RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 KCNJ14Q9UNX9 436 aa11.15□□□□□ -0.62
HNRNPC-220ENST00000555585 MYH15Q9Y2K3 1946 aa11.15□□□□□ -0.62
HNRNPC-220ENST00000555585 TMEM232C9JQI7 657 aa11.14□□□□□ -0.63
HNRNPC-220ENST00000555585 CYTH3O43739 400 aa11.14□□□□□ -0.63
HNRNPC-220ENST00000555585 SLC16A2P36021 539 aa11.14□□□□□ -0.63
HNRNPC-220ENST00000555585 IREB2P48200 963 aaKnown RBP11.14□□□□□ -0.63
HNRNPC-220ENST00000555585 MAP3K9P80192 1104 aa11.14□□□□□ -0.63
HNRNPC-220ENST00000555585 SLC35G1Q2M3R5 365 aa11.14□□□□□ -0.63
HNRNPC-220ENST00000555585 CLEC17AQ6ZS10 378 aa11.14□□□□□ -0.63
HNRNPC-220ENST00000555585 ADGRF4Q8IZF3 695 aa11.14□□□□□ -0.63
HNRNPC-220ENST00000555585 SPICE1Q8N0Z3 855 aa11.14□□□□□ -0.63
HNRNPC-220ENST00000555585 ZNF526Q8TF50 670 aaPredicted RBP11.14□□□□□ -0.63
HNRNPC-220ENST00000555585 GPKOWQ92917 476 aaPredicted RBP eCLIP11.14□□□□□ -0.63
HNRNPC-220ENST00000555585 CHAMP1Q96JM3 812 aa11.14□□□□□ -0.63
HNRNPC-220ENST00000555585 PIGSQ96S52 555 aa11.14□□□□□ -0.63
HNRNPC-220ENST00000555585 RIOX1Q9H6W3 641 aa11.14□□□□□ -0.63
HNRNPC-220ENST00000555585 VCPKMTQ9H867 229 aa11.14□□□□□ -0.63
HNRNPC-220ENST00000555585 BAZ2BQ9UIF8 2168 aaKnown RBP11.14□□□□□ -0.63
HNRNPC-220ENST00000555585 DDX11L8A8MPP1 907 aa11.13□□□□□ -0.63
HNRNPC-220ENST00000555585 MMP1P03956 469 aa11.13□□□□□ -0.63
HNRNPC-220ENST00000555585 POTEJP0CG39 1038 aa11.13□□□□□ -0.63
HNRNPC-220ENST00000555585 PTPRAP18433 802 aa11.13□□□□□ -0.63
HNRNPC-220ENST00000555585 NLRP5P59047 1200 aa11.13□□□□□ -0.63
HNRNPC-220ENST00000555585 KIF23Q02241 960 aaPredicted RBP11.13□□□□□ -0.63
HNRNPC-220ENST00000555585 DNM1Q05193 864 aaKnown RBP11.13□□□□□ -0.63
HNRNPC-220ENST00000555585 NOL9Q5SY16 702 aaKnown RBP11.13□□□□□ -0.63
HNRNPC-220ENST00000555585 FAM83BQ5T0W9 1011 aa11.13□□□□□ -0.63
HNRNPC-220ENST00000555585 FAM173BQ6P4H8 233 aa11.13□□□□□ -0.63
HNRNPC-220ENST00000555585 HEATR3Q7Z4Q2 680 aa11.13□□□□□ -0.63
HNRNPC-220ENST00000555585 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.13□□□□□ -0.636e-36■□□□□ 10
HNRNPC-220ENST00000555585 BRMS1Q9HCU9 246 aa11.13□□□□□ -0.63
HNRNPC-220ENST00000555585 CNPY2Q9Y2B0 182 aa11.13□□□□□ -0.63
HNRNPC-220ENST00000555585 CSADQ9Y600 493 aa11.13□□□□□ -0.63
HNRNPC-220ENST00000555585 TCHHQ07283 1943 aa11.13□□□□□ -0.63
HNRNPC-220ENST00000555585 KIF28PB7ZC32 967 aa11.12□□□□□ -0.63
HNRNPC-220ENST00000555585 USP17L10C9JJH3 530 aa11.12□□□□□ -0.63
HNRNPC-220ENST00000555585 PTMSP20962 102 aa11.12□□□□□ -0.63
HNRNPC-220ENST00000555585 KRT2P35908 639 aa11.12□□□□□ -0.63
HNRNPC-220ENST00000555585 USP14P54578 494 aa11.12□□□□□ -0.63
HNRNPC-220ENST00000555585 NAPAP54920 295 aa11.12□□□□□ -0.63
HNRNPC-220ENST00000555585 SPP2Q13103 211 aa11.12□□□□□ -0.63
HNRNPC-220ENST00000555585 KIAA1755Q5JYT7 1200 aa11.12□□□□□ -0.63
HNRNPC-220ENST00000555585 SYDE2Q5VT97 1194 aa11.12□□□□□ -0.63
HNRNPC-220ENST00000555585 MAP1SQ66K74 1059 aaPredicted RBP11.12□□□□□ -0.63
HNRNPC-220ENST00000555585 WWC2Q6AWC2 1192 aa11.12□□□□□ -0.63
HNRNPC-220ENST00000555585 ARMC9Q7Z3E5 817 aa11.12□□□□□ -0.63
HNRNPC-220ENST00000555585 BRAPQ7Z569 592 aa11.12□□□□□ -0.63
HNRNPC-220ENST00000555585 DIS3L2Q8IYB7 885 aaKnown RBP11.12□□□□□ -0.63
HNRNPC-220ENST00000555585 CCDC148Q8NFR7 591 aa11.12□□□□□ -0.63
HNRNPC-220ENST00000555585 KIF12Q96FN5 646 aa11.12□□□□□ -0.63
HNRNPC-220ENST00000555585 ZNF396Q96N95 335 aaPredicted RBP11.12□□□□□ -0.63
HNRNPC-220ENST00000555585 WDR18Q9BV38 432 aa11.12□□□□□ -0.63
HNRNPC-220ENST00000555585 PHF20Q9BVI0 1012 aa11.12□□□□□ -0.63
HNRNPC-220ENST00000555585 KIAA1683Q9H0B3 1180 aa11.12□□□□□ -0.63
HNRNPC-220ENST00000555585 JMJD4Q9H9V9 463 aa11.12□□□□□ -0.63
HNRNPC-220ENST00000555585 SH3GLB2Q9NR46 395 aa11.12□□□□□ -0.63
HNRNPC-220ENST00000555585 ZHX2Q9Y6X8 837 aa11.12□□□□□ -0.63
HNRNPC-220ENST00000555585 OTOFQ9HC10 1997 aa11.12□□□□□ -0.63
HNRNPC-220ENST00000555585 PNMA6FA0A0J9YX94 578 aa11.11□□□□□ -0.63
HNRNPC-220ENST00000555585 TRIM75PA6NK02 468 aa11.11□□□□□ -0.63
HNRNPC-220ENST00000555585 BTBD18B2RXH4 712 aa11.11□□□□□ -0.63
HNRNPC-220ENST00000555585 STXBP3O00186 592 aa11.11□□□□□ -0.63
HNRNPC-220ENST00000555585 CALML3P27482 149 aa11.11□□□□□ -0.63
HNRNPC-220ENST00000555585 STAT2P52630 851 aa11.11□□□□□ -0.63
HNRNPC-220ENST00000555585 KRT85P78386 507 aa11.11□□□□□ -0.63
HNRNPC-220ENST00000555585 MTMR2Q13614 643 aa11.11□□□□□ -0.63
HNRNPC-220ENST00000555585 VGLL4Q14135 290 aa11.11□□□□□ -0.63
HNRNPC-220ENST00000555585 CSPP1Q1MSJ5 1256 aa11.11□□□□□ -0.63
HNRNPC-220ENST00000555585 ASTLQ6HA08 431 aaPredicted RBP11.11□□□□□ -0.63
HNRNPC-220ENST00000555585 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.11□□□□□ -0.63
HNRNPC-220ENST00000555585 LDHDQ86WU2 507 aa11.11□□□□□ -0.63
HNRNPC-220ENST00000555585 ZNF280CQ8ND82 737 aa11.11□□□□□ -0.63
HNRNPC-220ENST00000555585 CCDC12Q8WUD4 166 aaPredicted RBP11.11□□□□□ -0.63
HNRNPC-220ENST00000555585 CHURC1Q8WUH1 139 aa11.11□□□□□ -0.63
HNRNPC-220ENST00000555585 SHISA4Q96DD7 197 aa11.11□□□□□ -0.63
HNRNPC-220ENST00000555585 ZNF408Q9H9D4 720 aa11.11□□□□□ -0.63
HNRNPC-220ENST00000555585 GDPD2Q9HCC8 539 aa11.11□□□□□ -0.63
HNRNPC-220ENST00000555585 NMRK2Q9NPI5 230 aa11.11□□□□□ -0.63
HNRNPC-220ENST00000555585 BARHL2Q9NY43 387 aa11.11□□□□□ -0.63
HNRNPC-220ENST00000555585 TFIP11Q9UBB9 837 aaKnown RBP11.11□□□□□ -0.63
HNRNPC-220ENST00000555585 FEM1BQ9UK73 627 aa11.11□□□□□ -0.63
HNRNPC-220ENST00000555585 PHIPQ8WWQ0 1821 aa11.11□□□□□ -0.63
HNRNPC-220ENST00000555585 hCG_1984214I3L0E3 225 aa11.1□□□□□ -0.63
HNRNPC-220ENST00000555585 TRAF5O00463 557 aa11.1□□□□□ -0.63
HNRNPC-220ENST00000555585 ZBTB5O15062 677 aa11.1□□□□□ -0.63
HNRNPC-220ENST00000555585 WDR46O15213 610 aaKnown RBP11.1□□□□□ -0.63
HNRNPC-220ENST00000555585 FIBPO43427 364 aa11.1□□□□□ -0.63
HNRNPC-220ENST00000555585 PRPF40AO75400 957 aaKnown RBP11.1□□□□□ -0.63
HNRNPC-220ENST00000555585 U2AF2P26368 475 aaKnown RBP eCLIP11.1□□□□□ -0.63
HNRNPC-220ENST00000555585 SNAP25P60880 206 aa11.1□□□□□ -0.63
HNRNPC-220ENST00000555585 DGKZQ13574 1117 aa11.1□□□□□ -0.63
HNRNPC-220ENST00000555585 CDC37Q16543 378 aaPredicted RBP11.1□□□□□ -0.63
HNRNPC-220ENST00000555585 BTNL9Q6UXG8 535 aa11.1□□□□□ -0.63
HNRNPC-220ENST00000555585 MOB2Q70IA6 237 aa11.1□□□□□ -0.63
HNRNPC-220ENST00000555585 FAM160B2Q86V87 743 aa11.1□□□□□ -0.63
HNRNPC-220ENST00000555585 ANKRD13AQ8IZ07 590 aa11.1□□□□□ -0.63
HNRNPC-220ENST00000555585 ZNF713Q8N859 430 aaPredicted RBP11.1□□□□□ -0.63
HNRNPC-220ENST00000555585 OXER1Q8TDS5 423 aa11.1□□□□□ -0.63
HNRNPC-220ENST00000555585 LPAR1Q92633 364 aa11.1□□□□□ -0.63
HNRNPC-220ENST00000555585 KIFC2Q96AC6 838 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms