RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 CTDP1Q9Y5B0 961 aaPredicted RBP12.08□□□□□ -0.48
TMEM55B-205ENST00000554028 SSC5DA1L4H1 1573 aa12.08□□□□□ -0.48
TMEM55B-205ENST00000554028 CNTNAP5Q8WYK1 1306 aa12.08□□□□□ -0.48
TMEM55B-205ENST00000554028 hCG_1984214I3L0E3 225 aa12.07□□□□□ -0.48
TMEM55B-205ENST00000554028 PLA2G6O60733 806 aa12.07□□□□□ -0.48
TMEM55B-205ENST00000554028 CALML3P27482 149 aa12.07□□□□□ -0.48
TMEM55B-205ENST00000554028 FOSBP53539 338 aa12.07□□□□□ -0.48
TMEM55B-205ENST00000554028 FAM83BQ5T0W9 1011 aa12.07□□□□□ -0.48
TMEM55B-205ENST00000554028 LDLRAD1Q5T700 205 aa12.07□□□□□ -0.48
TMEM55B-205ENST00000554028 SYDE2Q5VT97 1194 aa12.07□□□□□ -0.48
TMEM55B-205ENST00000554028 FOXD4L5Q5VV16 416 aaPredicted RBP12.07□□□□□ -0.48
TMEM55B-205ENST00000554028 TTBK2Q6IQ55 1244 aa12.07□□□□□ -0.48
TMEM55B-205ENST00000554028 HOMER1Q86YM7 354 aa12.07□□□□□ -0.48
TMEM55B-205ENST00000554028 ADGRF4Q8IZF3 695 aa12.07□□□□□ -0.48
TMEM55B-205ENST00000554028 ZNF713Q8N859 430 aaPredicted RBP12.07□□□□□ -0.48
TMEM55B-205ENST00000554028 CCDC148Q8NFR7 591 aa12.07□□□□□ -0.48
TMEM55B-205ENST00000554028 FBXO18Q8NFZ0 1043 aa12.07□□□□□ -0.48
TMEM55B-205ENST00000554028 FOXD4L4Q8WXT5 416 aaPredicted RBP12.07□□□□□ -0.48
TMEM55B-205ENST00000554028 GBP4Q96PP9 640 aa12.07□□□□□ -0.48
TMEM55B-205ENST00000554028 SH3GLB2Q9NR46 395 aa12.07□□□□□ -0.48
TMEM55B-205ENST00000554028 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.07□□□□□ -0.48
TMEM55B-205ENST00000554028 MTMR6Q9Y217 621 aa12.07□□□□□ -0.48
TMEM55B-205ENST00000554028 AFG3L2Q9Y4W6 797 aa12.07□□□□□ -0.48
TMEM55B-205ENST00000554028 SNCAIPQ9Y6H5 919 aa12.07□□□□□ -0.48
TMEM55B-205ENST00000554028 MYH8P13535 1937 aa12.07□□□□□ -0.48
TMEM55B-205ENST00000554028 PNMA6FA0A0J9YX94 578 aa12.06□□□□□ -0.48
TMEM55B-205ENST00000554028 hCG_1642624A0A1W2PR95 340 aa12.06□□□□□ -0.48
TMEM55B-205ENST00000554028 SPDYE5A6NIY4 337 aa12.06□□□□□ -0.48
TMEM55B-205ENST00000554028 CXCL11O14625 94 aa12.06□□□□□ -0.48
TMEM55B-205ENST00000554028 F13A1P00488 732 aa12.06□□□□□ -0.48
TMEM55B-205ENST00000554028 SLC16A2P36021 539 aa12.06□□□□□ -0.48
TMEM55B-205ENST00000554028 NLRP5P59047 1200 aa12.06□□□□□ -0.48
TMEM55B-205ENST00000554028 GUCY1B3Q02153 619 aa12.06□□□□□ -0.48
TMEM55B-205ENST00000554028 KRT40Q6A162 431 aa12.06□□□□□ -0.48
TMEM55B-205ENST00000554028 BTNL9Q6UXG8 535 aa12.06□□□□□ -0.48
TMEM55B-205ENST00000554028 MOB2Q70IA6 237 aa12.06□□□□□ -0.48
TMEM55B-205ENST00000554028 HEATR3Q7Z4Q2 680 aa12.06□□□□□ -0.48
TMEM55B-205ENST00000554028 PRPF38AQ8NAV1 312 aaKnown RBP12.06□□□□□ -0.48
TMEM55B-205ENST00000554028 SMC1BQ8NDV3 1235 aa12.06□□□□□ -0.48
TMEM55B-205ENST00000554028 OTUD5Q96G74 571 aa12.06□□□□□ -0.48
TMEM55B-205ENST00000554028 PIGSQ96S52 555 aa12.06□□□□□ -0.48
TMEM55B-205ENST00000554028 NUP88Q99567 741 aaPredicted RBP12.06□□□□□ -0.48
TMEM55B-205ENST00000554028 TANGO6Q9C0B7 1094 aa12.06□□□□□ -0.48
TMEM55B-205ENST00000554028 GOLGA6L22H0YM25 854 aa12.05□□□□□ -0.48
TMEM55B-205ENST00000554028 ZBTB5O15062 677 aa12.05□□□□□ -0.48
TMEM55B-205ENST00000554028 CYTH3O43739 400 aa12.05□□□□□ -0.48
TMEM55B-205ENST00000554028 FDX1P10109 184 aa12.05□□□□□ -0.48
TMEM55B-205ENST00000554028 HMGCS2P54868 508 aa12.05□□□□□ -0.48
TMEM55B-205ENST00000554028 PPIL2Q13356 520 aa12.05□□□□□ -0.48
TMEM55B-205ENST00000554028 PKN1Q16512 942 aa12.05□□□□□ -0.48
TMEM55B-205ENST00000554028 SH3D19Q5HYK7 790 aa12.05□□□□□ -0.48
TMEM55B-205ENST00000554028 GALNT17Q6IS24 598 aa12.05□□□□□ -0.48
TMEM55B-205ENST00000554028 RASGRP2Q7LDG7 609 aa12.05□□□□□ -0.48
TMEM55B-205ENST00000554028 KIFC2Q96AC6 838 aa12.05□□□□□ -0.48
TMEM55B-205ENST00000554028 C12orf42Q96LP6 360 aa12.05□□□□□ -0.48
TMEM55B-205ENST00000554028 CPVLQ9H3G5 476 aa12.05□□□□□ -0.48
TMEM55B-205ENST00000554028 JMJD4Q9H9V9 463 aa12.05□□□□□ -0.48
TMEM55B-205ENST00000554028 EMILIN3Q9NT22 766 aa12.05□□□□□ -0.48
TMEM55B-205ENST00000554028 PNMA2Q9UL42 364 aa12.05□□□□□ -0.48
TMEM55B-205ENST00000554028 GREB1LQ9C091 1923 aaPredicted RBP12.05□□□□□ -0.48
TMEM55B-205ENST00000554028 USP17L15C9J2P7 530 aa12.04□□□□□ -0.48
TMEM55B-205ENST00000554028 USP17L13C9JLJ4 530 aa12.04□□□□□ -0.48
TMEM55B-205ENST00000554028 USP17L11C9JVI0 530 aa12.04□□□□□ -0.48
TMEM55B-205ENST00000554028 USP17L18D6R9N7 530 aa12.04□□□□□ -0.48
TMEM55B-205ENST00000554028 USP17L22D6RA61 530 aa12.04□□□□□ -0.48
TMEM55B-205ENST00000554028 USP17L17D6RBQ6 530 aa12.04□□□□□ -0.48
TMEM55B-205ENST00000554028 USP17L19D6RCP7 530 aa12.04□□□□□ -0.48
TMEM55B-205ENST00000554028 USP17L20D6RJB6 530 aa12.04□□□□□ -0.48
TMEM55B-205ENST00000554028 ITGBL1O95965 494 aaPredicted RBP12.04□□□□□ -0.48
TMEM55B-205ENST00000554028 MMP1P03956 469 aa12.04□□□□□ -0.48
TMEM55B-205ENST00000554028 PRR29P0C7W0 189 aa12.04□□□□□ -0.48
TMEM55B-205ENST00000554028 VCAM1P19320 739 aa12.04□□□□□ -0.48
TMEM55B-205ENST00000554028 GNA11P29992 359 aa12.04□□□□□ -0.48
TMEM55B-205ENST00000554028 NAPAP54920 295 aa12.04□□□□□ -0.48
TMEM55B-205ENST00000554028 USP17L24Q0WX57 530 aa12.04□□□□□ -0.48
TMEM55B-205ENST00000554028 PKP1Q13835 747 aa12.04□□□□□ -0.48
TMEM55B-205ENST00000554028 OTUD7BQ6GQQ9 843 aa12.04□□□□□ -0.48
TMEM55B-205ENST00000554028 FASTKD5Q7L8L6 764 aaKnown RBP12.04□□□□□ -0.48
TMEM55B-205ENST00000554028 BRAPQ7Z569 592 aa12.04□□□□□ -0.48
TMEM55B-205ENST00000554028 BICD2Q8TD16 824 aa12.04□□□□□ -0.48
TMEM55B-205ENST00000554028 TNPO1Q92973 898 aaKnown RBP12.04□□□□□ -0.48
TMEM55B-205ENST00000554028 OPTNQ96CV9 577 aa12.04□□□□□ -0.48
TMEM55B-205ENST00000554028 CLMNQ96JQ2 1002 aa12.04□□□□□ -0.48
TMEM55B-205ENST00000554028 AIFM3Q96NN9 605 aa12.04□□□□□ -0.48
TMEM55B-205ENST00000554028 SLF1Q9BQI6 1058 aa12.04□□□□□ -0.48
TMEM55B-205ENST00000554028 AMNQ9BXJ7 453 aa12.04□□□□□ -0.48
TMEM55B-205ENST00000554028 GLT8D2Q9H1C3 349 aa12.04□□□□□ -0.48
TMEM55B-205ENST00000554028 RPAP3Q9H6T3 665 aaPredicted RBP12.04□□□□□ -0.48
TMEM55B-205ENST00000554028 C6orf50Q9HD87 102 aa12.04□□□□□ -0.48
TMEM55B-205ENST00000554028 BARHL2Q9NY43 387 aa12.04□□□□□ -0.48
TMEM55B-205ENST00000554028 VPS54Q9P1Q0 977 aa12.04□□□□□ -0.48
TMEM55B-205ENST00000554028 PRR12Q9ULL5 1215 aa12.04□□□□□ -0.48
TMEM55B-205ENST00000554028 ZDHHC9Q9Y397 364 aa12.04□□□□□ -0.48
TMEM55B-205ENST00000554028 ZBED4O75132 1171 aa12.03□□□□□ -0.48
TMEM55B-205ENST00000554028 FLOT1O75955 427 aa12.03□□□□□ -0.48
TMEM55B-205ENST00000554028 CD44P16070 742 aaKnown RBP12.03□□□□□ -0.48
TMEM55B-205ENST00000554028 KRT2P35908 639 aa12.03□□□□□ -0.48
TMEM55B-205ENST00000554028 FMR1Q06787 632 aaKnown RBP eCLIP12.03□□□□□ -0.48
TMEM55B-205ENST00000554028 PABPC4Q13310 644 aaKnown RBP eCLIP12.03□□□□□ -0.48
TMEM55B-205ENST00000554028 SNAPC2Q13487 334 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms