RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 KRTAP4-8Q9BYQ9 185 aa6.32□□□□□ -1.4
ATXN3-229ENST00000554672 CACNA1SQ13698 1873 aa6.32□□□□□ -1.4
ATXN3-229ENST00000554672 RTL9Q8NET4 1388 aa6.31□□□□□ -1.4
ATXN3-229ENST00000554672 PITPNM2Q9BZ72 1349 aa6.31□□□□□ -1.4
ATXN3-229ENST00000554672 COL3A1P02461 1466 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-229ENST00000554672 H2AFB1P0C5Y9 115 aa6.31□□□□□ -1.4
ATXN3-229ENST00000554672 H2AFB2P0C5Z0 115 aa6.31□□□□□ -1.4
ATXN3-229ENST00000554672 HOXD8P13378 290 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-229ENST00000554672 EIF2AK2P19525 551 aaKnown RBP6.31□□□□□ -1.4
ATXN3-229ENST00000554672 EIF2S2P20042 333 aaKnown RBP6.31□□□□□ -1.4
ATXN3-229ENST00000554672 BRD2P25440 801 aaKnown RBP6.31□□□□□ -1.4
ATXN3-229ENST00000554672 RPS8P62241 208 aaKnown RBP6.31□□□□□ -1.4
ATXN3-229ENST00000554672 NAA30Q147X3 362 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-229ENST00000554672 MOB2Q70IA6 237 aa6.31□□□□□ -1.4
ATXN3-229ENST00000554672 COPS6Q7L5N1 327 aa6.31□□□□□ -1.4
ATXN3-229ENST00000554672 WFDC8Q8IUA0 241 aa6.31□□□□□ -1.4
ATXN3-229ENST00000554672 WFDC12Q8WWY7 111 aa6.31□□□□□ -1.4
ATXN3-229ENST00000554672 CELF1Q92879 486 aaKnown RBP6.31□□□□□ -1.4
ATXN3-229ENST00000554672 PLD4Q96BZ4 506 aa6.31□□□□□ -1.4
ATXN3-229ENST00000554672 MKNK1Q9BUB5 465 aa6.31□□□□□ -1.4
ATXN3-229ENST00000554672 TRPM7Q96QT4 1865 aa6.3□□□□□ -1.4
ATXN3-229ENST00000554672 DLL1O00548 723 aa6.3□□□□□ -1.4
ATXN3-229ENST00000554672 ZBTB39O15060 712 aa6.3□□□□□ -1.4
ATXN3-229ENST00000554672 NOS3P29474 1203 aa6.3□□□□□ -1.4
ATXN3-229ENST00000554672 NF2P35240 595 aa6.3□□□□□ -1.4
ATXN3-229ENST00000554672 TRIM26Q12899 539 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-229ENST00000554672 AIMP1Q12904 312 aaKnown RBP6.3□□□□□ -1.4
ATXN3-229ENST00000554672 ARMC9Q7Z3E5 817 aa6.3□□□□□ -1.4
ATXN3-229ENST00000554672 NSUN5Q96P11 429 aaKnown RBP6.3□□□□□ -1.4
ATXN3-229ENST00000554672 GMLQ99445 158 aa6.3□□□□□ -1.4
ATXN3-229ENST00000554672 R3HDMLQ9H3Y0 253 aa6.3□□□□□ -1.4
ATXN3-229ENST00000554672 MYOZ2Q9NPC6 264 aa6.3□□□□□ -1.4
ATXN3-229ENST00000554672 PODXL2Q9NZ53 605 aa6.3□□□□□ -1.4
ATXN3-229ENST00000554672 TRIM17Q9Y577 477 aa6.3□□□□□ -1.4
ATXN3-229ENST00000554672 BCORQ6W2J9 1755 aa6.3□□□□□ -1.4
ATXN3-229ENST00000554672 PSAPP07602 524 aa6.29□□□□□ -1.4
ATXN3-229ENST00000554672 HSP90B1P14625 803 aaKnown RBP6.29□□□□□ -1.4
ATXN3-229ENST00000554672 EN2P19622 333 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-229ENST00000554672 SOX18P35713 384 aa6.29□□□□□ -1.4
ATXN3-229ENST00000554672 IREB2P48200 963 aaKnown RBP6.29□□□□□ -1.4
ATXN3-229ENST00000554672 MMP14P50281 582 aa6.29□□□□□ -1.4
ATXN3-229ENST00000554672 PTPN12Q05209 780 aaKnown RBP6.29□□□□□ -1.4
ATXN3-229ENST00000554672 PROSER3Q2NL68 480 aa6.29□□□□□ -1.4
ATXN3-229ENST00000554672 LDLRAD1Q5T700 205 aa6.29□□□□□ -1.4
ATXN3-229ENST00000554672 PRAMEF18Q5VWM3 479 aa6.29□□□□□ -1.4
ATXN3-229ENST00000554672 IGF2-ASQ6U949 168 aa6.29□□□□□ -1.4
ATXN3-229ENST00000554672 OTOP1Q7RTM1 612 aa6.29□□□□□ -1.4
ATXN3-229ENST00000554672 XAGE3Q8WTP9 111 aa6.29□□□□□ -1.4
ATXN3-229ENST00000554672 CLP1Q92989 425 aaKnown RBP6.29□□□□□ -1.4
ATXN3-229ENST00000554672 TP53INP1Q96A56 240 aa6.29□□□□□ -1.4
ATXN3-229ENST00000554672 ARMC5Q96C12 935 aa6.29□□□□□ -1.4
ATXN3-229ENST00000554672 FAM89AQ96GI7 184 aa6.29□□□□□ -1.4
ATXN3-229ENST00000554672 PCGF6Q9BYE7 350 aa6.29□□□□□ -1.4
ATXN3-229ENST00000554672 ZMYND15Q9H091 742 aa6.29□□□□□ -1.4
ATXN3-229ENST00000554672 PNNQ9H307 717 aaKnown RBP6.29□□□□□ -1.4
ATXN3-229ENST00000554672 BABAM1Q9NWV8 329 aa6.29□□□□□ -1.4
ATXN3-229ENST00000554672 PTPN22Q9Y2R2 807 aa6.29□□□□□ -1.4
ATXN3-229ENST00000554672 TNRC18O15417 2968 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-229ENST00000554672 MANSC4A6NHS7 340 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-229ENST00000554672 UFL1O94874 794 aa6.28□□□□□ -1.4
ATXN3-229ENST00000554672 ANXA1P04083 346 aa6.28□□□□□ -1.4
ATXN3-229ENST00000554672 ARID4AP29374 1257 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-229ENST00000554672 PPP2R1AP30153 589 aa6.28□□□□□ -1.4
ATXN3-229ENST00000554672 NFE2L2Q16236 605 aa6.28□□□□□ -1.4
ATXN3-229ENST00000554672 NBPF9Q3BBW0 867 aa6.28□□□□□ -1.4
ATXN3-229ENST00000554672 GDF6Q6KF10 455 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-229ENST00000554672 ADAMTSL4Q6UY14 1074 aa6.28□□□□□ -1.4
ATXN3-229ENST00000554672 ERO1AQ96HE7 468 aa6.28□□□□□ -1.4
ATXN3-229ENST00000554672 MEGF10Q96KG7 1140 aa6.28□□□□□ -1.4
ATXN3-229ENST00000554672 ISCA1Q9BUE6 129 aa6.28□□□□□ -1.4
ATXN3-229ENST00000554672 TSPYL4Q9UJ04 414 aa6.28□□□□□ -1.4
ATXN3-229ENST00000554672 UNCXA6NJT0 531 aa6.27□□□□□ -1.41
ATXN3-229ENST00000554672 WNT10BO00744 389 aa6.27□□□□□ -1.41
ATXN3-229ENST00000554672 IRS4O14654 1257 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-229ENST00000554672 ATP2B4P23634 1241 aa6.27□□□□□ -1.41
ATXN3-229ENST00000554672 ZAP70P43403 619 aa6.27□□□□□ -1.41
ATXN3-229ENST00000554672 SETDB1Q15047 1291 aa6.27□□□□□ -1.41
ATXN3-229ENST00000554672 ARHGEF6Q15052 776 aa6.27□□□□□ -1.41
ATXN3-229ENST00000554672 OTUD7BQ6GQQ9 843 aa6.27□□□□□ -1.41
ATXN3-229ENST00000554672 NBPF11Q86T75 865 aa6.27□□□□□ -1.41
ATXN3-229ENST00000554672 IL22RA1Q8N6P7 574 aa6.27□□□□□ -1.41
ATXN3-229ENST00000554672 OR13H1Q8NG92 308 aa6.27□□□□□ -1.41
ATXN3-229ENST00000554672 PLBD2Q8NHP8 589 aa6.27□□□□□ -1.41
ATXN3-229ENST00000554672 PLEKHF1Q96S99 279 aa6.27□□□□□ -1.41
ATXN3-229ENST00000554672 SCAF8Q9UPN6 1271 aaKnown RBP6.27□□□□□ -1.41
ATXN3-229ENST00000554672 TRIM33Q9UPN9 1127 aa6.27□□□□□ -1.41
ATXN3-229ENST00000554672 SIPA1L3O60292 1781 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-229ENST00000554672 ZNF609O15014 1411 aa6.26□□□□□ -1.41
ATXN3-229ENST00000554672 H0YGN5 161 aa6.26□□□□□ -1.41
ATXN3-229ENST00000554672 ALX3O95076 343 aa6.26□□□□□ -1.41
ATXN3-229ENST00000554672 GHRHP01286 108 aa6.26□□□□□ -1.41
ATXN3-229ENST00000554672 ZBTB48P10074 688 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-229ENST00000554672 SP3Q02447 781 aa6.26□□□□□ -1.41
ATXN3-229ENST00000554672 PRKG1Q13976 671 aa6.26□□□□□ -1.41
ATXN3-229ENST00000554672 APOBEC3FQ8IUX4 373 aaKnown RBP6.26□□□□□ -1.41
ATXN3-229ENST00000554672 SLC17A8Q8NDX2 589 aa6.26□□□□□ -1.41
ATXN3-229ENST00000554672 GPR152Q8TDT2 470 aa6.26□□□□□ -1.41
ATXN3-229ENST00000554672 PIK3R5Q8WYR1 880 aa6.26□□□□□ -1.41
ATXN3-229ENST00000554672 PBXIP1Q96AQ6 731 aa6.26□□□□□ -1.41
ATXN3-229ENST00000554672 ZNF428Q96B54 188 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 517.8 ms