RNA–Protein interactions for RNA: ENST00000554627.5

MARK3-208, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 1,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-208ENST00000554627 FDX1P10109 184 aa11.16□□□□□ -0.62
MARK3-208ENST00000554627 CETPP11597 493 aa11.16□□□□□ -0.62
MARK3-208ENST00000554627 XBP1P17861 261 aa11.16□□□□□ -0.62
MARK3-208ENST00000554627 GJB2P29033 226 aa11.16□□□□□ -0.62
MARK3-208ENST00000554627 ZNF157P51786 506 aaPredicted RBP11.16□□□□□ -0.62
MARK3-208ENST00000554627 TRAF1Q13077 416 aa11.16□□□□□ -0.62
MARK3-208ENST00000554627 SYDE2Q5VT97 1194 aa11.16□□□□□ -0.62
MARK3-208ENST00000554627 RGMBQ6NW40 437 aa11.16□□□□□ -0.62
MARK3-208ENST00000554627 GADL1Q6ZQY3 521 aa11.16□□□□□ -0.62
MARK3-208ENST00000554627 RASGRP2Q7LDG7 609 aa11.16□□□□□ -0.62
MARK3-208ENST00000554627 SRBD1Q8N5C6 995 aaKnown RBP11.16□□□□□ -0.62
MARK3-208ENST00000554627 ZNF713Q8N859 430 aaPredicted RBP11.16□□□□□ -0.62
MARK3-208ENST00000554627 RGS22Q8NE09 1264 aa11.16□□□□□ -0.62
MARK3-208ENST00000554627 CCDC102AQ96A19 550 aa11.16□□□□□ -0.62
MARK3-208ENST00000554627 RPAP3Q9H6T3 665 aaPredicted RBP11.16□□□□□ -0.62
MARK3-208ENST00000554627 RIOX1Q9H6W3 641 aa11.16□□□□□ -0.62
MARK3-208ENST00000554627 EMILIN3Q9NT22 766 aa11.16□□□□□ -0.62
MARK3-208ENST00000554627 ORC3Q9UBD5 711 aaPredicted RBP11.16□□□□□ -0.62
MARK3-208ENST00000554627 PNMA2Q9UL42 364 aa11.16□□□□□ -0.62
MARK3-208ENST00000554627 MYPNQ86TC9 1320 aa11.16□□□□□ -0.62
MARK3-208ENST00000554627 ZNFX1Q9P2E3 1918 aaKnown RBP11.16□□□□□ -0.62
MARK3-208ENST00000554627 USP17L15C9J2P7 530 aa11.16□□□□□ -0.62
MARK3-208ENST00000554627 USP17L13C9JLJ4 530 aa11.16□□□□□ -0.62
MARK3-208ENST00000554627 USP17L11C9JVI0 530 aa11.16□□□□□ -0.62
MARK3-208ENST00000554627 USP17L18D6R9N7 530 aa11.16□□□□□ -0.62
MARK3-208ENST00000554627 USP17L22D6RA61 530 aa11.16□□□□□ -0.62
MARK3-208ENST00000554627 USP17L17D6RBQ6 530 aa11.16□□□□□ -0.62
MARK3-208ENST00000554627 USP17L19D6RCP7 530 aa11.16□□□□□ -0.62
MARK3-208ENST00000554627 USP17L20D6RJB6 530 aa11.16□□□□□ -0.62
MARK3-208ENST00000554627 DSG3P32926 999 aa11.16□□□□□ -0.62
MARK3-208ENST00000554627 USP17L24Q0WX57 530 aa11.16□□□□□ -0.62
MARK3-208ENST00000554627 FUT2Q10981 343 aa11.16□□□□□ -0.62
MARK3-208ENST00000554627 TRIM29Q14134 588 aa11.16□□□□□ -0.62
MARK3-208ENST00000554627 SPRYD7Q5W111 196 aa11.16□□□□□ -0.62
MARK3-208ENST00000554627 NBPF11Q86T75 865 aa11.16□□□□□ -0.62
MARK3-208ENST00000554627 RASAL3Q86YV0 1011 aa11.16□□□□□ -0.62
MARK3-208ENST00000554627 FAM177A1Q8N128 213 aaPredicted RBP11.16□□□□□ -0.62
MARK3-208ENST00000554627 CCDC82Q8N4S0 544 aa11.16□□□□□ -0.62
MARK3-208ENST00000554627 SPRYD3Q8NCJ5 442 aa11.16□□□□□ -0.62
MARK3-208ENST00000554627 PHKBQ93100 1093 aa11.16□□□□□ -0.62
MARK3-208ENST00000554627 NUP88Q99567 741 aaPredicted RBP11.16□□□□□ -0.62
MARK3-208ENST00000554627 SLF1Q9BQI6 1058 aa11.16□□□□□ -0.62
MARK3-208ENST00000554627 CREBZFQ9NS37 354 aa11.16□□□□□ -0.62
MARK3-208ENST00000554627 FOXD4L1Q9NU39 408 aa11.16□□□□□ -0.62
MARK3-208ENST00000554627 JAK2O60674 1132 aa11.15□□□□□ -0.62
MARK3-208ENST00000554627 FLOT1O75955 427 aa11.15□□□□□ -0.62
MARK3-208ENST00000554627 SLC4A3P48751 1232 aa11.15□□□□□ -0.62
MARK3-208ENST00000554627 APLP1P51693 650 aa11.15□□□□□ -0.62
MARK3-208ENST00000554627 KIAA1755Q5JYT7 1200 aa11.15□□□□□ -0.62
MARK3-208ENST00000554627 ADGRF4Q8IZF3 695 aa11.15□□□□□ -0.62
MARK3-208ENST00000554627 CMTR1Q8N1G2 835 aaKnown RBP11.15□□□□□ -0.62
MARK3-208ENST00000554627 PRPF38AQ8NAV1 312 aaKnown RBP11.15□□□□□ -0.62
MARK3-208ENST00000554627 CCDC12Q8WUD4 166 aaPredicted RBP11.15□□□□□ -0.62
MARK3-208ENST00000554627 DDX11Q96FC9 970 aa11.15□□□□□ -0.62
MARK3-208ENST00000554627 PNMA3Q9UL41 463 aa11.15□□□□□ -0.62
MARK3-208ENST00000554627 AGTPBP1Q9UPW5 1226 aa11.15□□□□□ -0.62
MARK3-208ENST00000554627 SLC45A1Q9Y2W3 748 aa11.15□□□□□ -0.62
MARK3-208ENST00000554627 CTDP1Q9Y5B0 961 aaPredicted RBP11.15□□□□□ -0.62
MARK3-208ENST00000554627 MGAMO43451 1857 aa11.14□□□□□ -0.63
MARK3-208ENST00000554627 PNMA6FA0A0J9YX94 578 aa11.14□□□□□ -0.63
MARK3-208ENST00000554627 MANSC4A6NHS7 340 aaPredicted RBP11.14□□□□□ -0.63
MARK3-208ENST00000554627 ZBTB5O15062 677 aa11.14□□□□□ -0.63
MARK3-208ENST00000554627 SLC10A3P09131 477 aa11.14□□□□□ -0.63
MARK3-208ENST00000554627 SCG2P13521 617 aa11.14□□□□□ -0.63
MARK3-208ENST00000554627 OSBPP22059 807 aa11.14□□□□□ -0.63
MARK3-208ENST00000554627 HOXA7P31268 230 aaPredicted RBP11.14□□□□□ -0.63
MARK3-208ENST00000554627 SLC16A2P36021 539 aa11.14□□□□□ -0.63
MARK3-208ENST00000554627 CDC37Q16543 378 aaPredicted RBP11.14□□□□□ -0.63
MARK3-208ENST00000554627 PFKFB3Q16875 520 aaPredicted RBP11.14□□□□□ -0.63
MARK3-208ENST00000554627 LARP1BQ659C4 914 aaKnown RBP11.14□□□□□ -0.63
MARK3-208ENST00000554627 TTBK2Q6IQ55 1244 aa11.14□□□□□ -0.63
MARK3-208ENST00000554627 CCDC148Q8NFR7 591 aa11.14□□□□□ -0.63
MARK3-208ENST00000554627 KIFC2Q96AC6 838 aa11.14□□□□□ -0.63
MARK3-208ENST00000554627 ALG1Q9BT22 464 aa11.14□□□□□ -0.63
MARK3-208ENST00000554627 UBA5Q9GZZ9 404 aa11.14□□□□□ -0.63
MARK3-208ENST00000554627 HOXC10Q9NYD6 342 aa11.14□□□□□ -0.63
MARK3-208ENST00000554627 PPP1R9AQ9ULJ8 1098 aa11.14□□□□□ -0.63
MARK3-208ENST00000554627 PRR12Q9ULL5 1215 aa11.14□□□□□ -0.63
MARK3-208ENST00000554627 CIZ1Q9ULV3 898 aaPredicted RBP11.14□□□□□ -0.63
MARK3-208ENST00000554627 V9GY48 417 aaPredicted RBP11.14□□□□□ -0.63
MARK3-208ENST00000554627 MYH7BA7E2Y1 1941 aa11.14□□□□□ -0.63
MARK3-208ENST00000554627 PLXNB2O15031 1838 aa11.14□□□□□ -0.63
MARK3-208ENST00000554627 THSD7BQ9C0I4 1608 aa11.13□□□□□ -0.63
MARK3-208ENST00000554627 CCL15-CCL14A0A0B4J2E2 113 aa11.13□□□□□ -0.63
MARK3-208ENST00000554627 H3BQV1 296 aa11.13□□□□□ -0.63
MARK3-208ENST00000554627 CYTH3O43739 400 aa11.13□□□□□ -0.63
MARK3-208ENST00000554627 CAPN15O75808 1086 aa11.13□□□□□ -0.63
MARK3-208ENST00000554627 GJA5P36382 358 aa11.13□□□□□ -0.63
MARK3-208ENST00000554627 INHBEP58166 350 aa11.13□□□□□ -0.63
MARK3-208ENST00000554627 IRX3P78415 501 aaPredicted RBP11.13□□□□□ -0.63
MARK3-208ENST00000554627 SREBF2Q12772 1141 aa11.13□□□□□ -0.63
MARK3-208ENST00000554627 COG2Q14746 738 aa11.13□□□□□ -0.63
MARK3-208ENST00000554627 CCL15Q16663 113 aa11.13□□□□□ -0.63
MARK3-208ENST00000554627 IFFO2Q5TF58 517 aa11.13□□□□□ -0.63
MARK3-208ENST00000554627 PPP1R18Q6NYC8 613 aa11.13□□□□□ -0.63
MARK3-208ENST00000554627 CATSPERGQ6ZRH7 1159 aa11.13□□□□□ -0.63
MARK3-208ENST00000554627 HOMER1Q86YM7 354 aa11.13□□□□□ -0.63
MARK3-208ENST00000554627 GTF3C2Q8WUA4 911 aaPredicted RBP11.13□□□□□ -0.63
MARK3-208ENST00000554627 MTMR8Q96EF0 704 aa11.13□□□□□ -0.63
MARK3-208ENST00000554627 C8orf76Q96K31 380 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms