RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-231ENST00000554994 ERVV-1B6SEH8 477 aa5.91□□□□□ -1.46
ATXN3-231ENST00000554994 IGF2BP3O00425 579 aaKnown RBP eCLIP5.91□□□□□ -1.46
ATXN3-231ENST00000554994 PSMD14O00487 310 aa5.91□□□□□ -1.46
ATXN3-231ENST00000554994 MED26O95402 600 aa5.91□□□□□ -1.46
ATXN3-231ENST00000554994 DDX58O95786 925 aaKnown RBP5.91□□□□□ -1.46
ATXN3-231ENST00000554994 CRHR2Q13324 411 aa5.91□□□□□ -1.46
ATXN3-231ENST00000554994 CCINQ13939 588 aa5.91□□□□□ -1.46
ATXN3-231ENST00000554994 PERM1Q5SV97 790 aa5.91□□□□□ -1.46
ATXN3-231ENST00000554994 ANGEL2Q5VTE6 544 aaKnown RBP5.91□□□□□ -1.46
ATXN3-231ENST00000554994 ELMSAN1Q6PJG2 1045 aa5.91□□□□□ -1.46
ATXN3-231ENST00000554994 CLEC4GQ6UXB4 293 aa5.91□□□□□ -1.46
ATXN3-231ENST00000554994 KRT25Q7Z3Z0 450 aa5.91□□□□□ -1.46
ATXN3-231ENST00000554994 PPP1R42Q7Z4L9 355 aa5.91□□□□□ -1.46
ATXN3-231ENST00000554994 MAFAQ8NHW3 353 aaPredicted RBP5.91□□□□□ -1.46
ATXN3-231ENST00000554994 MYD88Q99836 296 aa5.91□□□□□ -1.46
ATXN3-231ENST00000554994 LPIN3Q9BQK8 851 aa5.91□□□□□ -1.46
ATXN3-231ENST00000554994 NYXQ9GZU5 481 aa5.91□□□□□ -1.46
ATXN3-231ENST00000554994 TRMT112Q9UI30 125 aaKnown RBP5.91□□□□□ -1.46
ATXN3-231ENST00000554994 ZMYND8Q9ULU4 1186 aaPredicted RBP5.91□□□□□ -1.46
ATXN3-231ENST00000554994 PPP1R12BO60237 982 aaPredicted RBP5.9□□□□□ -1.46
ATXN3-231ENST00000554994 VAMP4O75379 141 aa5.9□□□□□ -1.46
ATXN3-231ENST00000554994 SOX11P35716 441 aa5.9□□□□□ -1.46
ATXN3-231ENST00000554994 FKBP1BP68106 108 aa5.9□□□□□ -1.46
ATXN3-231ENST00000554994 SP3Q02447 781 aa5.9□□□□□ -1.46
ATXN3-231ENST00000554994 PTPN12Q05209 780 aaKnown RBP5.9□□□□□ -1.46
ATXN3-231ENST00000554994 TCIRG1Q13488 830 aa5.9□□□□□ -1.46
ATXN3-231ENST00000554994 GRIK5Q16478 980 aa5.9□□□□□ -1.46
ATXN3-231ENST00000554994 CRY2Q49AN0 593 aa5.9□□□□□ -1.46
ATXN3-231ENST00000554994 HSP90AB3PQ58FF7 597 aa5.9□□□□□ -1.46
ATXN3-231ENST00000554994 SUSD4Q5VX71 490 aa5.9□□□□□ -1.46
ATXN3-231ENST00000554994 ALDH16A1Q8IZ83 802 aa5.9□□□□□ -1.46
ATXN3-231ENST00000554994 PLBD2Q8NHP8 589 aa5.9□□□□□ -1.46
ATXN3-231ENST00000554994 YTHDC1Q96MU7 727 aaKnown RBP5.9□□□□□ -1.46
ATXN3-231ENST00000554994 UTP14AQ9BVJ6 771 aaKnown RBP5.9□□□□□ -1.46
ATXN3-231ENST00000554994 FZD1Q9UP38 647 aa5.9□□□□□ -1.46
ATXN3-231ENST00000554994 MAP3K2Q9Y2U5 619 aa5.9□□□□□ -1.46
ATXN3-231ENST00000554994 IL16Q14005 1332 aa5.9□□□□□ -1.47
ATXN3-231ENST00000554994 FANCIQ9NVI1 1328 aa5.9□□□□□ -1.47
ATXN3-231ENST00000554994 PIEZO1Q92508 2521 aa5.9□□□□□ -1.47
ATXN3-231ENST00000554994 RIC1Q4ADV7 1423 aa5.9□□□□□ -1.47
ATXN3-231ENST00000554994 E9PSI1 815 aa5.89□□□□□ -1.47
ATXN3-231ENST00000554994 DEAF1O75398 565 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-231ENST00000554994 FARP2O94887 1054 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-231ENST00000554994 TGFB1P01137 390 aa5.89□□□□□ -1.47
ATXN3-231ENST00000554994 HOXB7P09629 217 aa5.89□□□□□ -1.47
ATXN3-231ENST00000554994 HCLS1P14317 486 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-231ENST00000554994 KIAA2012Q0VF49 1180 aa5.89□□□□□ -1.47
ATXN3-231ENST00000554994 NEXNQ0ZGT2 675 aa5.89□□□□□ -1.47
ATXN3-231ENST00000554994 FKBP5Q13451 457 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-231ENST00000554994 SLC4A10Q6U841 1118 aa5.89□□□□□ -1.47
ATXN3-231ENST00000554994 DPP8Q6V1X1 898 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-231ENST00000554994 HFE2Q6ZVN8 426 aa5.89□□□□□ -1.47
ATXN3-231ENST00000554994 G2E3Q7L622 706 aa5.89□□□□□ -1.47
ATXN3-231ENST00000554994 UBE2Q1Q7Z7E8 422 aa5.89□□□□□ -1.47
ATXN3-231ENST00000554994 ZNF34Q8IZ26 560 aa5.89□□□□□ -1.47
ATXN3-231ENST00000554994 GDF15Q99988 308 aa5.89□□□□□ -1.47
ATXN3-231ENST00000554994 TMX4Q9H1E5 349 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-231ENST00000554994 DBNDD1Q9H9R9 158 aa5.89□□□□□ -1.47
ATXN3-231ENST00000554994 KCNQ5Q9NR82 932 aa5.89□□□□□ -1.47
ATXN3-231ENST00000554994 KIAA1024Q9UPX6 916 aa5.89□□□□□ -1.47
ATXN3-231ENST00000554994 ZSWIM8A7E2V4 1837 aa5.88□□□□□ -1.47
ATXN3-231ENST00000554994 PI4KAP2A4QPH2 592 aa5.88□□□□□ -1.47
ATXN3-231ENST00000554994 USP17L5A8MUK1 530 aa5.88□□□□□ -1.47
ATXN3-231ENST00000554994 GLB1P16278 677 aa5.88□□□□□ -1.47
ATXN3-231ENST00000554994 SYN1P17600 705 aa5.88□□□□□ -1.47
ATXN3-231ENST00000554994 SLFN5Q08AF3 891 aa5.88□□□□□ -1.47
ATXN3-231ENST00000554994 LRIT3Q3SXY7 679 aa5.88□□□□□ -1.47
ATXN3-231ENST00000554994 PARP10Q53GL7 1025 aa5.88□□□□□ -1.47
ATXN3-231ENST00000554994 CCDC102BQ68D86 513 aa5.88□□□□□ -1.47
ATXN3-231ENST00000554994 KSR2Q6VAB6 950 aa5.88□□□□□ -1.47
ATXN3-231ENST00000554994 NLRP10Q86W26 655 aa5.88□□□□□ -1.47
ATXN3-231ENST00000554994 DZIP1LQ8IYY4 767 aaKnown RBP5.88□□□□□ -1.47
ATXN3-231ENST00000554994 C7orf61Q8IZ16 206 aa5.88□□□□□ -1.47
ATXN3-231ENST00000554994 PI4KAP1Q8N8J0 262 aa5.88□□□□□ -1.47
ATXN3-231ENST00000554994 SUPT20HQ8NEM7 779 aa5.88□□□□□ -1.47
ATXN3-231ENST00000554994 DPF2Q92785 391 aa5.88□□□□□ -1.47
ATXN3-231ENST00000554994 FAM89AQ96GI7 184 aa5.88□□□□□ -1.47
ATXN3-231ENST00000554994 RBM17Q96I25 401 aaKnown RBP5.88□□□□□ -1.47
ATXN3-231ENST00000554994 ARHGAP39Q9C0H5 1083 aa5.88□□□□□ -1.47
ATXN3-231ENST00000554994 SMG9Q9H0W8 520 aaKnown RBP5.88□□□□□ -1.47
ATXN3-231ENST00000554994 SYNGAP1Q96PV0 1343 aa5.88□□□□□ -1.47
ATXN3-231ENST00000554994 DDX60Q8IY21 1712 aaKnown RBP5.88□□□□□ -1.47
ATXN3-231ENST00000554994 EYSQ5T1H1 3165 aa5.87□□□□□ -1.47
ATXN3-231ENST00000554994 MANSC4A6NHS7 340 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-231ENST00000554994 F6X3S4 739 aa5.87□□□□□ -1.47
ATXN3-231ENST00000554994 LZTS3O60299 673 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-231ENST00000554994 IGLV1-40P01703 118 aa5.87□□□□□ -1.47
ATXN3-231ENST00000554994 HOXA10P31260 410 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-231ENST00000554994 MAGEA10P43363 369 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-231ENST00000554994 PCSK7Q16549 785 aa5.87□□□□□ -1.47
ATXN3-231ENST00000554994 DDX46Q7L014 1031 aaKnown RBP5.87□□□□□ -1.47
ATXN3-231ENST00000554994 TRIM50Q86XT4 487 aa5.87□□□□□ -1.47
ATXN3-231ENST00000554994 TDHQ8IZJ6 230 aa5.87□□□□□ -1.47
ATXN3-231ENST00000554994 AGGF1Q8N302 714 aaeCLIP5.87□□□□□ -1.47
ATXN3-231ENST00000554994 CDX2Q99626 313 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-231ENST00000554994 METTL22Q9BUU2 404 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-231ENST00000554994 RTFDC1Q9BY42 306 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-231ENST00000554994 CWC25Q9NXE8 425 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-231ENST00000554994 FRRS1LQ9P0K9 344 aa5.87□□□□□ -1.47
ATXN3-231ENST00000554994 RAXQ9Y2V3 346 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms