RNA–Protein interactions for RNA: ENST00000554805.6

SYNE2-213, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-213ENST00000554805 CCDC178Q5BJE1 867 aa10.68□□□□□ -0.7
SYNE2-213ENST00000554805 NOA1Q8NC60 698 aaKnown RBP10.68□□□□□ -0.7
SYNE2-213ENST00000554805 GDAP1L1Q96MZ0 367 aa10.68□□□□□ -0.7
SYNE2-213ENST00000554805 BRIP1Q9BX63 1249 aa10.68□□□□□ -0.7
SYNE2-213ENST00000554805 ZNF652Q9Y2D9 606 aa10.68□□□□□ -0.7
SYNE2-213ENST00000554805 FAN1Q9Y2M0 1017 aa10.68□□□□□ -0.7
SYNE2-213ENST00000554805 CNTNAP5Q8WYK1 1306 aa10.68□□□□□ -0.7
SYNE2-213ENST00000554805 TTC26A0AVF1 554 aa10.68□□□□□ -0.7
SYNE2-213ENST00000554805 H7C1D1 291 aa10.68□□□□□ -0.7
SYNE2-213ENST00000554805 N4BP1O75113 896 aaKnown RBP10.68□□□□□ -0.7
SYNE2-213ENST00000554805 NDUFA10O95299 355 aa10.68□□□□□ -0.7
SYNE2-213ENST00000554805 ERFEQ4G0M1 354 aa10.68□□□□□ -0.7
SYNE2-213ENST00000554805 BEND6Q5SZJ8 279 aaPredicted RBP10.68□□□□□ -0.7
SYNE2-213ENST00000554805 HDAC6Q9UBN7 1215 aa10.68□□□□□ -0.7
SYNE2-213ENST00000554805 NID2Q14112 1375 aa10.68□□□□□ -0.7
SYNE2-213ENST00000554805 IRX5P78411 483 aaPredicted RBP10.68□□□□□ -0.7
SYNE2-213ENST00000554805 TFAP4Q01664 338 aa10.68□□□□□ -0.7
SYNE2-213ENST00000554805 INF2Q27J81 1249 aa10.68□□□□□ -0.7
SYNE2-213ENST00000554805 INTS5Q6P9B9 1019 aaKnown RBP10.68□□□□□ -0.7
SYNE2-213ENST00000554805 DZIP1Q86YF9 867 aaKnown RBP10.68□□□□□ -0.7
SYNE2-213ENST00000554805 LOC102724428A0A0B4J2F2 783 aa10.67□□□□□ -0.7
SYNE2-213ENST00000554805 CAMTA2O94983 1202 aa10.67□□□□□ -0.7
SYNE2-213ENST00000554805 SIK1P57059 783 aa10.67□□□□□ -0.7
SYNE2-213ENST00000554805 UBE4AQ14139 1066 aa10.67□□□□□ -0.7
SYNE2-213ENST00000554805 CASP8Q14790 479 aa10.67□□□□□ -0.7
SYNE2-213ENST00000554805 PDXDC2PQ6P474 469 aa10.67□□□□□ -0.7
SYNE2-213ENST00000554805 HINFPQ9BQA5 517 aa10.67□□□□□ -0.7
SYNE2-213ENST00000554805 STX8Q9UNK0 236 aa10.67□□□□□ -0.7
SYNE2-213ENST00000554805 ITIH6Q6UXX5 1313 aa10.67□□□□□ -0.7
SYNE2-213ENST00000554805 UTRNP46939 3433 aa10.67□□□□□ -0.7
SYNE2-213ENST00000554805 MYO5AQ9Y4I1 1855 aaKnown RBP10.67□□□□□ -0.7
SYNE2-213ENST00000554805 MYH7P12883 1935 aa10.67□□□□□ -0.7
SYNE2-213ENST00000554805 ADAMTS3O15072 1205 aa10.67□□□□□ -0.7
SYNE2-213ENST00000554805 SRGAP2O75044 1071 aa10.67□□□□□ -0.7
SYNE2-213ENST00000554805 NTSR2O95665 410 aa10.67□□□□□ -0.7
SYNE2-213ENST00000554805 LONP1P36776 959 aaKnown RBP10.67□□□□□ -0.7
SYNE2-213ENST00000554805 TRAPPC10P48553 1259 aa10.67□□□□□ -0.7
SYNE2-213ENST00000554805 MECOMQ03112 1051 aa10.67□□□□□ -0.7
SYNE2-213ENST00000554805 TBC1D8BQ0IIM8 1120 aa10.67□□□□□ -0.7
SYNE2-213ENST00000554805 E2F4Q16254 413 aa10.67□□□□□ -0.7
SYNE2-213ENST00000554805 IL17AQ16552 155 aa10.67□□□□□ -0.7
SYNE2-213ENST00000554805 PFKFB3Q16875 520 aaPredicted RBP10.67□□□□□ -0.7
SYNE2-213ENST00000554805 CSGALNACT2Q8N6G5 542 aa10.67□□□□□ -0.7
SYNE2-213ENST00000554805 EXOC4Q96A65 974 aa10.67□□□□□ -0.7
SYNE2-213ENST00000554805 FAM84BQ96KN1 310 aaPredicted RBP10.67□□□□□ -0.7
SYNE2-213ENST00000554805 MTRQ99707 1265 aa10.67□□□□□ -0.7
SYNE2-213ENST00000554805 MACROD2A1Z1Q3 448 aa10.67□□□□□ -0.7
SYNE2-213ENST00000554805 B4DLN1 442 aa10.67□□□□□ -0.7
SYNE2-213ENST00000554805 BCL9O00512 1426 aa10.67□□□□□ -0.7
SYNE2-213ENST00000554805 ZMYND10O75800 440 aa10.67□□□□□ -0.7
SYNE2-213ENST00000554805 ARHGAP25P42331 645 aa10.67□□□□□ -0.7
SYNE2-213ENST00000554805 TUBB4BP68371 445 aa10.67□□□□□ -0.7
SYNE2-213ENST00000554805 ASIC1P78348 528 aa10.67□□□□□ -0.7
SYNE2-213ENST00000554805 MB21D1Q8N884 522 aa10.67□□□□□ -0.7
SYNE2-213ENST00000554805 DRC1Q96MC2 740 aa10.67□□□□□ -0.7
SYNE2-213ENST00000554805 VAT1LQ9HCJ6 419 aa10.67□□□□□ -0.7
SYNE2-213ENST00000554805 DCP1AQ9NPI6 582 aaPredicted RBP10.67□□□□□ -0.7
SYNE2-213ENST00000554805 JADE2Q9NQC1 790 aa10.67□□□□□ -0.7
SYNE2-213ENST00000554805 USP17L8P0C7I0 530 aa10.66□□□□□ -0.7
SYNE2-213ENST00000554805 PRDX5P30044 214 aa10.66□□□□□ -0.7
SYNE2-213ENST00000554805 CYLC1P35663 651 aaPredicted RBP10.66□□□□□ -0.7
SYNE2-213ENST00000554805 NPY5RQ15761 445 aa10.66□□□□□ -0.7
SYNE2-213ENST00000554805 TNFRSF25Q93038 417 aa10.66□□□□□ -0.7
SYNE2-213ENST00000554805 JAKMIP2Q96AA8 810 aa10.66□□□□□ -0.7
SYNE2-213ENST00000554805 MINPP1Q9UNW1 487 aa10.66□□□□□ -0.7
SYNE2-213ENST00000554805 KLRK1P26718 216 aa10.66□□□□□ -0.7
SYNE2-213ENST00000554805 HIBADHP31937 336 aaKnown RBP10.66□□□□□ -0.7
SYNE2-213ENST00000554805 KRT83P78385 493 aa10.66□□□□□ -0.7
SYNE2-213ENST00000554805 RAD51AP2Q09MP3 1159 aa10.66□□□□□ -0.7
SYNE2-213ENST00000554805 C3orf67Q6ZVT6 689 aa10.66□□□□□ -0.7
SYNE2-213ENST00000554805 AMOTL1Q8IY63 956 aa10.66□□□□□ -0.7
SYNE2-213ENST00000554805 PNMA1Q8ND90 353 aa10.66□□□□□ -0.7
SYNE2-213ENST00000554805 BBXQ8WY36 941 aaPredicted RBP10.66□□□□□ -0.7
SYNE2-213ENST00000554805 CELF1Q92879 486 aaKnown RBP10.66□□□□□ -0.7
SYNE2-213ENST00000554805 DYNLL2Q96FJ2 89 aa10.66□□□□□ -0.7
SYNE2-213ENST00000554805 HAUS4Q9H6D7 363 aa10.66□□□□□ -0.7
SYNE2-213ENST00000554805 DISC1Q9NRI5 854 aa10.66□□□□□ -0.7
SYNE2-213ENST00000554805 TCP11L1Q9NUJ3 509 aa10.66□□□□□ -0.7
SYNE2-213ENST00000554805 EXOC1Q9NV70 894 aa10.66□□□□□ -0.7
SYNE2-213ENST00000554805 MYO1AQ9UBC5 1043 aa10.66□□□□□ -0.7
SYNE2-213ENST00000554805 SAR1BQ9Y6B6 198 aa10.66□□□□□ -0.7
SYNE2-213ENST00000554805 KRT86O43790 486 aa10.66□□□□□ -0.7
SYNE2-213ENST00000554805 PDE4DQ08499 809 aa10.66□□□□□ -0.7
SYNE2-213ENST00000554805 C10orf67Q8IYJ2 551 aa10.66□□□□□ -0.7
SYNE2-213ENST00000554805 ZNF444Q8N0Y2 327 aaPredicted RBP10.66□□□□□ -0.7
SYNE2-213ENST00000554805 STAG2Q8N3U4 1231 aa10.66□□□□□ -0.7
SYNE2-213ENST00000554805 MSANTD4Q8NCY6 345 aa10.66□□□□□ -0.7
SYNE2-213ENST00000554805 L1RE1Q9UN81 338 aa10.66□□□□□ -0.7
SYNE2-213ENST00000554805 MAP2K7O14733 419 aa10.65□□□□□ -0.7
SYNE2-213ENST00000554805 GOLGA8HP0CJ92 632 aa10.65□□□□□ -0.7
SYNE2-213ENST00000554805 LETM2Q2VYF4 491 aa10.65□□□□□ -0.7
SYNE2-213ENST00000554805 UBXN6Q9BZV1 441 aa10.65□□□□□ -0.7
SYNE2-213ENST00000554805 TMEM60Q9H2L4 133 aa10.65□□□□□ -0.7
SYNE2-213ENST00000554805 DEF6Q9H4E7 631 aa10.65□□□□□ -0.7
SYNE2-213ENST00000554805 PCDHA4Q9UN74 947 aa10.65□□□□□ -0.7
SYNE2-213ENST00000554805 FAM205AQ6ZU69 1335 aa10.65□□□□□ -0.7
SYNE2-213ENST00000554805 LGALS16A8MUM7 142 aa10.65□□□□□ -0.7
SYNE2-213ENST00000554805 ATP1A1P05023 1023 aaKnown RBP10.65□□□□□ -0.7
SYNE2-213ENST00000554805 TSPY3P0CV98 308 aa10.65□□□□□ -0.7
SYNE2-213ENST00000554805 TSPY8P0CW00 308 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms