RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 A0A1B0GTH6 734 aa13.32□□□□□ -0.28
XRCC3-208ENST00000554811 AKR1B10O60218 316 aa13.32□□□□□ -0.28
XRCC3-208ENST00000554811 TYW1BQ6NUM6 668 aa13.32□□□□□ -0.28
XRCC3-208ENST00000554811 USP17L2Q6R6M4 530 aa13.32□□□□□ -0.28
XRCC3-208ENST00000554811 TXNRD3Q86VQ6 643 aa13.32□□□□□ -0.28
XRCC3-208ENST00000554811 SHISA4Q96DD7 197 aa13.32□□□□□ -0.28
XRCC3-208ENST00000554811 FAM84BQ96KN1 310 aaPredicted RBP13.32□□□□□ -0.28
XRCC3-208ENST00000554811 GSDMAQ96QA5 445 aa13.32□□□□□ -0.28
XRCC3-208ENST00000554811 RBM28Q9NW13 759 aaKnown RBP13.32□□□□□ -0.28
XRCC3-208ENST00000554811 MINPP1Q9UNW1 487 aa13.32□□□□□ -0.28
XRCC3-208ENST00000554811 EPN1Q9Y6I3 576 aaPredicted RBP13.32□□□□□ -0.28
XRCC3-208ENST00000554811 TTC26A0AVF1 554 aa13.32□□□□□ -0.28
XRCC3-208ENST00000554811 ZNF18P17022 549 aa13.32□□□□□ -0.28
XRCC3-208ENST00000554811 TNNI2P48788 182 aa13.32□□□□□ -0.28
XRCC3-208ENST00000554811 RPS8P62241 208 aaKnown RBP13.32□□□□□ -0.28
XRCC3-208ENST00000554811 VSNL1P62760 191 aa13.32□□□□□ -0.28
XRCC3-208ENST00000554811 LRRC41Q15345 812 aa13.32□□□□□ -0.28
XRCC3-208ENST00000554811 TRIML1Q8N9V2 468 aa13.32□□□□□ -0.28
XRCC3-208ENST00000554811 NOC4LQ9BVI4 516 aaKnown RBP13.32□□□□□ -0.28
XRCC3-208ENST00000554811 ERVK-24P63145 666 aa13.31□□□□□ -0.28
XRCC3-208ENST00000554811 IKQ13123 557 aaPredicted RBP13.31□□□□□ -0.28
XRCC3-208ENST00000554811 SPA17Q15506 151 aa13.31□□□□□ -0.28
XRCC3-208ENST00000554811 ZSCAN26Q16670 478 aa13.31□□□□□ -0.28
XRCC3-208ENST00000554811 KRT26Q7Z3Y9 468 aa13.31□□□□□ -0.28
XRCC3-208ENST00000554811 CLEC10AQ8IUN9 316 aa13.31□□□□□ -0.28
XRCC3-208ENST00000554811 FBXL16Q8N461 479 aa13.31□□□□□ -0.28
XRCC3-208ENST00000554811 RIN2Q8WYP3 895 aaPredicted RBP13.31□□□□□ -0.28
XRCC3-208ENST00000554811 RABGGTAQ92696 567 aa13.31□□□□□ -0.28
XRCC3-208ENST00000554811 GJA10Q969M2 543 aa13.31□□□□□ -0.28
XRCC3-208ENST00000554811 CRACR2AQ9BSW2 395 aa13.31□□□□□ -0.28
XRCC3-208ENST00000554811 GPCPD1Q9NPB8 672 aa13.31□□□□□ -0.28
XRCC3-208ENST00000554811 DCP1AQ9NPI6 582 aaPredicted RBP13.31□□□□□ -0.28
XRCC3-208ENST00000554811 ABHD10Q9NUJ1 306 aa13.31□□□□□ -0.28
XRCC3-208ENST00000554811 SEC63Q9UGP8 760 aaKnown RBP13.31□□□□□ -0.28
XRCC3-208ENST00000554811 G3V3G9 751 aa13.31□□□□□ -0.28
XRCC3-208ENST00000554811 PRPF3O43395 683 aaKnown RBP13.31□□□□□ -0.28
XRCC3-208ENST00000554811 CACNB1Q02641 598 aaPredicted RBP13.31□□□□□ -0.28
XRCC3-208ENST00000554811 PARP10Q53GL7 1025 aa13.31□□□□□ -0.28
XRCC3-208ENST00000554811 DCAF8Q5TAQ9 597 aa13.31□□□□□ -0.28
XRCC3-208ENST00000554811 CACNA2D4Q7Z3S7 1137 aa13.31□□□□□ -0.28
XRCC3-208ENST00000554811 PHF20Q9BVI0 1012 aa13.31□□□□□ -0.28
XRCC3-208ENST00000554811 TMEM60Q9H2L4 133 aa13.31□□□□□ -0.28
XRCC3-208ENST00000554811 NLRC4Q9NPP4 1024 aa13.31□□□□□ -0.28
XRCC3-208ENST00000554811 MRC1P22897 1456 aa13.31□□□□□ -0.28
XRCC3-208ENST00000554811 PPP1R3GB7ZBB8 358 aa13.31□□□□□ -0.28
XRCC3-208ENST00000554811 ZNF185O15231 689 aa13.31□□□□□ -0.28
XRCC3-208ENST00000554811 KRT18P05783 430 aaKnown RBP13.31□□□□□ -0.28
XRCC3-208ENST00000554811 LDHBP07195 334 aaKnown RBP13.31□□□□□ -0.28
XRCC3-208ENST00000554811 CALM1P0DP23 149 aa13.31□□□□□ -0.28
XRCC3-208ENST00000554811 CALM2P0DP24 149 aa13.31□□□□□ -0.28
XRCC3-208ENST00000554811 CALM3P0DP25 149 aa13.31□□□□□ -0.28
XRCC3-208ENST00000554811 TROAPQ12815 778 aa13.31□□□□□ -0.28
XRCC3-208ENST00000554811 TCP11X2Q5H9J9 407 aa13.31□□□□□ -0.28
XRCC3-208ENST00000554811 TMTC1Q8IUR5 882 aa13.31□□□□□ -0.28
XRCC3-208ENST00000554811 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.31□□□□□ -0.28
XRCC3-208ENST00000554811 SMARCAL1Q9NZC9 954 aa13.31□□□□□ -0.28
XRCC3-208ENST00000554811 ZNF219Q9P2Y4 722 aaPredicted RBP13.31□□□□□ -0.28
XRCC3-208ENST00000554811 MYO6Q9UM54 1294 aa13.31□□□□□ -0.28
XRCC3-208ENST00000554811 COL5A2P05997 1499 aaPredicted RBP13.3□□□□□ -0.28
XRCC3-208ENST00000554811 TUBB4AP04350 444 aa13.3□□□□□ -0.28
XRCC3-208ENST00000554811 JAKMIP2Q96AA8 810 aa13.3□□□□□ -0.28
XRCC3-208ENST00000554811 CCDC42Q96M95 316 aa13.3□□□□□ -0.28
XRCC3-208ENST00000554811 DUSP10Q9Y6W6 482 aa13.3□□□□□ -0.28
XRCC3-208ENST00000554811 FAM205AQ6ZU69 1335 aa13.3□□□□□ -0.28
XRCC3-208ENST00000554811 C6orf229H3BNL8 230 aa13.3□□□□□ -0.28
XRCC3-208ENST00000554811 H3BQF6 201 aa13.3□□□□□ -0.28
XRCC3-208ENST00000554811 RIMBP2O15034 1052 aa13.3□□□□□ -0.28
XRCC3-208ENST00000554811 PMS1P54277 932 aaKnown RBP13.3□□□□□ -0.28
XRCC3-208ENST00000554811 DNAJC5Q9H3Z4 198 aa13.3□□□□□ -0.28
XRCC3-208ENST00000554811 AGPAT5Q9NUQ2 364 aa13.3□□□□□ -0.28
XRCC3-208ENST00000554811 RMND1Q9NWS8 449 aa13.3□□□□□ -0.28
XRCC3-208ENST00000554811 TTF2Q9UNY4 1162 aaKnown RBP13.3□□□□□ -0.28
XRCC3-208ENST00000554811 ERVV-1B6SEH8 477 aa13.29□□□□□ -0.28
XRCC3-208ENST00000554811 GTPBP6O43824 516 aaPredicted RBP13.29□□□□□ -0.28
XRCC3-208ENST00000554811 BMP15O95972 392 aa13.29□□□□□ -0.28
XRCC3-208ENST00000554811 FCER1AP12319 257 aa13.29□□□□□ -0.28
XRCC3-208ENST00000554811 EPS15P42566 896 aa13.29□□□□□ -0.28
XRCC3-208ENST00000554811 SPAG1Q07617 926 aa13.29□□□□□ -0.28
XRCC3-208ENST00000554811 SEC23AQ15436 765 aa13.29□□□□□ -0.28
XRCC3-208ENST00000554811 HDXQ7Z353 690 aa13.29□□□□□ -0.28
XRCC3-208ENST00000554811 C2CD5Q86YS7 1000 aa13.29□□□□□ -0.28
XRCC3-208ENST00000554811 ADAM21Q9UKJ8 722 aa13.29□□□□□ -0.28
XRCC3-208ENST00000554811 SCN11AQ9UI33 1791 aa13.29□□□□□ -0.28
XRCC3-208ENST00000554811 CABP7Q86V35 215 aa13.29□□□□□ -0.28
XRCC3-208ENST00000554811 FCHSD1Q86WN1 690 aa13.29□□□□□ -0.28
XRCC3-208ENST00000554811 LRRC47Q8N1G4 583 aaKnown RBP13.29□□□□□ -0.28
XRCC3-208ENST00000554811 OR8K1Q8NGG5 319 aa13.29□□□□□ -0.28
XRCC3-208ENST00000554811 CAMTA2O94983 1202 aa13.29□□□□□ -0.28
XRCC3-208ENST00000554811 TBC1D9BQ66K14 1250 aa13.29□□□□□ -0.28
XRCC3-208ENST00000554811 INTS5Q6P9B9 1019 aaKnown RBP13.29□□□□□ -0.28
XRCC3-208ENST00000554811 NELFCDQ8IXH7 590 aa13.29□□□□□ -0.28
XRCC3-208ENST00000554811 SH3RF3Q8TEJ3 882 aaPredicted RBP13.29□□□□□ -0.28
XRCC3-208ENST00000554811 PANX2Q96RD6 677 aa13.29□□□□□ -0.28
XRCC3-208ENST00000554811 RUFY1Q96T51 708 aa13.29□□□□□ -0.28
XRCC3-208ENST00000554811 KLRF2D3W0D1 207 aa13.28□□□□□ -0.28
XRCC3-208ENST00000554811 BUB1O43683 1085 aa13.28□□□□□ -0.28
XRCC3-208ENST00000554811 NDUFA10O95299 355 aa13.28□□□□□ -0.28
XRCC3-208ENST00000554811 CALML3P27482 149 aa13.28□□□□□ -0.28
XRCC3-208ENST00000554811 SLC7A5Q01650 507 aa13.28□□□□□ -0.28
XRCC3-208ENST00000554811 C2orf54Q08AI8 447 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms