RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 SELENOOQ9BVL4 669 aa18.99■□□□□ 0.63
PPP4R3A-202ENST00000554390 CEP83Q9Y592 693 aa18.99■□□□□ 0.63
PPP4R3A-202ENST00000554390 INPP5BP32019 993 aa18.99■□□□□ 0.63
PPP4R3A-202ENST00000554390 USP8P40818 1118 aa18.99■□□□□ 0.63
PPP4R3A-202ENST00000554390 TRIM28Q13263 835 aaKnown RBP18.99■□□□□ 0.63
PPP4R3A-202ENST00000554390 CDKAL1Q5VV42 579 aa18.99■□□□□ 0.63
PPP4R3A-202ENST00000554390 CYP26C1Q6V0L0 522 aa18.99■□□□□ 0.63
PPP4R3A-202ENST00000554390 SPATA20Q8TB22 786 aa18.99■□□□□ 0.63
PPP4R3A-202ENST00000554390 XDHP47989 1333 aa18.99■□□□□ 0.63
PPP4R3A-202ENST00000554390 KCTD19Q17RG1 926 aaPredicted RBP18.99■□□□□ 0.63
PPP4R3A-202ENST00000554390 WASF1Q92558 559 aa18.99■□□□□ 0.63
PPP4R3A-202ENST00000554390 PLA2G12BQ9BX93 195 aa18.99■□□□□ 0.63
PPP4R3A-202ENST00000554390 CAPS2Q9BXY5 557 aa18.99■□□□□ 0.63
PPP4R3A-202ENST00000554390 NACAP1Q9BZK3 213 aa18.99■□□□□ 0.63
PPP4R3A-202ENST00000554390 ABCC12Q96J65 1359 aa18.98■□□□□ 0.63
PPP4R3A-202ENST00000554390 NKRFO15226 690 aaKnown RBP eCLIP18.98■□□□□ 0.63
PPP4R3A-202ENST00000554390 PPFIA1Q13136 1202 aa18.98■□□□□ 0.63
PPP4R3A-202ENST00000554390 GPKOWQ92917 476 aaPredicted RBP eCLIP18.98■□□□□ 0.632e-12■■■□□ 18.5
PPP4R3A-202ENST00000554390 FBXO3Q9UK99 471 aa18.98■□□□□ 0.63
PPP4R3A-202ENST00000554390 ATP1A1P05023 1023 aaKnown RBP18.98■□□□□ 0.63
PPP4R3A-202ENST00000554390 UQCRFS1P1P0C7P4 283 aa18.98■□□□□ 0.63
PPP4R3A-202ENST00000554390 CYP19A1P11511 503 aaPredicted RBP18.98■□□□□ 0.63
PPP4R3A-202ENST00000554390 FGFR2P21802 821 aa18.98■□□□□ 0.63
PPP4R3A-202ENST00000554390 SHTN1A0MZ66 631 aa18.97■□□□□ 0.63
PPP4R3A-202ENST00000554390 GOLGA6BA6NDN3 693 aa18.97■□□□□ 0.63
PPP4R3A-202ENST00000554390 CYP2D6P10635 497 aa18.97■□□□□ 0.63
PPP4R3A-202ENST00000554390 KRT9P35527 623 aa18.97■□□□□ 0.63
PPP4R3A-202ENST00000554390 IL17AQ16552 155 aa18.97■□□□□ 0.63
PPP4R3A-202ENST00000554390 KANK3Q6NY19 840 aa18.97■□□□□ 0.63
PPP4R3A-202ENST00000554390 POTEDQ86YR6 584 aa18.97■□□□□ 0.63
PPP4R3A-202ENST00000554390 SAMM50Q9Y512 469 aa18.97■□□□□ 0.63
PPP4R3A-202ENST00000554390 SAR1BQ9Y6B6 198 aa18.97■□□□□ 0.63
PPP4R3A-202ENST00000554390 UBR2Q8IWV8 1755 aa18.97■□□□□ 0.63
PPP4R3A-202ENST00000554390 TARSL2A2RTX5 802 aaKnown RBP18.97■□□□□ 0.63
PPP4R3A-202ENST00000554390 KRT2P35908 639 aa18.97■□□□□ 0.63
PPP4R3A-202ENST00000554390 GNGT1P63211 74 aa18.97■□□□□ 0.63
PPP4R3A-202ENST00000554390 IFIT1BQ5T764 474 aaKnown RBP18.97■□□□□ 0.63
PPP4R3A-202ENST00000554390 TTC19Q6DKK2 380 aaPredicted RBP18.97■□□□□ 0.63
PPP4R3A-202ENST00000554390 BICDL1Q6ZP65 573 aa18.97■□□□□ 0.63
PPP4R3A-202ENST00000554390 CNNM2Q9H8M5 875 aa18.97■□□□□ 0.63
PPP4R3A-202ENST00000554390 DDX60Q8IY21 1712 aaKnown RBP18.97■□□□□ 0.63
PPP4R3A-202ENST00000554390 ITIH6Q6UXX5 1313 aa18.97■□□□□ 0.63
PPP4R3A-202ENST00000554390 EIF3HO15372 352 aaKnown RBP eCLIP18.96■□□□□ 0.632e-11■□□□□ 11.2
PPP4R3A-202ENST00000554390 KLK7P49862 253 aa18.96■□□□□ 0.63
PPP4R3A-202ENST00000554390 PMS1P54277 932 aaKnown RBP18.96■□□□□ 0.63
PPP4R3A-202ENST00000554390 PPARDQ03181 441 aa18.96■□□□□ 0.63
PPP4R3A-202ENST00000554390 CCNI2Q6ZMN8 369 aaPredicted RBP18.96■□□□□ 0.63
PPP4R3A-202ENST00000554390 RASSF8Q8NHQ8 419 aa18.96■□□□□ 0.63
PPP4R3A-202ENST00000554390 STAG1Q8WVM7 1258 aa18.96■□□□□ 0.63
PPP4R3A-202ENST00000554390 CPVLQ9H3G5 476 aa18.96■□□□□ 0.63
PPP4R3A-202ENST00000554390 DONSONQ9NYP3 566 aa18.96■□□□□ 0.63
PPP4R3A-202ENST00000554390 REXO2Q9Y3B8 237 aaKnown RBP18.96■□□□□ 0.63
PPP4R3A-202ENST00000554390 GRIN2DO15399 1336 aa18.96■□□□□ 0.63
PPP4R3A-202ENST00000554390 CADPS2Q86UW7 1296 aa18.96■□□□□ 0.63
PPP4R3A-202ENST00000554390 CCDC196A0A1B0GTZ2 297 aa18.96■□□□□ 0.63
PPP4R3A-202ENST00000554390 PSMD14O00487 310 aa18.96■□□□□ 0.63
PPP4R3A-202ENST00000554390 TTC38Q5R3I4 469 aa18.96■□□□□ 0.63
PPP4R3A-202ENST00000554390 CNPY4Q8N129 248 aa18.96■□□□□ 0.63
PPP4R3A-202ENST00000554390 BTG4Q9NY30 223 aa18.96■□□□□ 0.63
PPP4R3A-202ENST00000554390 EPN1Q9Y6I3 576 aaPredicted RBP18.96■□□□□ 0.63
PPP4R3A-202ENST00000554390 STK36Q9NRP7 1315 aa18.95■□□□□ 0.62
PPP4R3A-202ENST00000554390 KLRK1P26718 216 aa18.95■□□□□ 0.62
PPP4R3A-202ENST00000554390 UBXN1Q04323 297 aa18.95■□□□□ 0.62
PPP4R3A-202ENST00000554390 EP400NLQ6ZTU2 488 aa18.95■□□□□ 0.62
PPP4R3A-202ENST00000554390 CAPN7Q9Y6W3 813 aa18.95■□□□□ 0.62
PPP4R3A-202ENST00000554390 MYH2Q9UKX2 1941 aa18.95■□□□□ 0.62
PPP4R3A-202ENST00000554390 PARP4Q9UKK3 1724 aaKnown RBP18.95■□□□□ 0.62
PPP4R3A-202ENST00000554390 CHRNDQ07001 517 aa18.95■□□□□ 0.62
PPP4R3A-202ENST00000554390 NKX1-1Q15270 411 aaPredicted RBP18.95■□□□□ 0.62
PPP4R3A-202ENST00000554390 SRBD1Q8N5C6 995 aaKnown RBP18.95■□□□□ 0.62
PPP4R3A-202ENST00000554390 BANK1Q8NDB2 785 aa18.95■□□□□ 0.62
PPP4R3A-202ENST00000554390 PSMB7Q99436 277 aa18.95■□□□□ 0.62
PPP4R3A-202ENST00000554390 DUSP10Q9Y6W6 482 aa18.95■□□□□ 0.62
PPP4R3A-202ENST00000554390 USP17L12C9JPN9 530 aa18.94■□□□□ 0.62
PPP4R3A-202ENST00000554390 USP17L21D6R901 530 aa18.94■□□□□ 0.62
PPP4R3A-202ENST00000554390 NDUFA10O95299 355 aa18.94■□□□□ 0.62
PPP4R3A-202ENST00000554390 SEC23AQ15436 765 aa18.94■□□□□ 0.62
PPP4R3A-202ENST00000554390 NELFBQ8WX92 580 aa18.94■□□□□ 0.62
PPP4R3A-202ENST00000554390 SUFUQ9UMX1 484 aa18.94■□□□□ 0.62
PPP4R3A-202ENST00000554390 TNS2Q63HR2 1409 aa18.94■□□□□ 0.62
PPP4R3A-202ENST00000554390 NPY5RQ15761 445 aa18.94■□□□□ 0.62
PPP4R3A-202ENST00000554390 C3orf67Q6ZVT6 689 aa18.94■□□□□ 0.62
PPP4R3A-202ENST00000554390 PRPF38AQ8NAV1 312 aaKnown RBP18.94■□□□□ 0.62
PPP4R3A-202ENST00000554390 ATRNO75882 1429 aa18.94■□□□□ 0.62
PPP4R3A-202ENST00000554390 MAGEB6P1A0A0J9YX57 407 aa18.93■□□□□ 0.62
PPP4R3A-202ENST00000554390 CLGNO14967 610 aa18.93■□□□□ 0.62
PPP4R3A-202ENST00000554390 SEMA3EO15041 775 aa18.93■□□□□ 0.62
PPP4R3A-202ENST00000554390 ZNF185O15231 689 aa18.93■□□□□ 0.62
PPP4R3A-202ENST00000554390 MYCNP04198 464 aaPredicted RBP18.93■□□□□ 0.62
PPP4R3A-202ENST00000554390 NLRP5P59047 1200 aa18.93■□□□□ 0.62
PPP4R3A-202ENST00000554390 ALX1Q15699 326 aa18.93■□□□□ 0.62
PPP4R3A-202ENST00000554390 ZNF579Q8NAF0 562 aaKnown RBP18.93■□□□□ 0.62
PPP4R3A-202ENST00000554390 HPS3Q969F9 1004 aa18.93■□□□□ 0.62
PPP4R3A-202ENST00000554390 ZSCAN10Q96SZ4 725 aaPredicted RBP18.93■□□□□ 0.62
PPP4R3A-202ENST00000554390 JPH2Q9BR39 696 aaPredicted RBP18.93■□□□□ 0.62
PPP4R3A-202ENST00000554390 COL5A2P05997 1499 aaPredicted RBP18.93■□□□□ 0.62
PPP4R3A-202ENST00000554390 PRCPP42785 496 aa18.93■□□□□ 0.62
PPP4R3A-202ENST00000554390 ESR2Q92731 530 aa18.93■□□□□ 0.62
PPP4R3A-202ENST00000554390 PHF20Q9BVI0 1012 aa18.93■□□□□ 0.62
PPP4R3A-202ENST00000554390 CARD10Q9BWT7 1032 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms