RNA–Protein interactions for RNA: ENST00000555576.5

TUBB3-208, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-208ENST00000555576 TEX13BQ9BXU2 312 aa15.9■□□□□ 0.14
TUBB3-208ENST00000555576 ECHDC1Q9NTX5 307 aa15.9■□□□□ 0.14
TUBB3-208ENST00000555576 NYAP2Q9P242 653 aa15.9■□□□□ 0.14
TUBB3-208ENST00000555576 RIPK3Q9Y572 518 aa15.9■□□□□ 0.14
TUBB3-208ENST00000555576 SYNGAP1Q96PV0 1343 aa15.9■□□□□ 0.14
TUBB3-208ENST00000555576 F5H6K3 240 aa15.89■□□□□ 0.13
TUBB3-208ENST00000555576 ATP2A1O14983 1001 aa15.89■□□□□ 0.13
TUBB3-208ENST00000555576 EPHB4P54760 987 aa15.89■□□□□ 0.13
TUBB3-208ENST00000555576 KLRC3Q07444 240 aa15.89■□□□□ 0.13
TUBB3-208ENST00000555576 ZNF697Q5TEC3 545 aa15.89■□□□□ 0.13
TUBB3-208ENST00000555576 TSHZ3Q63HK5 1081 aa15.89■□□□□ 0.13
TUBB3-208ENST00000555576 CCSAPQ6IQ19 270 aaPredicted RBP15.89■□□□□ 0.13
TUBB3-208ENST00000555576 MAMDC4Q6UXC1 1216 aa15.89■□□□□ 0.13
TUBB3-208ENST00000555576 RNF180Q86T96 592 aa15.89■□□□□ 0.13
TUBB3-208ENST00000555576 MSL3Q8N5Y2 521 aaKnown RBP15.89■□□□□ 0.13
TUBB3-208ENST00000555576 APPBP2Q92624 585 aa15.89■□□□□ 0.13
TUBB3-208ENST00000555576 FGD4Q96M96 766 aa15.89■□□□□ 0.13
TUBB3-208ENST00000555576 SYNRGQ9UMZ2 1314 aa15.89■□□□□ 0.13
TUBB3-208ENST00000555576 PLIN4Q96Q06 1357 aa15.88■□□□□ 0.13
TUBB3-208ENST00000555576 CHD9Q3L8U1 2897 aa15.88■□□□□ 0.13
TUBB3-208ENST00000555576 KIAA0355O15063 1070 aa15.88■□□□□ 0.13
TUBB3-208ENST00000555576 SNAI1O95863 264 aaPredicted RBP15.88■□□□□ 0.13
TUBB3-208ENST00000555576 CLTBP09497 229 aa15.88■□□□□ 0.13
TUBB3-208ENST00000555576 SMAD3P84022 425 aaKnown RBP15.88■□□□□ 0.13
TUBB3-208ENST00000555576 SNRNP48Q6IEG0 339 aaKnown RBP15.88■□□□□ 0.13
TUBB3-208ENST00000555576 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.88■□□□□ 0.13
TUBB3-208ENST00000555576 KLHDC9Q8NEP7 349 aa15.88■□□□□ 0.13
TUBB3-208ENST00000555576 CDX2Q99626 313 aaPredicted RBP15.88■□□□□ 0.13
TUBB3-208ENST00000555576 TTYH1Q9H313 450 aaPredicted RBP15.88■□□□□ 0.13
TUBB3-208ENST00000555576 M0R2C6 588 aa15.87■□□□□ 0.13
TUBB3-208ENST00000555576 GPAA1O43292 621 aa15.87■□□□□ 0.13
TUBB3-208ENST00000555576 ADCY6O43306 1168 aa15.87■□□□□ 0.13
TUBB3-208ENST00000555576 RAD21O60216 631 aa15.87■□□□□ 0.13
TUBB3-208ENST00000555576 ANKRD33Q7Z3H0 272 aa15.87■□□□□ 0.13
TUBB3-208ENST00000555576 ZNF467Q7Z7K2 595 aaPredicted RBP15.87■□□□□ 0.13
TUBB3-208ENST00000555576 STK11IPQ8N1F8 1099 aa15.87■□□□□ 0.13
TUBB3-208ENST00000555576 MKL1Q969V6 931 aa15.87■□□□□ 0.13
TUBB3-208ENST00000555576 CEP95Q96GE4 821 aa15.87■□□□□ 0.13
TUBB3-208ENST00000555576 TSEN34Q9BSV6 310 aaKnown RBP15.87■□□□□ 0.13
TUBB3-208ENST00000555576 COL25A1Q9BXS0 654 aaPredicted RBP15.87■□□□□ 0.13
TUBB3-208ENST00000555576 DCTPP1Q9H773 170 aa15.87■□□□□ 0.13
TUBB3-208ENST00000555576 SLC38A10Q9HBR0 1119 aa15.87■□□□□ 0.13
TUBB3-208ENST00000555576 SYNPO2Q9UMS6 1093 aa15.87■□□□□ 0.13
TUBB3-208ENST00000555576 TACC3Q9Y6A5 838 aa15.87■□□□□ 0.13
TUBB3-208ENST00000555576 MCM3APO60318 1980 aa15.87■□□□□ 0.13
TUBB3-208ENST00000555576 LRRC37A2A6NM11 1700 aa15.86■□□□□ 0.13
TUBB3-208ENST00000555576 MYADML2A6NDP7 307 aa15.86■□□□□ 0.13
TUBB3-208ENST00000555576 MINDY4BA8MYZ0 360 aa15.86■□□□□ 0.13
TUBB3-208ENST00000555576 RNF113AO15541 343 aaKnown RBP15.86■□□□□ 0.13
TUBB3-208ENST00000555576 CST5P28325 142 aaPredicted RBP15.86■□□□□ 0.13
TUBB3-208ENST00000555576 ACLYP53396 1101 aa15.86■□□□□ 0.13
TUBB3-208ENST00000555576 FAAP100Q0VG06 881 aa15.86■□□□□ 0.13
TUBB3-208ENST00000555576 PRPF38AQ8NAV1 312 aaKnown RBP15.86■□□□□ 0.13
TUBB3-208ENST00000555576 GMCL1P1Q8NEA9 526 aa15.86■□□□□ 0.13
TUBB3-208ENST00000555576 SEMA6BQ9H3T3 888 aa15.86■□□□□ 0.13
TUBB3-208ENST00000555576 MKNK2Q9HBH9 465 aa15.86■□□□□ 0.13
TUBB3-208ENST00000555576 MTMR4Q9NYA4 1195 aa15.86■□□□□ 0.13
TUBB3-208ENST00000555576 CNPY2Q9Y2B0 182 aa15.86■□□□□ 0.13
TUBB3-208ENST00000555576 PQBP1O60828 265 aaKnown RBP15.85■□□□□ 0.13
TUBB3-208ENST00000555576 PRDM1O75626 825 aa15.85■□□□□ 0.13
TUBB3-208ENST00000555576 IRX5P78411 483 aaPredicted RBP15.85■□□□□ 0.13
TUBB3-208ENST00000555576 TOX2Q96NM4 488 aa15.85■□□□□ 0.13
TUBB3-208ENST00000555576 KATNBL1Q9H079 304 aa15.85■□□□□ 0.13
TUBB3-208ENST00000555576 CLIP2Q9UDT6 1046 aa15.85■□□□□ 0.13
TUBB3-208ENST00000555576 MOXD2PA6NHM9 499 aa15.84■□□□□ 0.13
TUBB3-208ENST00000555576 DUSP11O75319 330 aaKnown RBP15.84■□□□□ 0.13
TUBB3-208ENST00000555576 ZFYP08048 801 aaPredicted RBP15.84■□□□□ 0.13
TUBB3-208ENST00000555576 GNAT2P19087 354 aa15.84■□□□□ 0.13
TUBB3-208ENST00000555576 LRRC47Q8N1G4 583 aaKnown RBP15.84■□□□□ 0.13
TUBB3-208ENST00000555576 RAVER2Q9HCJ3 691 aaKnown RBP15.84■□□□□ 0.13
TUBB3-208ENST00000555576 STARD7Q9NQZ5 370 aa15.84■□□□□ 0.13
TUBB3-208ENST00000555576 TBX21Q9UL17 535 aa15.84■□□□□ 0.13
TUBB3-208ENST00000555576 FAM184BQ9ULE4 1060 aa15.84■□□□□ 0.13
TUBB3-208ENST00000555576 CHD7Q9P2D1 2997 aa15.84■□□□□ 0.13
TUBB3-208ENST00000555576 CTAGE5O15320 804 aa15.83■□□□□ 0.12
TUBB3-208ENST00000555576 FOXP2O15409 715 aa15.83■□□□□ 0.12
TUBB3-208ENST00000555576 TDO2P48775 406 aa15.83■□□□□ 0.12
TUBB3-208ENST00000555576 OAZ1P54368 228 aa15.83■□□□□ 0.12
TUBB3-208ENST00000555576 ACVR2BQ13705 512 aa15.83■□□□□ 0.12
TUBB3-208ENST00000555576 KCNA10Q16322 511 aa15.83■□□□□ 0.12
TUBB3-208ENST00000555576 IFNL3Q8IZI9 196 aa15.83■□□□□ 0.12
TUBB3-208ENST00000555576 CPXCR1Q8N123 301 aa15.83■□□□□ 0.12
TUBB3-208ENST00000555576 PI4K2BQ8TCG2 481 aa15.83■□□□□ 0.12
TUBB3-208ENST00000555576 KIFC2Q96AC6 838 aa15.83■□□□□ 0.12
TUBB3-208ENST00000555576 DDX11Q96FC9 970 aa15.83■□□□□ 0.12
TUBB3-208ENST00000555576 GPATCH3Q96I76 525 aa15.83■□□□□ 0.12
TUBB3-208ENST00000555576 RNPC3Q96LT9 517 aaKnown RBP15.83■□□□□ 0.12
TUBB3-208ENST00000555576 UPF3AQ9H1J1 476 aaKnown RBP15.83■□□□□ 0.12
TUBB3-208ENST00000555576 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.83■□□□□ 0.12
TUBB3-208ENST00000555576 FEM1BQ9UK73 627 aa15.83■□□□□ 0.12
TUBB3-208ENST00000555576 ZHX1Q9UKY1 873 aaPredicted RBP15.83■□□□□ 0.12
TUBB3-208ENST00000555576 TTC28Q96AY4 2481 aa15.82■□□□□ 0.12
TUBB3-208ENST00000555576 TMEM265A0A087WTH1 108 aa15.82■□□□□ 0.12
TUBB3-208ENST00000555576 PATL2C9JE40 543 aaKnown RBP15.82■□□□□ 0.12
TUBB3-208ENST00000555576 ZBED4O75132 1171 aa15.82■□□□□ 0.12
TUBB3-208ENST00000555576 TTLL1O95922 423 aa15.82■□□□□ 0.12
TUBB3-208ENST00000555576 RAG1P15918 1043 aa15.82■□□□□ 0.12
TUBB3-208ENST00000555576 CDK7P50613 346 aa15.82■□□□□ 0.12
TUBB3-208ENST00000555576 NKX3-2P78367 333 aa15.82■□□□□ 0.12
TUBB3-208ENST00000555576 FPGSQ05932 587 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms