□□□□ -0.12
ABCD4-222ENST00000555617 IGSF10Q6WRI0 2623 aa14.28□□□□□ -0.12
ABCD4-222ENST00000555617 ELL2O00472 640 aaPredicted RBP14.27□□□□□ -0.13
ABCD4-222ENST00000555617 GJB5O95377 273 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms