RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 MRFAP1Q9Y605 127 aa17.71■□□□□ 0.43
ARHGEF40-203ENST00000554514 NRAPQ86VF7 1730 aa17.71■□□□□ 0.43
ARHGEF40-203ENST00000554514 KCNJ18B7U540 433 aa17.71■□□□□ 0.43
ARHGEF40-203ENST00000554514 RPS6KA4O75676 772 aa17.71■□□□□ 0.43
ARHGEF40-203ENST00000554514 TRAPPC10P48553 1259 aa17.71■□□□□ 0.43
ARHGEF40-203ENST00000554514 MAP3K9P80192 1104 aa17.71■□□□□ 0.43
ARHGEF40-203ENST00000554514 KCNJ12Q14500 433 aa17.71■□□□□ 0.43
ARHGEF40-203ENST00000554514 BMS1Q14692 1282 aaKnown RBP17.71■□□□□ 0.43
ARHGEF40-203ENST00000554514 PUF60Q9UHX1 559 aaKnown RBP17.71■□□□□ 0.43
ARHGEF40-203ENST00000554514 MAD2L2Q9UI95 211 aa17.71■□□□□ 0.43
ARHGEF40-203ENST00000554514 AHDC1Q5TGY3 1603 aaPredicted RBP17.71■□□□□ 0.43
ARHGEF40-203ENST00000554514 CNTNAP4Q9C0A0 1308 aa17.71■□□□□ 0.43
ARHGEF40-203ENST00000554514 ABL1P00519 1130 aa17.71■□□□□ 0.43
ARHGEF40-203ENST00000554514 TM4SF1P30408 202 aa17.71■□□□□ 0.43
ARHGEF40-203ENST00000554514 COPB1P53618 953 aaKnown RBP17.71■□□□□ 0.43
ARHGEF40-203ENST00000554514 SLC35G1Q2M3R5 365 aa17.71■□□□□ 0.43
ARHGEF40-203ENST00000554514 ZNF569Q5MCW4 686 aa17.71■□□□□ 0.43
ARHGEF40-203ENST00000554514 DTHD1Q6ZMT9 781 aa17.71■□□□□ 0.43
ARHGEF40-203ENST00000554514 AMOTL1Q8IY63 956 aa17.71■□□□□ 0.43
ARHGEF40-203ENST00000554514 FHOD1Q9Y613 1164 aa17.71■□□□□ 0.43
ARHGEF40-203ENST00000554514 CYTH3O43739 400 aa17.7■□□□□ 0.42
ARHGEF40-203ENST00000554514 TFRCP02786 760 aaKnown RBP17.7■□□□□ 0.42
ARHGEF40-203ENST00000554514 PBX1P40424 430 aa17.7■□□□□ 0.42
ARHGEF40-203ENST00000554514 COL5A3P25940 1745 aaPredicted RBP17.7■□□□□ 0.42
ARHGEF40-203ENST00000554514 PNMA6AP0CW24 399 aaPredicted RBP17.7■□□□□ 0.42
ARHGEF40-203ENST00000554514 UBXN1Q04323 297 aa17.7■□□□□ 0.42
ARHGEF40-203ENST00000554514 RWDD2AQ9UIY3 292 aa17.7■□□□□ 0.42
ARHGEF40-203ENST00000554514 PCDHA6Q9UN73 950 aa17.7■□□□□ 0.42
ARHGEF40-203ENST00000554514 PCDHA8Q9Y5H6 950 aa17.7■□□□□ 0.42
ARHGEF40-203ENST00000554514 UBA7P41226 1012 aa17.69■□□□□ 0.42
ARHGEF40-203ENST00000554514 ZNF658Q5TYW1 1059 aaPredicted RBP17.69■□□□□ 0.42
ARHGEF40-203ENST00000554514 C4orf32Q8N8J7 132 aa17.69■□□□□ 0.42
ARHGEF40-203ENST00000554514 ANKRD20A12PQ8NF67 263 aa17.69■□□□□ 0.42
ARHGEF40-203ENST00000554514 DISC1Q9NRI5 854 aa17.69■□□□□ 0.42
ARHGEF40-203ENST00000554514 KIF5CO60282 957 aa17.69■□□□□ 0.42
ARHGEF40-203ENST00000554514 LONP1P36776 959 aaKnown RBP17.69■□□□□ 0.42
ARHGEF40-203ENST00000554514 TCP11X2Q5H9J9 407 aa17.69■□□□□ 0.42
ARHGEF40-203ENST00000554514 CNGA4Q8IV77 575 aa17.69■□□□□ 0.42
ARHGEF40-203ENST00000554514 RFC4P35249 363 aa17.68■□□□□ 0.42
ARHGEF40-203ENST00000554514 DGKHQ86XP1 1220 aa17.68■□□□□ 0.42
ARHGEF40-203ENST00000554514 TMEM47Q9BQJ4 181 aa17.68■□□□□ 0.42
ARHGEF40-203ENST00000554514 DLEC1Q9Y238 1755 aa17.68■□□□□ 0.42
ARHGEF40-203ENST00000554514 PMS1P54277 932 aaKnown RBP17.68■□□□□ 0.42
ARHGEF40-203ENST00000554514 ERVK-24P63145 666 aa17.68■□□□□ 0.42
ARHGEF40-203ENST00000554514 GRM4Q14833 912 aa17.68■□□□□ 0.42
ARHGEF40-203ENST00000554514 LETM2Q2VYF4 491 aa17.68■□□□□ 0.42
ARHGEF40-203ENST00000554514 CT47A1Q5JQC4 288 aaPredicted RBP17.68■□□□□ 0.42
ARHGEF40-203ENST00000554514 SLF1Q9BQI6 1058 aa17.68■□□□□ 0.42
ARHGEF40-203ENST00000554514 BAG3O95817 575 aa17.68■□□□□ 0.42
ARHGEF40-203ENST00000554514 GABPB1Q06547 395 aaPredicted RBP17.68■□□□□ 0.42
ARHGEF40-203ENST00000554514 KIF4BQ2VIQ3 1234 aa17.68■□□□□ 0.42
ARHGEF40-203ENST00000554514 WDR66Q8TBY9 1149 aa17.68■□□□□ 0.42
ARHGEF40-203ENST00000554514 RMND1Q9NWS8 449 aa17.68■□□□□ 0.42
ARHGEF40-203ENST00000554514 MYH8P13535 1937 aa17.67■□□□□ 0.42
ARHGEF40-203ENST00000554514 POLR3GO15318 223 aaPredicted RBP17.67■□□□□ 0.42
ARHGEF40-203ENST00000554514 KRT9P35527 623 aa17.67■□□□□ 0.42
ARHGEF40-203ENST00000554514 NAPAP54920 295 aa17.67■□□□□ 0.42
ARHGEF40-203ENST00000554514 ARL6IP4Q66PJ3 421 aaKnown RBP17.67■□□□□ 0.42
ARHGEF40-203ENST00000554514 USP17L2Q6R6M4 530 aa17.67■□□□□ 0.42
ARHGEF40-203ENST00000554514 ABHD10Q9NUJ1 306 aa17.67■□□□□ 0.42
ARHGEF40-203ENST00000554514 LIMA1Q9UHB6 759 aaKnown RBP17.67■□□□□ 0.42
ARHGEF40-203ENST00000554514 KLRF2D3W0D1 207 aa17.67■□□□□ 0.42
ARHGEF40-203ENST00000554514 NAALADL2Q58DX5 795 aa17.67■□□□□ 0.42
ARHGEF40-203ENST00000554514 NAA15Q9BXJ9 866 aaKnown RBP17.67■□□□□ 0.42
ARHGEF40-203ENST00000554514 MKRN1Q9UHC7 482 aaKnown RBP17.67■□□□□ 0.42
ARHGEF40-203ENST00000554514 LAMB1P07942 1786 aa17.67■□□□□ 0.42
ARHGEF40-203ENST00000554514 PDS5AQ29RF7 1337 aaKnown RBP17.66■□□□□ 0.42
ARHGEF40-203ENST00000554514 STXBP3O00186 592 aa17.66■□□□□ 0.42
ARHGEF40-203ENST00000554514 CCNT1O60563 726 aaKnown RBP17.66■□□□□ 0.42
ARHGEF40-203ENST00000554514 BTDP43251 543 aa17.66■□□□□ 0.42
ARHGEF40-203ENST00000554514 TERF2Q15554 542 aa17.66■□□□□ 0.42
ARHGEF40-203ENST00000554514 SLC35F6Q8N357 371 aa17.66■□□□□ 0.42
ARHGEF40-203ENST00000554514 TRIM47Q96LD4 638 aa17.66■□□□□ 0.42
ARHGEF40-203ENST00000554514 PYM1Q9BRP8 204 aaKnown RBP17.66■□□□□ 0.42
ARHGEF40-203ENST00000554514 KIAA1551Q9HCM1 1747 aa17.66■□□□□ 0.42
ARHGEF40-203ENST00000554514 ERICH4A6NGS2 130 aa17.66■□□□□ 0.42
ARHGEF40-203ENST00000554514 PARP1P09874 1014 aaKnown RBP17.66■□□□□ 0.42
ARHGEF40-203ENST00000554514 CHP1Q99653 195 aa17.66■□□□□ 0.42
ARHGEF40-203ENST00000554514 PARD6BQ9BYG5 372 aa17.66■□□□□ 0.42
ARHGEF40-203ENST00000554514 CCDC88AQ3V6T2 1871 aa17.66■□□□□ 0.42
ARHGEF40-203ENST00000554514 RASA1P20936 1047 aa17.65■□□□□ 0.42
ARHGEF40-203ENST00000554514 PLA2G4AP47712 749 aa17.65■□□□□ 0.42
ARHGEF40-203ENST00000554514 CCDC148Q8NFR7 591 aa17.65■□□□□ 0.42
ARHGEF40-203ENST00000554514 LRRC15Q8TF66 581 aa17.65■□□□□ 0.42
ARHGEF40-203ENST00000554514 GOLGA1Q92805 767 aa17.65■□□□□ 0.42
ARHGEF40-203ENST00000554514 FAM53CQ9NYF3 392 aa17.65■□□□□ 0.42
ARHGEF40-203ENST00000554514 GNAQP50148 359 aa17.65■□□□□ 0.42
ARHGEF40-203ENST00000554514 GRAPQ13588 217 aa17.65■□□□□ 0.42
ARHGEF40-203ENST00000554514 CCDC178Q5BJE1 867 aa17.65■□□□□ 0.42
ARHGEF40-203ENST00000554514 ZNF804AQ7Z570 1209 aa17.65■□□□□ 0.42
ARHGEF40-203ENST00000554514 CNBD1Q8NA66 436 aa17.65■□□□□ 0.42
ARHGEF40-203ENST00000554514 GRAPLQ8TC17 118 aaPredicted RBP17.65■□□□□ 0.42
ARHGEF40-203ENST00000554514 EYA3Q99504 573 aa17.65■□□□□ 0.42
ARHGEF40-203ENST00000554514 BARHL2Q9NY43 387 aa17.65■□□□□ 0.42
ARHGEF40-203ENST00000554514 TFR2Q9UP52 801 aa17.65■□□□□ 0.42
ARHGEF40-203ENST00000554514 UFL1O94874 794 aa17.65■□□□□ 0.42
ARHGEF40-203ENST00000554514 SPAG1Q07617 926 aa17.65■□□□□ 0.42
ARHGEF40-203ENST00000554514 TEX11Q8IYF3 940 aa17.65■□□□□ 0.42
ARHGEF40-203ENST00000554514 UBA5Q9GZZ9 404 aa17.65■□□□□ 0.42
ARHGEF40-203ENST00000554514 SH3GLB2Q9NR46 395 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms