RNA–Protein interactions for RNA: ENST00000554556.5

GABRB3-206, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-206ENST00000554556 ERC2O15083 957 aa26.54■■□□□ 1.84
GABRB3-206ENST00000554556 PGK1P00558 417 aa26.54■■□□□ 1.84
GABRB3-206ENST00000554556 ZNF865P0CJ78 1059 aaPredicted RBP26.54■■□□□ 1.84
GABRB3-206ENST00000554556 TSHZ3Q63HK5 1081 aa26.54■■□□□ 1.84
GABRB3-206ENST00000554556 BADQ92934 168 aa26.54■■□□□ 1.84
GABRB3-206ENST00000554556 MKL1Q969V6 931 aa26.54■■□□□ 1.84
GABRB3-206ENST00000554556 PDLIM7Q9NR12 457 aa26.54■■□□□ 1.84
GABRB3-206ENST00000554556 FEM1BQ9UK73 627 aa26.54■■□□□ 1.84
GABRB3-206ENST00000554556 TACC3Q9Y6A5 838 aa26.54■■□□□ 1.84
GABRB3-206ENST00000554556 IGKV6D-41A0A0C4DH26 115 aa26.53■■□□□ 1.84
GABRB3-206ENST00000554556 TAL1P17542 331 aaPredicted RBP26.53■■□□□ 1.84
GABRB3-206ENST00000554556 SLC4A3P48751 1232 aa26.53■■□□□ 1.84
GABRB3-206ENST00000554556 TLE2Q04725 743 aa26.53■■□□□ 1.84
GABRB3-206ENST00000554556 IFNL3Q8IZI9 196 aa26.53■■□□□ 1.84
GABRB3-206ENST00000554556 CPXCR1Q8N123 301 aa26.53■■□□□ 1.84
GABRB3-206ENST00000554556 EPB41L4AQ9HCS5 686 aaPredicted RBP26.53■■□□□ 1.84
GABRB3-206ENST00000554556 FAM184BQ9ULE4 1060 aa26.53■■□□□ 1.84
GABRB3-206ENST00000554556 TTC41PQ6P2S7 1318 aa26.53■■□□□ 1.84
GABRB3-206ENST00000554556 M0R2C6 588 aa26.52■■□□□ 1.84
GABRB3-206ENST00000554556 TTLL1O95922 423 aa26.52■■□□□ 1.84
GABRB3-206ENST00000554556 SLC3A2P08195 630 aaKnown RBP26.52■■□□□ 1.84
GABRB3-206ENST00000554556 PDE4BQ07343 736 aa26.52■■□□□ 1.84
GABRB3-206ENST00000554556 SHHQ15465 462 aa26.52■■□□□ 1.84
GABRB3-206ENST00000554556 KIFC2Q96AC6 838 aa26.52■■□□□ 1.84
GABRB3-206ENST00000554556 SYNGAP1Q96PV0 1343 aa26.52■■□□□ 1.84
GABRB3-206ENST00000554556 TSEN34Q9BSV6 310 aaKnown RBP26.52■■□□□ 1.84
GABRB3-206ENST00000554556 MTMR4Q9NYA4 1195 aa26.52■■□□□ 1.84
GABRB3-206ENST00000554556 RIPK3Q9Y572 518 aa26.52■■□□□ 1.84
GABRB3-206ENST00000554556 DNAH12Q6ZR08 3092 aa26.51■■□□□ 1.83
GABRB3-206ENST00000554556 PRDM1O75626 825 aa26.51■■□□□ 1.83
GABRB3-206ENST00000554556 ZNF697Q5TEC3 545 aa26.51■■□□□ 1.83
GABRB3-206ENST00000554556 MAMDC4Q6UXC1 1216 aa26.51■■□□□ 1.83
GABRB3-206ENST00000554556 ZNF467Q7Z7K2 595 aaPredicted RBP26.51■■□□□ 1.83
GABRB3-206ENST00000554556 CEP95Q96GE4 821 aa26.51■■□□□ 1.83
GABRB3-206ENST00000554556 FBXO40Q9UH90 709 aa26.51■■□□□ 1.83
GABRB3-206ENST00000554556 DNAJC25-GNG10A0A024R161 153 aa26.5■■□□□ 1.83
GABRB3-206ENST00000554556 TRIM43BA6NCK2 446 aa26.5■■□□□ 1.83
GABRB3-206ENST00000554556 CLTBP09497 229 aa26.5■■□□□ 1.83
GABRB3-206ENST00000554556 FDX1P10109 184 aa26.5■■□□□ 1.83
GABRB3-206ENST00000554556 SH3RF1Q7Z6J0 888 aa26.5■■□□□ 1.83
GABRB3-206ENST00000554556 GMCL1P1Q8NEA9 526 aa26.5■■□□□ 1.83
GABRB3-206ENST00000554556 TRIM43Q96BQ3 446 aaPredicted RBP26.5■■□□□ 1.83
GABRB3-206ENST00000554556 SLC38A10Q9HBR0 1119 aa26.5■■□□□ 1.83
GABRB3-206ENST00000554556 A0A1W2PQ45 241 aaPredicted RBP26.49■■□□□ 1.83
GABRB3-206ENST00000554556 A0A1W2PQY0 241 aa26.49■■□□□ 1.83
GABRB3-206ENST00000554556 TSPY3P0CV98 308 aa26.49■■□□□ 1.83
GABRB3-206ENST00000554556 TSPY8P0CW00 308 aa26.49■■□□□ 1.83
GABRB3-206ENST00000554556 OAZ1P54368 228 aa26.49■■□□□ 1.83
GABRB3-206ENST00000554556 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.49■■□□□ 1.83
GABRB3-206ENST00000554556 ANKRD35Q8N283 1001 aa26.49■■□□□ 1.83
GABRB3-206ENST00000554556 CHST13Q8NET6 341 aa26.49■■□□□ 1.83
GABRB3-206ENST00000554556 NEDD1Q8NHV4 660 aa26.49■■□□□ 1.83
GABRB3-206ENST00000554556 NUP133Q8WUM0 1156 aa26.49■■□□□ 1.83
GABRB3-206ENST00000554556 NAPBQ9H115 298 aa26.49■■□□□ 1.83
GABRB3-206ENST00000554556 RAVER2Q9HCJ3 691 aaKnown RBP26.49■■□□□ 1.83
GABRB3-206ENST00000554556 ADAMTS4O75173 837 aa26.48■■□□□ 1.83
GABRB3-206ENST00000554556 SNAI1O95863 264 aaPredicted RBP26.48■■□□□ 1.83
GABRB3-206ENST00000554556 C9orf50Q5SZB4 431 aa26.48■■□□□ 1.83
GABRB3-206ENST00000554556 SLFN13Q68D06 897 aa26.48■■□□□ 1.83
GABRB3-206ENST00000554556 FSD1Q9BTV5 496 aa26.48■■□□□ 1.83
GABRB3-206ENST00000554556 ZHX1Q9UKY1 873 aaPredicted RBP26.48■■□□□ 1.83
GABRB3-206ENST00000554556 MOXD2PA6NHM9 499 aa26.47■■□□□ 1.83
GABRB3-206ENST00000554556 BMP3P12645 472 aa26.47■■□□□ 1.83
GABRB3-206ENST00000554556 RAG1P15918 1043 aa26.47■■□□□ 1.83
GABRB3-206ENST00000554556 ACLYP53396 1101 aa26.47■■□□□ 1.83
GABRB3-206ENST00000554556 PPP4R3BQ5MIZ7 849 aa26.47■■□□□ 1.83
GABRB3-206ENST00000554556 LRRC47Q8N1G4 583 aaKnown RBP26.47■■□□□ 1.83
GABRB3-206ENST00000554556 FAM161BQ96MY7 647 aa26.47■■□□□ 1.83
GABRB3-206ENST00000554556 STARD7Q9NQZ5 370 aa26.47■■□□□ 1.83
GABRB3-206ENST00000554556 KIAA0355O15063 1070 aa26.46■■□□□ 1.83
GABRB3-206ENST00000554556 PQBP1O60828 265 aaKnown RBP26.46■■□□□ 1.83
GABRB3-206ENST00000554556 DUSP11O75319 330 aaKnown RBP26.46■■□□□ 1.83
GABRB3-206ENST00000554556 TFAP4Q01664 338 aa26.46■■□□□ 1.83
GABRB3-206ENST00000554556 CHURC1Q8WUH1 139 aa26.46■■□□□ 1.83
GABRB3-206ENST00000554556 GUCD1Q96NT3 240 aa26.46■■□□□ 1.83
GABRB3-206ENST00000554556 SEC62Q99442 399 aaKnown RBP26.46■■□□□ 1.83
GABRB3-206ENST00000554556 ABHD16BQ9H3Z7 469 aa26.46■■□□□ 1.83
GABRB3-206ENST00000554556 SPC25Q9HBM1 224 aa26.46■■□□□ 1.83
GABRB3-206ENST00000554556 TMEM39AQ9NV64 488 aa26.46■■□□□ 1.83
GABRB3-206ENST00000554556 ISY1Q9ULR0 285 aaKnown RBP26.46■■□□□ 1.83
GABRB3-206ENST00000554556 PLIN4Q96Q06 1357 aa26.46■■□□□ 1.83
GABRB3-206ENST00000554556 SYNRGQ9UMZ2 1314 aa26.45■■□□□ 1.83
GABRB3-206ENST00000554556 DCDC2CA8MYV0 355 aa26.45■■□□□ 1.82
GABRB3-206ENST00000554556 SMAD3P84022 425 aaKnown RBP26.45■■□□□ 1.82
GABRB3-206ENST00000554556 ACVR2BQ13705 512 aa26.45■■□□□ 1.82
GABRB3-206ENST00000554556 KLHDC9Q8NEP7 349 aa26.45■■□□□ 1.82
GABRB3-206ENST00000554556 PI4K2BQ8TCG2 481 aa26.45■■□□□ 1.82
GABRB3-206ENST00000554556 LENG1Q96BZ8 264 aaPredicted RBP26.45■■□□□ 1.82
GABRB3-206ENST00000554556 TOX2Q96NM4 488 aa26.45■■□□□ 1.82
GABRB3-206ENST00000554556 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.45■■□□□ 1.82
GABRB3-206ENST00000554556 COL6A3P12111 3177 aa26.44■■□□□ 1.82
GABRB3-206ENST00000554556 PPARAQ07869 468 aa26.44■■□□□ 1.82
GABRB3-206ENST00000554556 KCNA10Q16322 511 aa26.44■■□□□ 1.82
GABRB3-206ENST00000554556 ZMYM1Q5SVZ6 1142 aa26.44■■□□□ 1.82
GABRB3-206ENST00000554556 ANKRD33Q7Z3H0 272 aa26.44■■□□□ 1.82
GABRB3-206ENST00000554556 FAM160B2Q86V87 743 aa26.44■■□□□ 1.82
GABRB3-206ENST00000554556 ZBTB47Q9UFB7 747 aaPredicted RBP26.44■■□□□ 1.82
GABRB3-206ENST00000554556 TMEM232C9JQI7 657 aa26.43■■□□□ 1.82
GABRB3-206ENST00000554556 STAT2P52630 851 aa26.43■■□□□ 1.82
GABRB3-206ENST00000554556 PCSK9Q8NBP7 692 aaKnown RBP26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms