RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 TCP11L1Q9NUJ3 509 aa14.02□□□□□ -0.17
VRK1-204ENST00000555351 H0YGN5 161 aa14.01□□□□□ -0.17
VRK1-204ENST00000555351 CYBAP13498 195 aa14.01□□□□□ -0.17
VRK1-204ENST00000555351 CCND3P30281 292 aaPredicted RBP14.01□□□□□ -0.17
VRK1-204ENST00000555351 CTDSPL2Q05D32 466 aa14.01□□□□□ -0.17
VRK1-204ENST00000555351 RCSD1Q6JBY9 416 aa14.01□□□□□ -0.17
VRK1-204ENST00000555351 ZNF589Q86UQ0 364 aaPredicted RBP14.01□□□□□ -0.17
VRK1-204ENST00000555351 FAM160B2Q86V87 743 aa14.01□□□□□ -0.17
VRK1-204ENST00000555351 MAML3Q96JK9 1138 aa14.01□□□□□ -0.17
VRK1-204ENST00000555351 MMP19Q99542 508 aa14.01□□□□□ -0.17
VRK1-204ENST00000555351 NUP88Q99567 741 aaPredicted RBP14.01□□□□□ -0.17
VRK1-204ENST00000555351 RNF41Q9H4P4 317 aaPredicted RBP14.01□□□□□ -0.17
VRK1-204ENST00000555351 IL17RBQ9NRM6 502 aa14.01□□□□□ -0.17
VRK1-204ENST00000555351 DIAPH3Q9NSV4 1193 aa14.01□□□□□ -0.17
VRK1-204ENST00000555351 FBXO40Q9UH90 709 aa14.01□□□□□ -0.17
VRK1-204ENST00000555351 DDX20Q9UHI6 824 aaKnown RBP14.01□□□□□ -0.17
VRK1-204ENST00000555351 FRMPD3Q5JV73 1810 aa14.01□□□□□ -0.17
VRK1-204ENST00000555351 RANBP6O60518 1105 aaKnown RBP14□□□□□ -0.17
VRK1-204ENST00000555351 COL6A1P12109 1028 aa14□□□□□ -0.17
VRK1-204ENST00000555351 STAT2P52630 851 aa14□□□□□ -0.17
VRK1-204ENST00000555351 LRRC47Q8N1G4 583 aaKnown RBP14□□□□□ -0.17
VRK1-204ENST00000555351 CHST13Q8NET6 341 aa14□□□□□ -0.17
VRK1-204ENST00000555351 STAG1Q8WVM7 1258 aa14□□□□□ -0.17
VRK1-204ENST00000555351 TTC14Q96N46 770 aa14□□□□□ -0.17
VRK1-204ENST00000555351 C11orf49Q9H6J7 331 aa14□□□□□ -0.17
VRK1-204ENST00000555351 STX8Q9UNK0 236 aa14□□□□□ -0.17
VRK1-204ENST00000555351 ZNFX1Q9P2E3 1918 aaKnown RBP14□□□□□ -0.17
VRK1-204ENST00000555351 SEPT4O43236 478 aa13.99□□□□□ -0.17
VRK1-204ENST00000555351 EVI5O60447 810 aa13.99□□□□□ -0.17
VRK1-204ENST00000555351 CYP2C19P33261 490 aa13.99□□□□□ -0.17
VRK1-204ENST00000555351 SLC1A4P43007 532 aa13.99□□□□□ -0.17
VRK1-204ENST00000555351 ZNF792Q3KQV3 632 aa13.99□□□□□ -0.17
VRK1-204ENST00000555351 HABP4Q5JVS0 413 aaKnown RBP13.99□□□□□ -0.17
VRK1-204ENST00000555351 AKNAD1Q5T1N1 836 aa13.99□□□□□ -0.17
VRK1-204ENST00000555351 SNRNP48Q6IEG0 339 aaKnown RBP13.99□□□□□ -0.17
VRK1-204ENST00000555351 SAMD1Q6SPF0 538 aaPredicted RBP13.99□□□□□ -0.17
VRK1-204ENST00000555351 ZNF467Q7Z7K2 595 aaPredicted RBP13.99□□□□□ -0.17
VRK1-204ENST00000555351 DIS3LQ8TF46 1054 aaKnown RBP13.99□□□□□ -0.17
VRK1-204ENST00000555351 DSCC1Q9BVC3 393 aa13.99□□□□□ -0.17
VRK1-204ENST00000555351 CTDP1Q9Y5B0 961 aaPredicted RBP13.99□□□□□ -0.17
VRK1-204ENST00000555351 LAMA4Q16363 1823 aa13.99□□□□□ -0.17
VRK1-204ENST00000555351 PLXNA1Q9UIW2 1896 aa13.98□□□□□ -0.17
VRK1-204ENST00000555351 DNAJC25-GNG10A0A024R161 153 aa13.98□□□□□ -0.17
VRK1-204ENST00000555351 TOP1P11387 765 aaKnown RBP13.98□□□□□ -0.17
VRK1-204ENST00000555351 TKFCQ3LXA3 575 aa13.98□□□□□ -0.17
VRK1-204ENST00000555351 MAMDC4Q6UXC1 1216 aa13.98□□□□□ -0.17
VRK1-204ENST00000555351 MFSD6Q6ZSS7 791 aa13.98□□□□□ -0.17
VRK1-204ENST00000555351 ARRDC4Q8NCT1 418 aa13.98□□□□□ -0.17
VRK1-204ENST00000555351 DCAF4Q8WV16 495 aa13.98□□□□□ -0.17
VRK1-204ENST00000555351 KIFC2Q96AC6 838 aa13.98□□□□□ -0.17
VRK1-204ENST00000555351 TINF2Q9BSI4 451 aa13.98□□□□□ -0.17
VRK1-204ENST00000555351 TACC3Q9Y6A5 838 aa13.98□□□□□ -0.17
VRK1-204ENST00000555351 RAD50Q92878 1312 aa13.97□□□□□ -0.17
VRK1-204ENST00000555351 SYNGAP1Q96PV0 1343 aa13.97□□□□□ -0.17
VRK1-204ENST00000555351 TMEM232C9JQI7 657 aa13.97□□□□□ -0.17
VRK1-204ENST00000555351 DNM1LO00429 736 aa13.97□□□□□ -0.17
VRK1-204ENST00000555351 ZNF213O14771 459 aa13.97□□□□□ -0.17
VRK1-204ENST00000555351 CNGA1P29973 690 aa13.97□□□□□ -0.17
VRK1-204ENST00000555351 CCDC178Q5BJE1 867 aa13.97□□□□□ -0.17
VRK1-204ENST00000555351 CWC27Q6UX04 472 aaKnown RBP13.97□□□□□ -0.17
VRK1-204ENST00000555351 BTNL9Q6UXG8 535 aa13.97□□□□□ -0.17
VRK1-204ENST00000555351 TRPV1Q8NER1 839 aa13.97□□□□□ -0.17
VRK1-204ENST00000555351 INCENPQ9NQS7 918 aa13.97□□□□□ -0.17
VRK1-204ENST00000555351 CTNNA3Q9UI47 895 aa13.97□□□□□ -0.17
VRK1-204ENST00000555351 PNMA2Q9UL42 364 aa13.97□□□□□ -0.17
VRK1-204ENST00000555351 ALPK3Q96L96 1907 aa13.97□□□□□ -0.17
VRK1-204ENST00000555351 PFASO15067 1338 aa13.96□□□□□ -0.17
VRK1-204ENST00000555351 A0A1W2PPC1 479 aa13.96□□□□□ -0.17
VRK1-204ENST00000555351 NMT2O60551 498 aa13.96□□□□□ -0.17
VRK1-204ENST00000555351 MCCP23508 829 aa13.96□□□□□ -0.17
VRK1-204ENST00000555351 PDE4AP27815 886 aa13.96□□□□□ -0.17
VRK1-204ENST00000555351 TTC22Q5TAA0 569 aa13.96□□□□□ -0.17
VRK1-204ENST00000555351 ESR2Q92731 530 aa13.96□□□□□ -0.17
VRK1-204ENST00000555351 DDX11Q96FC9 970 aa13.96□□□□□ -0.17
VRK1-204ENST00000555351 PRO3102Q9H379 93 aa13.96□□□□□ -0.17
VRK1-204ENST00000555351 RAVER2Q9HCJ3 691 aaKnown RBP13.96□□□□□ -0.17
VRK1-204ENST00000555351 TOMM22Q9NS69 142 aa13.96□□□□□ -0.17
VRK1-204ENST00000555351 RIPK3Q9Y572 518 aa13.96□□□□□ -0.17
VRK1-204ENST00000555351 PGK2P07205 417 aa13.95□□□□□ -0.18
VRK1-204ENST00000555351 RRP12Q5JTH9 1297 aaKnown RBP13.95□□□□□ -0.18
VRK1-204ENST00000555351 DGKHQ86XP1 1220 aa13.95□□□□□ -0.18
VRK1-204ENST00000555351 CPXCR1Q8N123 301 aa13.95□□□□□ -0.18
VRK1-204ENST00000555351 RUFY2Q8WXA3 655 aa13.95□□□□□ -0.18
VRK1-204ENST00000555351 TMEM47Q9BQJ4 181 aa13.95□□□□□ -0.18
VRK1-204ENST00000555351 COLQQ9Y215 455 aaPredicted RBP13.95□□□□□ -0.18
VRK1-204ENST00000555351 ZNF536O15090 1300 aa13.94□□□□□ -0.18
VRK1-204ENST00000555351 HAND2P61296 217 aa13.94□□□□□ -0.18
VRK1-204ENST00000555351 IKQ13123 557 aaPredicted RBP13.94□□□□□ -0.18
VRK1-204ENST00000555351 IMMTQ16891 758 aaKnown RBP13.94□□□□□ -0.18
VRK1-204ENST00000555351 IQCA1Q86XH1 822 aa13.94□□□□□ -0.18
VRK1-204ENST00000555351 TBC1D10CQ8IV04 446 aa13.94□□□□□ -0.18
VRK1-204ENST00000555351 ANKRD35Q8N283 1001 aa13.94□□□□□ -0.18
VRK1-204ENST00000555351 ANKS1AQ92625 1134 aa13.94□□□□□ -0.18
VRK1-204ENST00000555351 ACAD9Q9H845 621 aa13.94□□□□□ -0.18
VRK1-204ENST00000555351 CNNM2Q9H8M5 875 aa13.94□□□□□ -0.18
VRK1-204ENST00000555351 PRR12Q9ULL5 1215 aa13.94□□□□□ -0.18
VRK1-204ENST00000555351 CNPY2Q9Y2B0 182 aa13.94□□□□□ -0.18
VRK1-204ENST00000555351 KBTBD13C9JR72 458 aa13.93□□□□□ -0.18
VRK1-204ENST00000555351 ZNF865P0CJ78 1059 aaPredicted RBP13.93□□□□□ -0.18
VRK1-204ENST00000555351 SNHG28P0DPA3 235 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms