RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 KIFC2Q96AC6 838 aa16.64■□□□□ 0.25
CHD8-208ENST00000555301 LZTS2Q9BRK4 669 aa16.64■□□□□ 0.25
CHD8-208ENST00000555301 FBXO28Q9NVF7 368 aa16.64■□□□□ 0.25
CHD8-208ENST00000555301 WBP1LQ9NX94 342 aa16.64■□□□□ 0.25
CHD8-208ENST00000555301 GOLGA8AA7E2F4 631 aa16.63■□□□□ 0.25
CHD8-208ENST00000555301 KLRF2D3W0D1 207 aa16.63■□□□□ 0.25
CHD8-208ENST00000555301 RXRAP19793 462 aa16.63■□□□□ 0.25
CHD8-208ENST00000555301 PDIA3P30101 505 aaKnown RBP16.63■□□□□ 0.25
CHD8-208ENST00000555301 CRHR2Q13324 411 aa16.63■□□□□ 0.25
CHD8-208ENST00000555301 RTN1Q16799 776 aa16.63■□□□□ 0.25
CHD8-208ENST00000555301 SYDE2Q5VT97 1194 aa16.63■□□□□ 0.25
CHD8-208ENST00000555301 TTBK2Q6IQ55 1244 aa16.63■□□□□ 0.25
CHD8-208ENST00000555301 SAMD1Q6SPF0 538 aaPredicted RBP16.63■□□□□ 0.25
CHD8-208ENST00000555301 STAG2Q8N3U4 1231 aa16.63■□□□□ 0.25
CHD8-208ENST00000555301 ADAMTS5Q9UNA0 930 aa16.63■□□□□ 0.25
CHD8-208ENST00000555301 NID2Q14112 1375 aa16.63■□□□□ 0.25
CHD8-208ENST00000555301 ZBED4O75132 1171 aa16.62■□□□□ 0.25
CHD8-208ENST00000555301 SMARCA1P28370 1054 aa16.62■□□□□ 0.25
CHD8-208ENST00000555301 MCM2P49736 904 aa16.62■□□□□ 0.25
CHD8-208ENST00000555301 RAB11FIP4Q86YS3 637 aa16.62■□□□□ 0.25
CHD8-208ENST00000555301 CCDC144CPQ8IYA2 1237 aa16.62■□□□□ 0.25
CHD8-208ENST00000555301 ATG4CQ96DT6 458 aa16.62■□□□□ 0.25
CHD8-208ENST00000555301 PRR12Q9ULL5 1215 aa16.62■□□□□ 0.25
CHD8-208ENST00000555301 TPCN1Q9ULQ1 816 aa16.62■□□□□ 0.25
CHD8-208ENST00000555301 LIMCH1Q9UPQ0 1083 aa16.62■□□□□ 0.25
CHD8-208ENST00000555301 RABGAP1Q9Y3P9 1069 aa16.62■□□□□ 0.25
CHD8-208ENST00000555301 CTDP1Q9Y5B0 961 aaPredicted RBP16.62■□□□□ 0.25
CHD8-208ENST00000555301 PTPRFP10586 1907 aa16.61■□□□□ 0.25
CHD8-208ENST00000555301 VWA5AO00534 786 aa16.61■□□□□ 0.25
CHD8-208ENST00000555301 SLC16A2P36021 539 aa16.61■□□□□ 0.25
CHD8-208ENST00000555301 LARP6Q9BRS8 491 aaKnown RBP16.61■□□□□ 0.25
CHD8-208ENST00000555301 UBA5Q9GZZ9 404 aa16.61■□□□□ 0.25
CHD8-208ENST00000555301 SLC38A10Q9HBR0 1119 aa16.61■□□□□ 0.25
CHD8-208ENST00000555301 HPS5Q9UPZ3 1129 aa16.61■□□□□ 0.25
CHD8-208ENST00000555301 ADGRA2Q96PE1 1338 aa16.61■□□□□ 0.25
CHD8-208ENST00000555301 MYH4Q9Y623 1939 aa16.6■□□□□ 0.25
CHD8-208ENST00000555301 DHX16O60231 1041 aaKnown RBP16.6■□□□□ 0.25
CHD8-208ENST00000555301 TBC1D8O95759 1140 aa16.6■□□□□ 0.25
CHD8-208ENST00000555301 FAM110CQ1W6H9 321 aa16.6■□□□□ 0.25
CHD8-208ENST00000555301 C17orf99Q6UX52 265 aa16.6■□□□□ 0.25
CHD8-208ENST00000555301 TMTC3Q6ZXV5 915 aa16.6■□□□□ 0.25
CHD8-208ENST00000555301 NOL8Q76FK4 1167 aaKnown RBP16.6■□□□□ 0.25
CHD8-208ENST00000555301 ADGRF4Q8IZF3 695 aa16.6■□□□□ 0.25
CHD8-208ENST00000555301 ZSCAN31Q96LW9 406 aaPredicted RBP16.6■□□□□ 0.25
CHD8-208ENST00000555301 SPZ1Q9BXG8 430 aa16.6■□□□□ 0.25
CHD8-208ENST00000555301 SLKQ9H2G2 1235 aaPredicted RBP16.6■□□□□ 0.25
CHD8-208ENST00000555301 RANBP17Q9H2T7 1088 aaKnown RBP16.6■□□□□ 0.25
CHD8-208ENST00000555301 RBPJLQ9UBG7 517 aa16.6■□□□□ 0.25
CHD8-208ENST00000555301 MORF4L1Q9UBU8 362 aa16.6■□□□□ 0.25
CHD8-208ENST00000555301 CPA4Q9UI42 421 aa16.6■□□□□ 0.25
CHD8-208ENST00000555301 PFKFB2O60825 505 aa16.59■□□□□ 0.25
CHD8-208ENST00000555301 BCRP11274 1271 aa16.59■□□□□ 0.25
CHD8-208ENST00000555301 OAZ1P54368 228 aa16.59■□□□□ 0.25
CHD8-208ENST00000555301 NOM1Q5C9Z4 860 aaKnown RBP16.59■□□□□ 0.25
CHD8-208ENST00000555301 CPLX2Q6PUV4 134 aaKnown RBP16.59■□□□□ 0.25
CHD8-208ENST00000555301 ANKRD13CQ8N6S4 541 aa16.59■□□□□ 0.25
CHD8-208ENST00000555301 GPRC5AQ8NFJ5 357 aa16.59■□□□□ 0.25
CHD8-208ENST00000555301 PAGR1Q9BTK6 254 aa16.59■□□□□ 0.25
CHD8-208ENST00000555301 RIOX1Q9H6W3 641 aa16.59■□□□□ 0.25
CHD8-208ENST00000555301 FAM217BQ9NTX9 383 aaPredicted RBP16.59■□□□□ 0.25
CHD8-208ENST00000555301 PNMA2Q9UL42 364 aa16.59■□□□□ 0.25
CHD8-208ENST00000555301 ATP2A1O14983 1001 aa16.58■□□□□ 0.24
CHD8-208ENST00000555301 PLEKHA8P1O95397 391 aa16.58■□□□□ 0.24
CHD8-208ENST00000555301 CDC27P30260 824 aa16.58■□□□□ 0.24
CHD8-208ENST00000555301 ADD1P35611 737 aaKnown RBP16.58■□□□□ 0.24
CHD8-208ENST00000555301 ERVK-9P63128 1117 aa16.58■□□□□ 0.24
CHD8-208ENST00000555301 ERVK-24P63145 666 aa16.58■□□□□ 0.24
CHD8-208ENST00000555301 CCT2P78371 535 aaKnown RBP16.58■□□□□ 0.24
CHD8-208ENST00000555301 CCNA1P78396 465 aa16.58■□□□□ 0.24
CHD8-208ENST00000555301 STK3Q13188 491 aa16.58■□□□□ 0.24
CHD8-208ENST00000555301 TMEM132BQ14DG7 1078 aa16.58■□□□□ 0.24
CHD8-208ENST00000555301 ME3Q16798 604 aa16.58■□□□□ 0.24
CHD8-208ENST00000555301 SRBD1Q8N5C6 995 aaKnown RBP16.58■□□□□ 0.24
CHD8-208ENST00000555301 REPS2Q8NFH8 660 aa16.58■□□□□ 0.24
CHD8-208ENST00000555301 CPVLQ9H3G5 476 aa16.58■□□□□ 0.24
CHD8-208ENST00000555301 JMJD4Q9H9V9 463 aa16.58■□□□□ 0.24
CHD8-208ENST00000555301 VAT1LQ9HCJ6 419 aa16.58■□□□□ 0.24
CHD8-208ENST00000555301 TXNRD2Q9NNW7 524 aa16.58■□□□□ 0.24
CHD8-208ENST00000555301 SH2B1Q9NRF2 756 aaPredicted RBP16.58■□□□□ 0.24
CHD8-208ENST00000555301 BTBD7Q9P203 1132 aa16.58■□□□□ 0.24
CHD8-208ENST00000555301 CPLX1O14810 134 aa16.57■□□□□ 0.24
CHD8-208ENST00000555301 CYTH3O43739 400 aa16.57■□□□□ 0.24
CHD8-208ENST00000555301 CNMDO75829 334 aa16.57■□□□□ 0.24
CHD8-208ENST00000555301 COPB2P35606 906 aa16.57■□□□□ 0.24
CHD8-208ENST00000555301 STAT3P40763 770 aa16.57■□□□□ 0.24
CHD8-208ENST00000555301 SCRN1Q12765 414 aa16.57■□□□□ 0.24
CHD8-208ENST00000555301 CDC37Q16543 378 aaPredicted RBP16.57■□□□□ 0.24
CHD8-208ENST00000555301 POTEEQ6S8J3 1075 aa16.57■□□□□ 0.24
CHD8-208ENST00000555301 NBPF11Q86T75 865 aa16.57■□□□□ 0.24
CHD8-208ENST00000555301 MTMR8Q96EF0 704 aa16.57■□□□□ 0.24
CHD8-208ENST00000555301 TEX13BQ9BXU2 312 aa16.57■□□□□ 0.24
CHD8-208ENST00000555301 SPATC1LQ9H0A9 340 aa16.57■□□□□ 0.24
CHD8-208ENST00000555301 R3HDMLQ9H3Y0 253 aa16.57■□□□□ 0.24
CHD8-208ENST00000555301 ZNF214Q9UL59 606 aaPredicted RBP16.57■□□□□ 0.24
CHD8-208ENST00000555301 GPR25O00155 361 aa16.56■□□□□ 0.24
CHD8-208ENST00000555301 ZBTB5O15062 677 aa16.56■□□□□ 0.24
CHD8-208ENST00000555301 CDKL5O76039 1030 aa16.56■□□□□ 0.24
CHD8-208ENST00000555301 SLC25A27O95847 323 aa16.56■□□□□ 0.24
CHD8-208ENST00000555301 ICAM1P05362 532 aa16.56■□□□□ 0.24
CHD8-208ENST00000555301 IFNAR1P17181 557 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms