RNA–Protein interactions for RNA: ENST00000554131.5

PSEN1-210, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-210ENST00000554131 CALM2P0DP24 149 aa21.5■■□□□ 1.03
PSEN1-210ENST00000554131 CALM3P0DP25 149 aa21.5■■□□□ 1.03
PSEN1-210ENST00000554131 SLC16A2P36021 539 aa21.5■■□□□ 1.03
PSEN1-210ENST00000554131 FAM160B2Q86V87 743 aa21.5■■□□□ 1.03
PSEN1-210ENST00000554131 FANCBQ8NB91 859 aa21.5■■□□□ 1.03
PSEN1-210ENST00000554131 ZNF274Q96GC6 653 aaPredicted RBP21.5■■□□□ 1.03
PSEN1-210ENST00000554131 GOLGA8BA8MQT2 603 aa21.49■■□□□ 1.03
PSEN1-210ENST00000554131 TLR2O60603 784 aa21.49■■□□□ 1.03
PSEN1-210ENST00000554131 PEX10O60683 326 aa21.49■■□□□ 1.03
PSEN1-210ENST00000554131 TRPA1O75762 1119 aa21.49■■□□□ 1.03
PSEN1-210ENST00000554131 LARGE1O95461 756 aa21.49■■□□□ 1.03
PSEN1-210ENST00000554131 BCRP11274 1271 aa21.49■■□□□ 1.03
PSEN1-210ENST00000554131 CDC27P30260 824 aa21.49■■□□□ 1.03
PSEN1-210ENST00000554131 ANKRD1Q15327 319 aa21.49■■□□□ 1.03
PSEN1-210ENST00000554131 C17orf99Q6UX52 265 aa21.49■■□□□ 1.03
PSEN1-210ENST00000554131 CCDC144CPQ8IYA2 1237 aa21.49■■□□□ 1.03
PSEN1-210ENST00000554131 PRPF38AQ8NAV1 312 aaKnown RBP21.49■■□□□ 1.03
PSEN1-210ENST00000554131 CHURC1Q8WUH1 139 aa21.49■■□□□ 1.03
PSEN1-210ENST00000554131 UBA5Q9GZZ9 404 aa21.49■■□□□ 1.03
PSEN1-210ENST00000554131 TXNRD2Q9NNW7 524 aa21.49■■□□□ 1.03
PSEN1-210ENST00000554131 HOXC10Q9NYD6 342 aa21.49■■□□□ 1.03
PSEN1-210ENST00000554131 RBPJLQ9UBG7 517 aa21.49■■□□□ 1.03
PSEN1-210ENST00000554131 PRR12Q9ULL5 1215 aa21.49■■□□□ 1.03
PSEN1-210ENST00000554131 KLRF2D3W0D1 207 aa21.48■■□□□ 1.03
PSEN1-210ENST00000554131 VWA5AO00534 786 aa21.48■■□□□ 1.03
PSEN1-210ENST00000554131 CYTH3O43739 400 aa21.48■■□□□ 1.03
PSEN1-210ENST00000554131 PLEKHA8P1O95397 391 aa21.48■■□□□ 1.03
PSEN1-210ENST00000554131 FUT2Q10981 343 aa21.48■■□□□ 1.03
PSEN1-210ENST00000554131 SYDE2Q5VT97 1194 aa21.48■■□□□ 1.03
PSEN1-210ENST00000554131 IL27Q8NEV9 243 aa21.48■■□□□ 1.03
PSEN1-210ENST00000554131 ZFYVE28Q9HCC9 887 aa21.48■■□□□ 1.03
PSEN1-210ENST00000554131 BTBD7Q9P203 1132 aa21.48■■□□□ 1.03
PSEN1-210ENST00000554131 GOLGA8AA7E2F4 631 aa21.47■■□□□ 1.03
PSEN1-210ENST00000554131 TBC1D8O95759 1140 aa21.47■■□□□ 1.03
PSEN1-210ENST00000554131 ME3Q16798 604 aa21.47■■□□□ 1.03
PSEN1-210ENST00000554131 SYNE3Q6ZMZ3 975 aa21.47■■□□□ 1.03
PSEN1-210ENST00000554131 TMTC3Q6ZXV5 915 aa21.47■■□□□ 1.03
PSEN1-210ENST00000554131 SRBD1Q8N5C6 995 aaKnown RBP21.47■■□□□ 1.03
PSEN1-210ENST00000554131 CTCFLQ8NI51 663 aaPredicted RBP21.47■■□□□ 1.03
PSEN1-210ENST00000554131 KIFC2Q96AC6 838 aa21.47■■□□□ 1.03
PSEN1-210ENST00000554131 MTMR8Q96EF0 704 aa21.47■■□□□ 1.03
PSEN1-210ENST00000554131 RIOX1Q9H6W3 641 aa21.47■■□□□ 1.03
PSEN1-210ENST00000554131 SLC38A10Q9HBR0 1119 aa21.47■■□□□ 1.03
PSEN1-210ENST00000554131 MORF4L1Q9UBU8 362 aa21.47■■□□□ 1.03
PSEN1-210ENST00000554131 KIF5BP33176 963 aa21.46■■□□□ 1.03
PSEN1-210ENST00000554131 GCLCP48506 637 aaPredicted RBP21.46■■□□□ 1.03
PSEN1-210ENST00000554131 METAP2P50579 478 aaKnown RBP eCLIP21.46■■□□□ 1.03
PSEN1-210ENST00000554131 ST3GAL1Q11201 340 aa21.46■■□□□ 1.03
PSEN1-210ENST00000554131 RTN1Q16799 776 aa21.46■■□□□ 1.03
PSEN1-210ENST00000554131 ADGRF4Q8IZF3 695 aa21.46■■□□□ 1.03
PSEN1-210ENST00000554131 SMCR8Q8TEV9 937 aaPredicted RBP21.46■■□□□ 1.03
PSEN1-210ENST00000554131 RANBP17Q9H2T7 1088 aaKnown RBP21.46■■□□□ 1.03
PSEN1-210ENST00000554131 JMJD4Q9H9V9 463 aa21.46■■□□□ 1.03
PSEN1-210ENST00000554131 CPA4Q9UI42 421 aa21.46■■□□□ 1.03
PSEN1-210ENST00000554131 ZNF536O15090 1300 aa21.46■■□□□ 1.03
PSEN1-210ENST00000554131 PFKFB2O60825 505 aa21.45■■□□□ 1.02
PSEN1-210ENST00000554131 SMARCA1P28370 1054 aa21.45■■□□□ 1.02
PSEN1-210ENST00000554131 ADD1P35611 737 aaKnown RBP21.45■■□□□ 1.02
PSEN1-210ENST00000554131 TMEM132BQ14DG7 1078 aa21.45■■□□□ 1.02
PSEN1-210ENST00000554131 NTRK3Q16288 839 aa21.45■■□□□ 1.02
PSEN1-210ENST00000554131 NOL8Q76FK4 1167 aaKnown RBP21.45■■□□□ 1.02
PSEN1-210ENST00000554131 CMTR1Q8N1G2 835 aaKnown RBP21.45■■□□□ 1.02
PSEN1-210ENST00000554131 GTF3C2Q8WUA4 911 aaPredicted RBP21.45■■□□□ 1.02
PSEN1-210ENST00000554131 SPZ1Q9BXG8 430 aa21.45■■□□□ 1.02
PSEN1-210ENST00000554131 NCOA5Q9HCD5 579 aaKnown RBP21.45■■□□□ 1.02
PSEN1-210ENST00000554131 RBM28Q9NW13 759 aaKnown RBP21.45■■□□□ 1.02
PSEN1-210ENST00000554131 ZNF214Q9UL59 606 aaPredicted RBP21.45■■□□□ 1.02
PSEN1-210ENST00000554131 ISY1Q9ULR0 285 aaKnown RBP21.45■■□□□ 1.02
PSEN1-210ENST00000554131 RABGAP1Q9Y3P9 1069 aa21.45■■□□□ 1.02
PSEN1-210ENST00000554131 ZSWIM8A7E2V4 1837 aa21.44■■□□□ 1.02
PSEN1-210ENST00000554131 ATP2A1O14983 1001 aa21.44■■□□□ 1.02
PSEN1-210ENST00000554131 SNAP25P60880 206 aa21.44■■□□□ 1.02
PSEN1-210ENST00000554131 CCT2P78371 535 aaKnown RBP21.44■■□□□ 1.02
PSEN1-210ENST00000554131 SCRN1Q12765 414 aa21.44■■□□□ 1.02
PSEN1-210ENST00000554131 IKQ13123 557 aaPredicted RBP21.44■■□□□ 1.02
PSEN1-210ENST00000554131 PPP2R5BQ15173 497 aa21.44■■□□□ 1.02
PSEN1-210ENST00000554131 FAM110CQ1W6H9 321 aa21.44■■□□□ 1.02
PSEN1-210ENST00000554131 Q3C1V9 767 aa21.44■■□□□ 1.02
PSEN1-210ENST00000554131 SAMD1Q6SPF0 538 aaPredicted RBP21.44■■□□□ 1.02
PSEN1-210ENST00000554131 ANKRD13CQ8N6S4 541 aa21.44■■□□□ 1.02
PSEN1-210ENST00000554131 MB21D1Q8N884 522 aa21.44■■□□□ 1.02
PSEN1-210ENST00000554131 LZTS2Q9BRK4 669 aa21.44■■□□□ 1.02
PSEN1-210ENST00000554131 NAP1L2Q9ULW6 460 aaPredicted RBP21.44■■□□□ 1.02
PSEN1-210ENST00000554131 LIMCH1Q9UPQ0 1083 aa21.44■■□□□ 1.02
PSEN1-210ENST00000554131 CNTNAP5Q8WYK1 1306 aa21.44■■□□□ 1.02
PSEN1-210ENST00000554131 ST18O60284 1047 aa21.43■■□□□ 1.02
PSEN1-210ENST00000554131 FDX1P10109 184 aa21.43■■□□□ 1.02
PSEN1-210ENST00000554131 GNAQP50148 359 aa21.43■■□□□ 1.02
PSEN1-210ENST00000554131 ERVK-9P63128 1117 aa21.43■■□□□ 1.02
PSEN1-210ENST00000554131 ERVK-24P63145 666 aa21.43■■□□□ 1.02
PSEN1-210ENST00000554131 STK3Q13188 491 aa21.43■■□□□ 1.02
PSEN1-210ENST00000554131 NOM1Q5C9Z4 860 aaKnown RBP21.43■■□□□ 1.02
PSEN1-210ENST00000554131 SMCHD1A6NHR9 2005 aa21.42■■□□□ 1.02
PSEN1-210ENST00000554131 PAGR1Q9BTK6 254 aa21.42■■□□□ 1.02
PSEN1-210ENST00000554131 TSKSQ9UJT2 592 aa21.42■■□□□ 1.02
PSEN1-210ENST00000554131 BAZ2BQ9UIF8 2168 aaKnown RBP21.41■■□□□ 1.02
PSEN1-210ENST00000554131 PPP1R11O60927 126 aaPredicted RBP21.41■■□□□ 1.02
PSEN1-210ENST00000554131 OAZ1P54368 228 aa21.41■■□□□ 1.02
PSEN1-210ENST00000554131 CAP1Q01518 475 aa21.41■■□□□ 1.02
PSEN1-210ENST00000554131 NECAB1Q8N987 351 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms