RNA–Protein interactions for RNA: ENST00000554943.5

PPP4R3A-206, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5 BASIC

Gene PPP4R3A, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-206ENST00000554943 ADGRG1Q9Y653 693 aa14.31□□□□□ -0.12
PPP4R3A-206ENST00000554943 CFAP100Q494V2 611 aa14.31□□□□□ -0.12
PPP4R3A-206ENST00000554943 PRR5LQ6MZQ0 368 aa14.31□□□□□ -0.12
PPP4R3A-206ENST00000554943 NEDD1Q8NHV4 660 aa14.31□□□□□ -0.12
PPP4R3A-206ENST00000554943 DHX58Q96C10 678 aa14.31□□□□□ -0.12
PPP4R3A-206ENST00000554943 WDR24Q96S15 920 aa14.31□□□□□ -0.12
PPP4R3A-206ENST00000554943 MRPL44Q9H9J2 332 aaKnown RBP14.31□□□□□ -0.12
PPP4R3A-206ENST00000554943 EP400Q96L91 3159 aa14.3□□□□□ -0.12
PPP4R3A-206ENST00000554943 hCG_1642624A0A1W2PR95 340 aa14.3□□□□□ -0.12
PPP4R3A-206ENST00000554943 CASP1P29466 404 aa14.3□□□□□ -0.12
PPP4R3A-206ENST00000554943 CLK2P49760 499 aaKnown RBP14.3□□□□□ -0.12
PPP4R3A-206ENST00000554943 GPSM2P81274 684 aa14.3□□□□□ -0.12
PPP4R3A-206ENST00000554943 ZNF174Q15697 407 aa14.3□□□□□ -0.12
PPP4R3A-206ENST00000554943 GIMAP8Q8ND71 665 aaPredicted RBP14.3□□□□□ -0.12
PPP4R3A-206ENST00000554943 PNMA1Q8ND90 353 aa14.3□□□□□ -0.12
PPP4R3A-206ENST00000554943 MTMR8Q96EF0 704 aa14.3□□□□□ -0.12
PPP4R3A-206ENST00000554943 CTAGE1Q96RT6 745 aa14.3□□□□□ -0.12
PPP4R3A-206ENST00000554943 MAGEF1Q9HAY2 307 aa14.3□□□□□ -0.12
PPP4R3A-206ENST00000554943 KIF5BP33176 963 aa14.3□□□□□ -0.12
PPP4R3A-206ENST00000554943 ARHGAP25P42331 645 aa14.3□□□□□ -0.12
PPP4R3A-206ENST00000554943 CCDC82Q8N4S0 544 aa14.3□□□□□ -0.12
PPP4R3A-206ENST00000554943 IGSF22Q8N9C0 903 aa14.3□□□□□ -0.12
PPP4R3A-206ENST00000554943 IQUBQ8NA54 791 aa14.3□□□□□ -0.12
PPP4R3A-206ENST00000554943 TMEM47Q9BQJ4 181 aa14.3□□□□□ -0.12
PPP4R3A-206ENST00000554943 MMTAG2Q9BU76 263 aaKnown RBP14.3□□□□□ -0.12
PPP4R3A-206ENST00000554943 EFCAB8A8MWE9 144 aa14.3□□□□□ -0.12
PPP4R3A-206ENST00000554943 ZSCAN29Q8IWY8 852 aaPredicted RBP14.3□□□□□ -0.12
PPP4R3A-206ENST00000554943 CTCFLQ8NI51 663 aaPredicted RBP14.3□□□□□ -0.12
PPP4R3A-206ENST00000554943 MTMR9Q96QG7 549 aa14.3□□□□□ -0.12
PPP4R3A-206ENST00000554943 TMEM60Q9H2L4 133 aa14.3□□□□□ -0.12
PPP4R3A-206ENST00000554943 GNPATO15228 680 aa14.29□□□□□ -0.12
PPP4R3A-206ENST00000554943 ZSCAN12O43309 604 aa14.29□□□□□ -0.12
PPP4R3A-206ENST00000554943 GSTO1P78417 241 aa14.29□□□□□ -0.12
PPP4R3A-206ENST00000554943 RBL2Q08999 1139 aa14.29□□□□□ -0.12
PPP4R3A-206ENST00000554943 MSL3Q8N5Y2 521 aaKnown RBP14.29□□□□□ -0.12
PPP4R3A-206ENST00000554943 DNAJC7Q99615 494 aa14.29□□□□□ -0.12
PPP4R3A-206ENST00000554943 RTCBQ9Y3I0 505 aaKnown RBP14.29□□□□□ -0.12
PPP4R3A-206ENST00000554943 BAZ2BQ9UIF8 2168 aaKnown RBP14.29□□□□□ -0.12
PPP4R3A-206ENST00000554943 A0A1W2PQC6 194 aa14.29□□□□□ -0.12
PPP4R3A-206ENST00000554943 TFAP4Q01664 338 aa14.29□□□□□ -0.12
PPP4R3A-206ENST00000554943 KRT31Q15323 416 aa14.29□□□□□ -0.12
PPP4R3A-206ENST00000554943 ZRSR1Q15695 479 aaKnown RBP14.29□□□□□ -0.12
PPP4R3A-206ENST00000554943 ELF2Q15723 593 aa14.29□□□□□ -0.12
PPP4R3A-206ENST00000554943 TCP11X2Q5H9J9 407 aa14.29□□□□□ -0.12
PPP4R3A-206ENST00000554943 PIK3AP1Q6ZUJ8 805 aa14.29□□□□□ -0.12
PPP4R3A-206ENST00000554943 CUEDC2Q9H467 287 aa14.29□□□□□ -0.12
PPP4R3A-206ENST00000554943 GYS1P13807 737 aa14.28□□□□□ -0.12
PPP4R3A-206ENST00000554943 ERVK-24P63145 666 aa14.28□□□□□ -0.12
PPP4R3A-206ENST00000554943 FAM193AP78312 1265 aa14.28□□□□□ -0.12
PPP4R3A-206ENST00000554943 MEA1Q16626 185 aa14.28□□□□□ -0.12
PPP4R3A-206ENST00000554943 TTI2Q6NXR4 508 aa14.28□□□□□ -0.12
PPP4R3A-206ENST00000554943 DYNLL2Q96FJ2 89 aa14.28□□□□□ -0.12
PPP4R3A-206ENST00000554943 GTPBP4Q9BZE4 634 aaKnown RBP14.28□□□□□ -0.12
PPP4R3A-206ENST00000554943 BRMS1Q9HCU9 246 aa14.28□□□□□ -0.12
PPP4R3A-206ENST00000554943 GNAQP50148 359 aa14.28□□□□□ -0.12
PPP4R3A-206ENST00000554943 FXR1P51114 621 aaKnown RBP eCLIP14.28□□□□□ -0.12
PPP4R3A-206ENST00000554943 C7orf25Q9BPX7 421 aa14.28□□□□□ -0.12
PPP4R3A-206ENST00000554943 CD209Q9NNX6 404 aa14.28□□□□□ -0.12
PPP4R3A-206ENST00000554943 CCNL1Q9UK58 526 aaPredicted RBP14.28□□□□□ -0.12
PPP4R3A-206ENST00000554943 COL2A1P02458 1487 aaPredicted RBP14.28□□□□□ -0.12
PPP4R3A-206ENST00000554943 AKR1B15C9JRZ8 316 aaPredicted RBP14.28□□□□□ -0.12
PPP4R3A-206ENST00000554943 hCG_1984214I3L0E3 225 aa14.28□□□□□ -0.12
PPP4R3A-206ENST00000554943 RPN1P04843 607 aaKnown RBP14.28□□□□□ -0.12
PPP4R3A-206ENST00000554943 ADKP55263 362 aaKnown RBP14.28□□□□□ -0.12
PPP4R3A-206ENST00000554943 ZNF713Q8N859 430 aaPredicted RBP14.28□□□□□ -0.12
PPP4R3A-206ENST00000554943 AK8Q96MA6 479 aa14.28□□□□□ -0.12
PPP4R3A-206ENST00000554943 LDHBP07195 334 aaKnown RBP14.27□□□□□ -0.12
PPP4R3A-206ENST00000554943 PMS1P54277 932 aaKnown RBP14.27□□□□□ -0.12
PPP4R3A-206ENST00000554943 AMPD2Q01433 879 aa14.27□□□□□ -0.12
PPP4R3A-206ENST00000554943 PTPN21Q16825 1174 aa14.27□□□□□ -0.12
PPP4R3A-206ENST00000554943 CRAMP1Q96RY5 1269 aa14.27□□□□□ -0.12
PPP4R3A-206ENST00000554943 DUSP9Q99956 384 aaKnown RBP14.27□□□□□ -0.12
PPP4R3A-206ENST00000554943 SUGT1Q9Y2Z0 365 aa14.27□□□□□ -0.12
PPP4R3A-206ENST00000554943 REXO2Q9Y3B8 237 aaKnown RBP14.27□□□□□ -0.12
PPP4R3A-206ENST00000554943 USP17L3A6NCW0 530 aa14.27□□□□□ -0.13
PPP4R3A-206ENST00000554943 USP17L4A6NCW7 530 aa14.27□□□□□ -0.13
PPP4R3A-206ENST00000554943 ATP8B1O43520 1251 aa14.27□□□□□ -0.13
PPP4R3A-206ENST00000554943 PRCPP42785 496 aa14.27□□□□□ -0.13
PPP4R3A-206ENST00000554943 MTF1Q14872 753 aa14.27□□□□□ -0.13
PPP4R3A-206ENST00000554943 USP17L1Q7RTZ2 530 aa14.27□□□□□ -0.13
PPP4R3A-206ENST00000554943 THAP9Q9H5L6 903 aa14.26□□□□□ -0.13
PPP4R3A-206ENST00000554943 MCM9Q9NXL9 1143 aa14.26□□□□□ -0.13
PPP4R3A-206ENST00000554943 A0A0U1RQJ8 604 aa14.26□□□□□ -0.13
PPP4R3A-206ENST00000554943 ZPR1O75312 459 aa14.26□□□□□ -0.13
PPP4R3A-206ENST00000554943 ATP2B4P23634 1241 aa14.26□□□□□ -0.13
PPP4R3A-206ENST00000554943 HOXA7P31268 230 aaPredicted RBP14.26□□□□□ -0.13
PPP4R3A-206ENST00000554943 ATRIPQ8WXE1 791 aa14.26□□□□□ -0.13
PPP4R3A-206ENST00000554943 PURBQ96QR8 312 aaKnown RBP14.26□□□□□ -0.13
PPP4R3A-206ENST00000554943 ABHD10Q9NUJ1 306 aa14.26□□□□□ -0.13
PPP4R3A-206ENST00000554943 SOWAHDA6NJG2 315 aa14.26□□□□□ -0.13
PPP4R3A-206ENST00000554943 CDK8P49336 464 aa14.26□□□□□ -0.13
PPP4R3A-206ENST00000554943 AKAP17AQ02040 695 aaKnown RBP14.26□□□□□ -0.13
PPP4R3A-206ENST00000554943 SMYD4Q8IYR2 804 aaPredicted RBP14.26□□□□□ -0.13
PPP4R3A-206ENST00000554943 PDILTQ8N807 584 aa14.26□□□□□ -0.13
PPP4R3A-206ENST00000554943 POLLQ9UGP5 575 aa14.26□□□□□ -0.13
PPP4R3A-206ENST00000554943 H7C1D1 291 aa14.25□□□□□ -0.13
PPP4R3A-206ENST00000554943 POLRMTO00411 1230 aaKnown RBP14.25□□□□□ -0.13
PPP4R3A-206ENST00000554943 USP5P45974 858 aa14.25□□□□□ -0.13
PPP4R3A-206ENST00000554943 GABPB1Q06547 395 aaPredicted RBP14.25□□□□□ -0.13
PPP4R3A-206ENST00000554943 TRIM14Q14142 442 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms