RNA–Protein interactions for RNA: ENST00000555537.1

NEK9-206, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-206ENST00000555537 COL11A1P12107 1806 aaPredicted RBP10.14□□□□□ -0.79
NEK9-206ENST00000555537 UMODL1Q5DID0 1318 aa10.14□□□□□ -0.79
NEK9-206ENST00000555537 MOXD2PA6NHM9 499 aa10.14□□□□□ -0.79
NEK9-206ENST00000555537 ARVCFO00192 962 aa10.14□□□□□ -0.79
NEK9-206ENST00000555537 RFXAPO00287 272 aa10.14□□□□□ -0.79
NEK9-206ENST00000555537 VWA5AO00534 786 aa10.14□□□□□ -0.79
NEK9-206ENST00000555537 WDR46O15213 610 aaKnown RBP10.14□□□□□ -0.79
NEK9-206ENST00000555537 C6orf222P0C671 652 aaPredicted RBP10.14□□□□□ -0.79
NEK9-206ENST00000555537 PDE6AP16499 860 aa10.14□□□□□ -0.79
NEK9-206ENST00000555537 HOXD11P31277 338 aaPredicted RBP10.14□□□□□ -0.79
NEK9-206ENST00000555537 KCNQ1P51787 676 aa10.14□□□□□ -0.79
NEK9-206ENST00000555537 FAM83BQ5T0W9 1011 aa10.14□□□□□ -0.79
NEK9-206ENST00000555537 OTOP2Q7RTS6 562 aa10.14□□□□□ -0.79
NEK9-206ENST00000555537 LCORLQ8N3X6 602 aa10.14□□□□□ -0.79
NEK9-206ENST00000555537 REPS2Q8NFH8 660 aa10.14□□□□□ -0.79
NEK9-206ENST00000555537 BCL11AQ9H165 835 aa10.14□□□□□ -0.79
NEK9-206ENST00000555537 EPHX3Q9H6B9 360 aa10.14□□□□□ -0.79
NEK9-206ENST00000555537 ARMT1Q9H993 441 aa10.14□□□□□ -0.79
NEK9-206ENST00000555537 SLC28A3Q9HAS3 691 aa10.14□□□□□ -0.79
NEK9-206ENST00000555537 ZNF214Q9UL59 606 aaPredicted RBP10.14□□□□□ -0.79
NEK9-206ENST00000555537 XIRP2A4UGR9 3374 aa10.14□□□□□ -0.79
NEK9-206ENST00000555537 ELP1O95163 1332 aa10.13□□□□□ -0.79
NEK9-206ENST00000555537 ZNF532Q9HCE3 1301 aa10.13□□□□□ -0.79
NEK9-206ENST00000555537 IPO8O15397 1037 aaKnown RBP10.13□□□□□ -0.79
NEK9-206ENST00000555537 DUSP11O75319 330 aaKnown RBP10.13□□□□□ -0.79
NEK9-206ENST00000555537 FGBP02675 491 aa10.13□□□□□ -0.79
NEK9-206ENST00000555537 CDK8P49336 464 aa10.13□□□□□ -0.79
NEK9-206ENST00000555537 CCL23P55773 120 aa10.13□□□□□ -0.79
NEK9-206ENST00000555537 BEX3Q00994 111 aa10.13□□□□□ -0.79
NEK9-206ENST00000555537 ACVR2BQ13705 512 aa10.13□□□□□ -0.79
NEK9-206ENST00000555537 SKIV2LQ15477 1246 aaKnown RBP10.13□□□□□ -0.79
NEK9-206ENST00000555537 RAB30Q15771 203 aa10.13□□□□□ -0.79
NEK9-206ENST00000555537 GNASQ5JWF2 1037 aa10.13□□□□□ -0.79
NEK9-206ENST00000555537 CCDC174Q6PII3 467 aa10.13□□□□□ -0.79
NEK9-206ENST00000555537 AACSQ86V21 672 aa10.13□□□□□ -0.79
NEK9-206ENST00000555537 FAM126BQ8IXS8 530 aa10.13□□□□□ -0.79
NEK9-206ENST00000555537 HERVK_113Q902F9 699 aa10.13□□□□□ -0.79
NEK9-206ENST00000555537 DDX11Q96FC9 970 aa10.13□□□□□ -0.79
NEK9-206ENST00000555537 NUP88Q99567 741 aaPredicted RBP10.13□□□□□ -0.79
NEK9-206ENST00000555537 IL23AQ9NPF7 189 aa10.13□□□□□ -0.79
NEK9-206ENST00000555537 PPP1R9AQ9ULJ8 1098 aa10.13□□□□□ -0.79
NEK9-206ENST00000555537 NOP58Q9Y2X3 529 aaKnown RBP10.13□□□□□ -0.79
NEK9-206ENST00000555537 MROH7Q68CQ1 1323 aa10.12□□□□□ -0.79
NEK9-206ENST00000555537 TTC28Q96AY4 2481 aa10.12□□□□□ -0.79
NEK9-206ENST00000555537 REV3LO60673 3130 aa10.12□□□□□ -0.79
NEK9-206ENST00000555537 A0A0U1RQG5 324 aaPredicted RBP10.12□□□□□ -0.79
NEK9-206ENST00000555537 TCRBV5S4A2TA0A5A2 114 aa10.12□□□□□ -0.79
NEK9-206ENST00000555537 ZNF316A6NFI3 1004 aaPredicted RBP10.12□□□□□ -0.79
NEK9-206ENST00000555537 CHGBP05060 677 aa10.12□□□□□ -0.79
NEK9-206ENST00000555537 PTGS1P23219 599 aa10.12□□□□□ -0.79
NEK9-206ENST00000555537 CCDC144BQ3MJ40 725 aa10.12□□□□□ -0.79
NEK9-206ENST00000555537 SNRNP48Q6IEG0 339 aaKnown RBP10.12□□□□□ -0.79
NEK9-206ENST00000555537 PSRC1Q6PGN9 363 aaPredicted RBP10.12□□□□□ -0.79
NEK9-206ENST00000555537 MAMDC4Q6UXC1 1216 aa10.12□□□□□ -0.79
NEK9-206ENST00000555537 CPXCR1Q8N123 301 aa10.12□□□□□ -0.79
NEK9-206ENST00000555537 PCSK9Q8NBP7 692 aaKnown RBP10.12□□□□□ -0.79
NEK9-206ENST00000555537 LRFN3Q9BTN0 628 aa10.12□□□□□ -0.79
NEK9-206ENST00000555537 C1QTNF1Q9BXJ1 281 aa10.12□□□□□ -0.79
NEK9-206ENST00000555537 SH2D4AQ9H788 454 aa10.12□□□□□ -0.79
NEK9-206ENST00000555537 CERS4Q9HA82 394 aa10.12□□□□□ -0.79
NEK9-206ENST00000555537 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.12□□□□□ -0.79
NEK9-206ENST00000555537 SWAP70Q9UH65 585 aa10.12□□□□□ -0.79
NEK9-206ENST00000555537 EXOC6BQ9Y2D4 811 aa10.12□□□□□ -0.79
NEK9-206ENST00000555537 NAV1Q8NEY1 1877 aa10.12□□□□□ -0.79
NEK9-206ENST00000555537 PARP14Q460N5 1801 aa10.12□□□□□ -0.79
NEK9-206ENST00000555537 SYNGAP1Q96PV0 1343 aa10.11□□□□□ -0.79
NEK9-206ENST00000555537 DNAJC25-GNG10A0A024R161 153 aa10.11□□□□□ -0.79
NEK9-206ENST00000555537 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.11□□□□□ -0.79
NEK9-206ENST00000555537 USP17L12C9JPN9 530 aa10.11□□□□□ -0.79
NEK9-206ENST00000555537 USP17L21D6R901 530 aa10.11□□□□□ -0.79
NEK9-206ENST00000555537 GOLIM4O00461 696 aa10.11□□□□□ -0.79
NEK9-206ENST00000555537 CTAGE5O15320 804 aa10.11□□□□□ -0.79
NEK9-206ENST00000555537 TLR3O15455 904 aaKnown RBP10.11□□□□□ -0.79
NEK9-206ENST00000555537 CD4P01730 458 aa10.11□□□□□ -0.79
NEK9-206ENST00000555537 CST5P28325 142 aaPredicted RBP10.11□□□□□ -0.79
NEK9-206ENST00000555537 GJA9P57773 515 aa10.11□□□□□ -0.79
NEK9-206ENST00000555537 KRT40Q6A162 431 aa10.11□□□□□ -0.79
NEK9-206ENST00000555537 CXCL17Q6UXB2 119 aa10.11□□□□□ -0.79
NEK9-206ENST00000555537 STK11IPQ8N1F8 1099 aa10.11□□□□□ -0.79
NEK9-206ENST00000555537 FGD4Q96M96 766 aa10.11□□□□□ -0.79
NEK9-206ENST00000555537 DNAJC2Q99543 621 aaKnown RBP10.11□□□□□ -0.79
NEK9-206ENST00000555537 TSPYL2Q9H2G4 693 aaPredicted RBP10.11□□□□□ -0.79
NEK9-206ENST00000555537 IL1RAPL2Q9NP60 686 aa10.11□□□□□ -0.79
NEK9-206ENST00000555537 ROBO3Q96MS0 1386 aa10.11□□□□□ -0.79
NEK9-206ENST00000555537 GBF1Q92538 1859 aa10.1□□□□□ -0.79
NEK9-206ENST00000555537 TTF1Q15361 905 aaPredicted RBP10.1□□□□□ -0.79
NEK9-206ENST00000555537 C12orf60Q5U649 245 aa10.1□□□□□ -0.79
NEK9-206ENST00000555537 PPP2R2DQ66LE6 453 aa10.1□□□□□ -0.79
NEK9-206ENST00000555537 NOL8Q76FK4 1167 aaKnown RBP10.1□□□□□ -0.79
NEK9-206ENST00000555537 MSL3Q8N5Y2 521 aaKnown RBP10.1□□□□□ -0.79
NEK9-206ENST00000555537 KHSRPQ92945 711 aaKnown RBP eCLIP10.1□□□□□ -0.79
NEK9-206ENST00000555537 VWCEQ96DN2 955 aa10.1□□□□□ -0.79
NEK9-206ENST00000555537 SCLYQ96I15 445 aa10.1□□□□□ -0.79
NEK9-206ENST00000555537 CCDC17Q96LX7 622 aa10.1□□□□□ -0.79
NEK9-206ENST00000555537 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.1□□□□□ -0.79
NEK9-206ENST00000555537 TRPV6Q9H1D0 765 aa10.1□□□□□ -0.79
NEK9-206ENST00000555537 UPF3AQ9H1J1 476 aaKnown RBP10.1□□□□□ -0.79
NEK9-206ENST00000555537 HIPK3Q9H422 1215 aa10.1□□□□□ -0.79
NEK9-206ENST00000555537 KANSL2Q9H9L4 492 aa10.1□□□□□ -0.79
NEK9-206ENST00000555537 SPC25Q9HBM1 224 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms