RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 FARP2O94887 1054 aaPredicted RBP11.34□□□□□ -0.59
ACTN1-215ENST00000555616 ADORA2AP29274 412 aa11.34□□□□□ -0.59
ACTN1-215ENST00000555616 NT5C2P49902 561 aa11.34□□□□□ -0.59
ACTN1-215ENST00000555616 CACNB2Q08289 660 aaPredicted RBP11.34□□□□□ -0.59
ACTN1-215ENST00000555616 PLS1Q14651 629 aa11.34□□□□□ -0.59
ACTN1-215ENST00000555616 OLFML2BQ68BL8 750 aa11.34□□□□□ -0.59
ACTN1-215ENST00000555616 SLFN13Q68D06 897 aa11.34□□□□□ -0.59
ACTN1-215ENST00000555616 SAMD1Q6SPF0 538 aaPredicted RBP11.34□□□□□ -0.59
ACTN1-215ENST00000555616 NCAPG2Q86XI2 1143 aa11.34□□□□□ -0.59
ACTN1-215ENST00000555616 PRPF38AQ8NAV1 312 aaKnown RBP11.34□□□□□ -0.59
ACTN1-215ENST00000555616 DSCC1Q9BVC3 393 aa11.34□□□□□ -0.59
ACTN1-215ENST00000555616 TEX13BQ9BXU2 312 aa11.34□□□□□ -0.59
ACTN1-215ENST00000555616 LSG1Q9H089 658 aaKnown RBP11.34□□□□□ -0.59
ACTN1-215ENST00000555616 IL25Q9H293 177 aa11.34□□□□□ -0.59
ACTN1-215ENST00000555616 FLRT1Q9NZU1 646 aa11.34□□□□□ -0.59
ACTN1-215ENST00000555616 STX8Q9UNK0 236 aa11.34□□□□□ -0.59
ACTN1-215ENST00000555616 MYH4Q9Y623 1939 aa11.33□□□□□ -0.6
ACTN1-215ENST00000555616 BMP3P12645 472 aa11.33□□□□□ -0.6
ACTN1-215ENST00000555616 STAT3P40763 770 aa11.33□□□□□ -0.6
ACTN1-215ENST00000555616 HAND2P61296 217 aa11.33□□□□□ -0.6
ACTN1-215ENST00000555616 AKNAD1Q5T1N1 836 aa11.33□□□□□ -0.6
ACTN1-215ENST00000555616 MFSD14CQ5VZR4 134 aa11.33□□□□□ -0.6
ACTN1-215ENST00000555616 NPLOC4Q8TAT6 608 aa11.33□□□□□ -0.6
ACTN1-215ENST00000555616 USP26Q9BXU7 913 aa11.33□□□□□ -0.6
ACTN1-215ENST00000555616 C22orf23Q9BZE7 217 aa11.33□□□□□ -0.6
ACTN1-215ENST00000555616 RNF41Q9H4P4 317 aaPredicted RBP11.33□□□□□ -0.6
ACTN1-215ENST00000555616 TCP11L1Q9NUJ3 509 aa11.33□□□□□ -0.6
ACTN1-215ENST00000555616 CTNNA3Q9UI47 895 aa11.33□□□□□ -0.6
ACTN1-215ENST00000555616 FEM1BQ9UK73 627 aa11.33□□□□□ -0.6
ACTN1-215ENST00000555616 U3KPZ7 1027 aaPredicted RBP11.33□□□□□ -0.6
ACTN1-215ENST00000555616 NEDD4P46934 1319 aa11.33□□□□□ -0.6
ACTN1-215ENST00000555616 PLA2G6O60733 806 aa11.32□□□□□ -0.6
ACTN1-215ENST00000555616 COBLO75128 1261 aa11.32□□□□□ -0.6
ACTN1-215ENST00000555616 FCER1AP12319 257 aa11.32□□□□□ -0.6
ACTN1-215ENST00000555616 SLC1A4P43007 532 aa11.32□□□□□ -0.6
ACTN1-215ENST00000555616 STAT2P52630 851 aa11.32□□□□□ -0.6
ACTN1-215ENST00000555616 OAZ1P54368 228 aa11.32□□□□□ -0.6
ACTN1-215ENST00000555616 RNF20Q5VTR2 975 aa11.32□□□□□ -0.6
ACTN1-215ENST00000555616 SNRNP48Q6IEG0 339 aaKnown RBP11.32□□□□□ -0.6
ACTN1-215ENST00000555616 MFSD6Q6ZSS7 791 aa11.32□□□□□ -0.6
ACTN1-215ENST00000555616 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.32□□□□□ -0.6
ACTN1-215ENST00000555616 ANKLE1Q8NAG6 615 aa11.32□□□□□ -0.6
ACTN1-215ENST00000555616 MAP4K1Q92918 833 aa11.32□□□□□ -0.6
ACTN1-215ENST00000555616 KIFC2Q96AC6 838 aa11.32□□□□□ -0.6
ACTN1-215ENST00000555616 SLC38A10Q9HBR0 1119 aa11.32□□□□□ -0.6
ACTN1-215ENST00000555616 TOMM22Q9NS69 142 aa11.32□□□□□ -0.6
ACTN1-215ENST00000555616 SLC5A4Q9NY91 659 aa11.32□□□□□ -0.6
ACTN1-215ENST00000555616 OGDHLQ9ULD0 1010 aa11.32□□□□□ -0.6
ACTN1-215ENST00000555616 COL11A1P12107 1806 aaPredicted RBP11.32□□□□□ -0.6
ACTN1-215ENST00000555616 ZNF213O14771 459 aa11.31□□□□□ -0.6
ACTN1-215ENST00000555616 ZBED4O75132 1171 aa11.31□□□□□ -0.6
ACTN1-215ENST00000555616 TFRCP02786 760 aaKnown RBP11.31□□□□□ -0.6
ACTN1-215ENST00000555616 FDX1P10109 184 aa11.31□□□□□ -0.6
ACTN1-215ENST00000555616 TOP1P11387 765 aaKnown RBP11.31□□□□□ -0.6
ACTN1-215ENST00000555616 CYBAP13498 195 aa11.31□□□□□ -0.6
ACTN1-215ENST00000555616 CCND3P30281 292 aaPredicted RBP11.31□□□□□ -0.6
ACTN1-215ENST00000555616 CYP2C19P33261 490 aa11.31□□□□□ -0.6
ACTN1-215ENST00000555616 PTH1RQ03431 593 aa11.31□□□□□ -0.6
ACTN1-215ENST00000555616 KCTD2Q14681 263 aa11.31□□□□□ -0.6
ACTN1-215ENST00000555616 RRP12Q5JTH9 1297 aaKnown RBP11.31□□□□□ -0.6
ACTN1-215ENST00000555616 RCSD1Q6JBY9 416 aa11.31□□□□□ -0.6
ACTN1-215ENST00000555616 RASGRP2Q7LDG7 609 aa11.31□□□□□ -0.6
ACTN1-215ENST00000555616 DPP9Q86TI2 863 aa11.31□□□□□ -0.6
ACTN1-215ENST00000555616 FAM160B2Q86V87 743 aa11.31□□□□□ -0.6
ACTN1-215ENST00000555616 ESR2Q92731 530 aa11.31□□□□□ -0.6
ACTN1-215ENST00000555616 TBC1D32Q96NH3 1257 aa11.31□□□□□ -0.6
ACTN1-215ENST00000555616 MMP19Q99542 508 aa11.31□□□□□ -0.6
ACTN1-215ENST00000555616 RBM8AQ9Y5S9 174 aaKnown RBP11.31□□□□□ -0.6
ACTN1-215ENST00000555616 TMEM232C9JQI7 657 aa11.3□□□□□ -0.6
ACTN1-215ENST00000555616 RBM25P49756 843 aaKnown RBP11.3□□□□□ -0.6
ACTN1-215ENST00000555616 MNX1P50219 401 aaPredicted RBP11.3□□□□□ -0.6
ACTN1-215ENST00000555616 ANAPC15P60006 121 aa11.3□□□□□ -0.6
ACTN1-215ENST00000555616 IMMTQ16891 758 aaKnown RBP11.3□□□□□ -0.6
ACTN1-215ENST00000555616 ZNF792Q3KQV3 632 aa11.3□□□□□ -0.6
ACTN1-215ENST00000555616 LHX8Q68G74 356 aa11.3□□□□□ -0.6
ACTN1-215ENST00000555616 DIS3LQ8TF46 1054 aaKnown RBP11.3□□□□□ -0.6
ACTN1-215ENST00000555616 CHURC1Q8WUH1 139 aa11.3□□□□□ -0.6
ACTN1-215ENST00000555616 DCAF4Q8WV16 495 aa11.3□□□□□ -0.6
ACTN1-215ENST00000555616 MAML3Q96JK9 1138 aa11.3□□□□□ -0.6
ACTN1-215ENST00000555616 TTC14Q96N46 770 aa11.3□□□□□ -0.6
ACTN1-215ENST00000555616 TMEM47Q9BQJ4 181 aa11.3□□□□□ -0.6
ACTN1-215ENST00000555616 HTATIP2Q9BUP3 242 aa11.3□□□□□ -0.6
ACTN1-215ENST00000555616 DIS3Q9Y2L1 958 aaKnown RBP11.3□□□□□ -0.6
ACTN1-215ENST00000555616 RIPK3Q9Y572 518 aa11.3□□□□□ -0.6
ACTN1-215ENST00000555616 DNAJC25-GNG10A0A024R161 153 aa11.29□□□□□ -0.6
ACTN1-215ENST00000555616 MSCO60682 206 aa11.29□□□□□ -0.6
ACTN1-215ENST00000555616 SNHG28P0DPA3 235 aa11.29□□□□□ -0.6
ACTN1-215ENST00000555616 HSPA4P34932 840 aa11.29□□□□□ -0.6
ACTN1-215ENST00000555616 KCTD1Q719H9 257 aa11.29□□□□□ -0.6
ACTN1-215ENST00000555616 CPXCR1Q8N123 301 aa11.29□□□□□ -0.6
ACTN1-215ENST00000555616 TRPV1Q8NER1 839 aa11.29□□□□□ -0.6
ACTN1-215ENST00000555616 RAVER2Q9HCJ3 691 aaKnown RBP11.29□□□□□ -0.6
ACTN1-215ENST00000555616 FBXO40Q9UH90 709 aa11.29□□□□□ -0.6
ACTN1-215ENST00000555616 DDX20Q9UHI6 824 aaKnown RBP11.29□□□□□ -0.6
ACTN1-215ENST00000555616 NRBP1Q9UHY1 535 aa11.29□□□□□ -0.6
ACTN1-215ENST00000555616 ISY1Q9ULR0 285 aaKnown RBP11.29□□□□□ -0.6
ACTN1-215ENST00000555616 CTDP1Q9Y5B0 961 aaPredicted RBP11.29□□□□□ -0.6
ACTN1-215ENST00000555616 ZNF536O15090 1300 aa11.29□□□□□ -0.6
ACTN1-215ENST00000555616 FRMPD3Q5JV73 1810 aa11.28□□□□□ -0.6
ACTN1-215ENST00000555616 CEP290O15078 2479 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms