RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 MTHFSP49914 203 aa6.65□□□□□ -1.34
ATXN3-228ENST00000554592 DAB2P98082 770 aa6.65□□□□□ -1.34
ATXN3-228ENST00000554592 AMOTQ4VCS5 1084 aa6.65□□□□□ -1.34
ATXN3-228ENST00000554592 EXOSC6Q5RKV6 272 aaKnown RBP6.65□□□□□ -1.34
ATXN3-228ENST00000554592 TMC4Q7Z404 712 aa6.65□□□□□ -1.34
ATXN3-228ENST00000554592 FBF1Q8TES7 1133 aa6.65□□□□□ -1.34
ATXN3-228ENST00000554592 UTP4Q969X6 686 aaKnown RBP6.65□□□□□ -1.34
ATXN3-228ENST00000554592 USP26Q9BXU7 913 aa6.65□□□□□ -1.34
ATXN3-228ENST00000554592 IGSF5Q9NSI5 407 aa6.65□□□□□ -1.34
ATXN3-228ENST00000554592 DHX15O43143 795 aaKnown RBP6.64□□□□□ -1.35
ATXN3-228ENST00000554592 SERPINB2P05120 415 aa6.64□□□□□ -1.35
ATXN3-228ENST00000554592 RPS26P11Q5JNZ5 115 aaPredicted RBP6.64□□□□□ -1.35
ATXN3-228ENST00000554592 INTS5Q6P9B9 1019 aaKnown RBP6.64□□□□□ -1.35
ATXN3-228ENST00000554592 SLC51AQ86UW1 340 aa6.64□□□□□ -1.35
ATXN3-228ENST00000554592 C2CD5Q86YS7 1000 aa6.64□□□□□ -1.35
ATXN3-228ENST00000554592 FAM20CQ8IXL6 584 aa6.64□□□□□ -1.35
ATXN3-228ENST00000554592 BCO2Q9BYV7 579 aa6.64□□□□□ -1.35
ATXN3-228ENST00000554592 POLKQ9UBT6 870 aa6.64□□□□□ -1.35
ATXN3-228ENST00000554592 KDM6AO15550 1401 aaPredicted RBP6.64□□□□□ -1.35
ATXN3-228ENST00000554592 NCAPD2Q15021 1401 aa6.64□□□□□ -1.35
ATXN3-228ENST00000554592 EIF4EBP3O60516 100 aaPredicted RBP6.63□□□□□ -1.35
ATXN3-228ENST00000554592 RECKO95980 971 aa6.63□□□□□ -1.35
ATXN3-228ENST00000554592 MAOBP27338 520 aa6.63□□□□□ -1.35
ATXN3-228ENST00000554592 GNA15P30679 374 aa6.63□□□□□ -1.35
ATXN3-228ENST00000554592 LBX1P52954 281 aa6.63□□□□□ -1.35
ATXN3-228ENST00000554592 PSMD2Q13200 908 aa6.63□□□□□ -1.35
ATXN3-228ENST00000554592 EIF4A2Q14240 407 aaKnown RBP6.63□□□□□ -1.35
ATXN3-228ENST00000554592 NFIXQ14938 502 aa6.63□□□□□ -1.35
ATXN3-228ENST00000554592 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.63□□□□□ -1.35
ATXN3-228ENST00000554592 LDLRAD1Q5T700 205 aa6.63□□□□□ -1.35
ATXN3-228ENST00000554592 ABHD8Q96I13 439 aa6.63□□□□□ -1.35
ATXN3-228ENST00000554592 C7orf69Q9H7B7 122 aa6.63□□□□□ -1.35
ATXN3-228ENST00000554592 STOML1Q9UBI4 398 aa6.63□□□□□ -1.35
ATXN3-228ENST00000554592 NARFQ9UHQ1 456 aa6.63□□□□□ -1.35
ATXN3-228ENST00000554592 TOGARAM1Q9Y4F4 1720 aa6.63□□□□□ -1.35
ATXN3-228ENST00000554592 UBR3Q6ZT12 1888 aa6.62□□□□□ -1.35
ATXN3-228ENST00000554592 CNTNAP1P78357 1384 aa6.62□□□□□ -1.35
ATXN3-228ENST00000554592 SCO2A0A1W2PP80 73 aa6.62□□□□□ -1.35
ATXN3-228ENST00000554592 HMX2A2RU54 273 aa6.62□□□□□ -1.35
ATXN3-228ENST00000554592 IQCA1LA6NCM1 817 aa6.62□□□□□ -1.35
ATXN3-228ENST00000554592 IGLV1-40P01703 118 aa6.62□□□□□ -1.35
ATXN3-228ENST00000554592 BMP3P12645 472 aa6.62□□□□□ -1.35
ATXN3-228ENST00000554592 DRD2P14416 443 aa6.62□□□□□ -1.35
ATXN3-228ENST00000554592 POU4F3Q15319 338 aa6.62□□□□□ -1.35
ATXN3-228ENST00000554592 FDX2Q6P4F2 183 aa6.62□□□□□ -1.35
ATXN3-228ENST00000554592 ZNF530Q6P9A1 599 aaPredicted RBP6.62□□□□□ -1.35
ATXN3-228ENST00000554592 LDHDQ86WU2 507 aa6.62□□□□□ -1.35
ATXN3-228ENST00000554592 CLEC10AQ8IUN9 316 aa6.62□□□□□ -1.35
ATXN3-228ENST00000554592 TRIM42Q8IWZ5 723 aa6.62□□□□□ -1.35
ATXN3-228ENST00000554592 FAM83CQ9BQN1 747 aa6.62□□□□□ -1.35
ATXN3-228ENST00000554592 BACH2Q9BYV9 841 aa6.62□□□□□ -1.35
ATXN3-228ENST00000554592 RNF112Q9ULX5 631 aa6.62□□□□□ -1.35
ATXN3-228ENST00000554592 SOS1Q07889 1333 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-228ENST00000554592 PASKQ96RG2 1323 aa6.61□□□□□ -1.35
ATXN3-228ENST00000554592 SORBS3O60504 671 aa6.61□□□□□ -1.35
ATXN3-228ENST00000554592 DDNO94850 711 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-228ENST00000554592 CYP11A1P05108 521 aa6.61□□□□□ -1.35
ATXN3-228ENST00000554592 PDE6BP35913 854 aa6.61□□□□□ -1.35
ATXN3-228ENST00000554592 RGS19P49795 217 aa6.61□□□□□ -1.35
ATXN3-228ENST00000554592 FCGRTP55899 365 aa6.61□□□□□ -1.35
ATXN3-228ENST00000554592 MAP2K1Q02750 393 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-228ENST00000554592 TSNAXIP1Q2TAA8 658 aa6.61□□□□□ -1.35
ATXN3-228ENST00000554592 DEFB115Q30KQ5 88 aa6.61□□□□□ -1.35
ATXN3-228ENST00000554592 C1orf141Q5JVX7 400 aa6.61□□□□□ -1.35
ATXN3-228ENST00000554592 ARTNQ5T4W7 220 aa6.61□□□□□ -1.35
ATXN3-228ENST00000554592 NXPE4Q6UWF7 544 aa6.61□□□□□ -1.35
ATXN3-228ENST00000554592 DNAJC10Q8IXB1 793 aa6.61□□□□□ -1.35
ATXN3-228ENST00000554592 C2CD4AQ8NCU7 369 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-228ENST00000554592 C3orf58Q8NDZ4 430 aa6.61□□□□□ -1.35
ATXN3-228ENST00000554592 ZNF622Q969S3 477 aaKnown RBP eCLIP6.61□□□□□ -1.35
ATXN3-228ENST00000554592 BRIP1Q9BX63 1249 aa6.61□□□□□ -1.35
ATXN3-228ENST00000554592 OSBPL7Q9BZF2 842 aa6.61□□□□□ -1.35
ATXN3-228ENST00000554592 BCL11AQ9H165 835 aa6.61□□□□□ -1.35
ATXN3-228ENST00000554592 CYP4F12Q9HCS2 524 aa6.61□□□□□ -1.35
ATXN3-228ENST00000554592 MRS2Q9HD23 443 aa6.61□□□□□ -1.35
ATXN3-228ENST00000554592 HIF3AQ9Y2N7 669 aa6.61□□□□□ -1.35
ATXN3-228ENST00000554592 AK5Q9Y6K8 562 aa6.61□□□□□ -1.35
ATXN3-228ENST00000554592 MAP2P11137 1827 aaKnown RBP6.61□□□□□ -1.35
ATXN3-228ENST00000554592 TAF1LQ8IZX4 1826 aa6.61□□□□□ -1.35
ATXN3-228ENST00000554592 C4AP0C0L4 1744 aa6.61□□□□□ -1.35
ATXN3-228ENST00000554592 KIF13BQ9NQT8 1826 aa6.6□□□□□ -1.35
ATXN3-228ENST00000554592 A0A087WZG4 1122 aa6.6□□□□□ -1.35
ATXN3-228ENST00000554592 RASSF10A6NK89 507 aa6.6□□□□□ -1.35
ATXN3-228ENST00000554592 CCDC85CA6NKD9 419 aa6.6□□□□□ -1.35
ATXN3-228ENST00000554592 SART1O43290 800 aaKnown RBP6.6□□□□□ -1.35
ATXN3-228ENST00000554592 HSPA8P11142 646 aaKnown RBP6.6□□□□□ -1.35
ATXN3-228ENST00000554592 CYP19A1P11511 503 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-228ENST00000554592 SOX4Q06945 474 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-228ENST00000554592 NFIAQ12857 509 aa6.6□□□□□ -1.35
ATXN3-228ENST00000554592 SGO2Q562F6 1265 aa6.6□□□□□ -1.35
ATXN3-228ENST00000554592 SOGA3Q5TF21 947 aa6.6□□□□□ -1.35
ATXN3-228ENST00000554592 BEND4Q6ZU67 534 aa6.6□□□□□ -1.35
ATXN3-228ENST00000554592 C12orf50Q8NA57 414 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-228ENST00000554592 FRMD6Q96NE9 622 aa6.6□□□□□ -1.35
ATXN3-228ENST00000554592 TAOK3Q9H2K8 898 aa6.6□□□□□ -1.35
ATXN3-228ENST00000554592 TAF1DQ9H5J8 278 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-228ENST00000554592 VTI1BQ9UEU0 232 aa6.6□□□□□ -1.35
ATXN3-228ENST00000554592 N4BP2Q86UW6 1770 aaPredicted RBP6.59□□□□□ -1.35
ATXN3-228ENST00000554592 KIAA1551Q9HCM1 1747 aa6.59□□□□□ -1.35
ATXN3-228ENST00000554592 LTBP3Q9NS15 1303 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms