RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 RUFY2Q8WXA3 655 aa24.2■■□□□ 1.46
VTI1B-205ENST00000555543 TMEM47Q9BQJ4 181 aa24.2■■□□□ 1.46
VTI1B-205ENST00000555543 ISY1Q9ULR0 285 aaKnown RBP24.2■■□□□ 1.46
VTI1B-205ENST00000555543 MTMR7Q9Y216 660 aa24.2■■□□□ 1.46
VTI1B-205ENST00000555543 SGSM2O43147 1006 aa24.19■■□□□ 1.46
VTI1B-205ENST00000555543 COBLO75128 1261 aa24.19■■□□□ 1.46
VTI1B-205ENST00000555543 SNRNP48Q6IEG0 339 aaKnown RBP24.19■■□□□ 1.46
VTI1B-205ENST00000555543 KCTD1Q719H9 257 aa24.19■■□□□ 1.46
VTI1B-205ENST00000555543 ESR2Q92731 530 aa24.19■■□□□ 1.46
VTI1B-205ENST00000555543 TEX13BQ9BXU2 312 aa24.19■■□□□ 1.46
VTI1B-205ENST00000555543 SLC38A10Q9HBR0 1119 aa24.19■■□□□ 1.46
VTI1B-205ENST00000555543 HMX1Q9NP08 348 aaPredicted RBP24.19■■□□□ 1.46
VTI1B-205ENST00000555543 CTNNA3Q9UI47 895 aa24.19■■□□□ 1.46
VTI1B-205ENST00000555543 IGHA2P01877 340 aa24.18■■□□□ 1.46
VTI1B-205ENST00000555543 TOP1P11387 765 aaKnown RBP24.18■■□□□ 1.46
VTI1B-205ENST00000555543 STAT2P52630 851 aa24.18■■□□□ 1.46
VTI1B-205ENST00000555543 UBE2Q1Q7Z7E8 422 aa24.18■■□□□ 1.46
VTI1B-205ENST00000555543 DPP9Q86TI2 863 aa24.18■■□□□ 1.46
VTI1B-205ENST00000555543 ABRAQ8N0Z2 381 aa24.18■■□□□ 1.46
VTI1B-205ENST00000555543 ZKSCAN3Q9BRR0 538 aa24.18■■□□□ 1.46
VTI1B-205ENST00000555543 RIPK3Q9Y572 518 aa24.18■■□□□ 1.46
VTI1B-205ENST00000555543 B4E1Z4 1266 aa24.17■■□□□ 1.46
VTI1B-205ENST00000555543 ATP2A1O14983 1001 aa24.17■■□□□ 1.46
VTI1B-205ENST00000555543 ZBED4O75132 1171 aa24.17■■□□□ 1.46
VTI1B-205ENST00000555543 KDM4AO75164 1064 aa24.17■■□□□ 1.46
VTI1B-205ENST00000555543 FCER1AP12319 257 aa24.17■■□□□ 1.46
VTI1B-205ENST00000555543 CPXCR1Q8N123 301 aa24.17■■□□□ 1.46
VTI1B-205ENST00000555543 CRISPLD2Q9H0B8 497 aa24.17■■□□□ 1.46
VTI1B-205ENST00000555543 RAVER2Q9HCJ3 691 aaKnown RBP24.17■■□□□ 1.46
VTI1B-205ENST00000555543 CCND3P30281 292 aaPredicted RBP24.16■■□□□ 1.46
VTI1B-205ENST00000555543 IKQ13123 557 aaPredicted RBP24.16■■□□□ 1.46
VTI1B-205ENST00000555543 FAM160B2Q86V87 743 aa24.16■■□□□ 1.46
VTI1B-205ENST00000555543 DCAF4Q8WV16 495 aa24.16■■□□□ 1.46
VTI1B-205ENST00000555543 MMP19Q99542 508 aa24.16■■□□□ 1.46
VTI1B-205ENST00000555543 PGK2P07205 417 aa24.15■■□□□ 1.46
VTI1B-205ENST00000555543 CYP2C19P33261 490 aa24.15■■□□□ 1.46
VTI1B-205ENST00000555543 COPB2P35606 906 aa24.15■■□□□ 1.46
VTI1B-205ENST00000555543 CCDC96Q2M329 555 aa24.15■■□□□ 1.46
VTI1B-205ENST00000555543 CHURC1Q8WUH1 139 aa24.15■■□□□ 1.46
VTI1B-205ENST00000555543 CCDC136Q96JN2 1154 aa24.15■■□□□ 1.46
VTI1B-205ENST00000555543 ZNFX1Q9P2E3 1918 aaKnown RBP24.14■■□□□ 1.46
VTI1B-205ENST00000555543 PLA2G6O60733 806 aa24.14■■□□□ 1.45
VTI1B-205ENST00000555543 FARP2O94887 1054 aaPredicted RBP24.14■■□□□ 1.45
VTI1B-205ENST00000555543 TFRCP02786 760 aaKnown RBP24.14■■□□□ 1.45
VTI1B-205ENST00000555543 SLC4A3P48751 1232 aa24.14■■□□□ 1.45
VTI1B-205ENST00000555543 MFSD14CQ5VZR4 134 aa24.14■■□□□ 1.45
VTI1B-205ENST00000555543 TTC14Q96N46 770 aa24.14■■□□□ 1.45
VTI1B-205ENST00000555543 CTDP1Q9Y5B0 961 aaPredicted RBP24.14■■□□□ 1.45
VTI1B-205ENST00000555543 TAF6LQ9Y6J9 622 aa24.14■■□□□ 1.45
VTI1B-205ENST00000555543 ZNF536O15090 1300 aa24.13■■□□□ 1.45
VTI1B-205ENST00000555543 CYP21A2P08686 494 aa24.13■■□□□ 1.45
VTI1B-205ENST00000555543 OAZ1P54368 228 aa24.13■■□□□ 1.45
VTI1B-205ENST00000555543 SNAP25P60880 206 aa24.13■■□□□ 1.45
VTI1B-205ENST00000555543 KCTD2Q14681 263 aa24.13■■□□□ 1.45
VTI1B-205ENST00000555543 BMP2KLQ5H9B9 411 aa24.13■■□□□ 1.45
VTI1B-205ENST00000555543 OLFML2BQ68BL8 750 aa24.13■■□□□ 1.45
VTI1B-205ENST00000555543 TTBK2Q6IQ55 1244 aa24.13■■□□□ 1.45
VTI1B-205ENST00000555543 TRPV1Q8NER1 839 aa24.13■■□□□ 1.45
VTI1B-205ENST00000555543 ZSWIM5Q9P217 1185 aa24.13■■□□□ 1.45
VTI1B-205ENST00000555543 PRR12Q9ULL5 1215 aa24.13■■□□□ 1.45
VTI1B-205ENST00000555543 FRMPD2Q68DX3 1309 aaPredicted RBP24.12■■□□□ 1.45
VTI1B-205ENST00000555543 PDHBP11177 359 aa24.12■■□□□ 1.45
VTI1B-205ENST00000555543 NT5C2P49902 561 aa24.12■■□□□ 1.45
VTI1B-205ENST00000555543 MAML3Q96JK9 1138 aa24.12■■□□□ 1.45
VTI1B-205ENST00000555543 U3KPZ7 1027 aaPredicted RBP24.12■■□□□ 1.45
VTI1B-205ENST00000555543 PLXNA1Q9UIW2 1896 aa24.11■■□□□ 1.45
VTI1B-205ENST00000555543 SNHG28P0DPA3 235 aa24.11■■□□□ 1.45
VTI1B-205ENST00000555543 FDX1P10109 184 aa24.11■■□□□ 1.45
VTI1B-205ENST00000555543 CYBAP13498 195 aa24.11■■□□□ 1.45
VTI1B-205ENST00000555543 SLC16A2P36021 539 aa24.11■■□□□ 1.45
VTI1B-205ENST00000555543 IQCA1Q86XH1 822 aa24.11■■□□□ 1.45
VTI1B-205ENST00000555543 DGKHQ86XP1 1220 aa24.11■■□□□ 1.45
VTI1B-205ENST00000555543 ENAHQ8N8S7 591 aaPredicted RBP24.11■■□□□ 1.45
VTI1B-205ENST00000555543 DIS3LQ8TF46 1054 aaKnown RBP24.11■■□□□ 1.45
VTI1B-205ENST00000555543 AGBL1Q96MI9 1066 aa24.11■■□□□ 1.45
VTI1B-205ENST00000555543 ZSCAN10Q96SZ4 725 aaPredicted RBP24.11■■□□□ 1.45
VTI1B-205ENST00000555543 KRT23Q9C075 422 aa24.11■■□□□ 1.45
VTI1B-205ENST00000555543 CNNM2Q9H8M5 875 aa24.11■■□□□ 1.45
VTI1B-205ENST00000555543 GPCPD1Q9NPB8 672 aa24.11■■□□□ 1.45
VTI1B-205ENST00000555543 SLC5A4Q9NY91 659 aa24.11■■□□□ 1.45
VTI1B-205ENST00000555543 TNKSO95271 1327 aa24.1■■□□□ 1.45
VTI1B-205ENST00000555543 FRMPD3Q5JV73 1810 aa24.1■■□□□ 1.45
VTI1B-205ENST00000555543 MNX1P50219 401 aaPredicted RBP24.1■■□□□ 1.45
VTI1B-205ENST00000555543 ZNF792Q3KQV3 632 aa24.1■■□□□ 1.45
VTI1B-205ENST00000555543 LHX8Q68G74 356 aa24.1■■□□□ 1.45
VTI1B-205ENST00000555543 BTNL9Q6UXG8 535 aa24.1■■□□□ 1.45
VTI1B-205ENST00000555543 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.1■■□□□ 1.45
VTI1B-205ENST00000555543 MAP4K1Q92918 833 aa24.1■■□□□ 1.45
VTI1B-205ENST00000555543 ESYT1Q9BSJ8 1104 aa24.1■■□□□ 1.45
VTI1B-205ENST00000555543 HOMER2Q9NSB8 354 aa24.1■■□□□ 1.45
VTI1B-205ENST00000555543 OGDHLQ9ULD0 1010 aa24.1■■□□□ 1.45
VTI1B-205ENST00000555543 TAL1P17542 331 aaPredicted RBP24.09■■□□□ 1.45
VTI1B-205ENST00000555543 ZNF543Q08ER8 600 aa24.09■■□□□ 1.45
VTI1B-205ENST00000555543 CCDC174Q6PII3 467 aa24.09■■□□□ 1.45
VTI1B-205ENST00000555543 CYB5R4Q7L1T6 521 aa24.09■■□□□ 1.45
VTI1B-205ENST00000555543 ANKS1AQ92625 1134 aa24.09■■□□□ 1.45
VTI1B-205ENST00000555543 NEFLP07196 543 aa24.08■■□□□ 1.45
VTI1B-205ENST00000555543 CCDC178Q5BJE1 867 aa24.08■■□□□ 1.45
VTI1B-205ENST00000555543 SYDE2Q5VT97 1194 aa24.08■■□□□ 1.45
VTI1B-205ENST00000555543 PRPF38BQ5VTL8 546 aaKnown RBP24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms