RNA–Protein interactions for RNA: ENST00000554026.5

IFT43-206, Transcript of intraflagellar transport 43, humanhuman

TSL 2

Gene IFT43, Length 1,102 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-206ENST00000554026 ATP2A1O14983 1001 aa13.16□□□□□ -0.3
IFT43-206ENST00000554026 FMNL1O95466 1100 aaPredicted RBP13.16□□□□□ -0.3
IFT43-206ENST00000554026 SLC25A27O95847 323 aa13.16□□□□□ -0.3
IFT43-206ENST00000554026 CASTP20810 708 aaKnown RBP13.16□□□□□ -0.3
IFT43-206ENST00000554026 GNAQP50148 359 aa13.16□□□□□ -0.3
IFT43-206ENST00000554026 RCAN1P53805 252 aa13.16□□□□□ -0.3
IFT43-206ENST00000554026 TRAF1Q13077 416 aa13.16□□□□□ -0.3
IFT43-206ENST00000554026 ADCK5Q3MIX3 580 aa13.16□□□□□ -0.3
IFT43-206ENST00000554026 KCTD1Q719H9 257 aa13.16□□□□□ -0.3
IFT43-206ENST00000554026 CHST3Q7LGC8 479 aa13.16□□□□□ -0.3
IFT43-206ENST00000554026 SGMS1Q86VZ5 419 aa13.16□□□□□ -0.3
IFT43-206ENST00000554026 SHCBP1Q8NEM2 672 aa13.16□□□□□ -0.3
IFT43-206ENST00000554026 NKX2-3Q8TAU0 364 aa13.16□□□□□ -0.3
IFT43-206ENST00000554026 KIFC2Q96AC6 838 aa13.16□□□□□ -0.3
IFT43-206ENST00000554026 COA7Q96BR5 231 aa13.16□□□□□ -0.3
IFT43-206ENST00000554026 ATG4CQ96DT6 458 aa13.16□□□□□ -0.3
IFT43-206ENST00000554026 MROH8Q9H579 483 aa13.16□□□□□ -0.3
IFT43-206ENST00000554026 EFCC1Q9HA90 598 aa13.16□□□□□ -0.3
IFT43-206ENST00000554026 LY9Q9HBG7 655 aa13.16□□□□□ -0.3
IFT43-206ENST00000554026 CWC22Q9HCG8 908 aaKnown RBP13.16□□□□□ -0.3
IFT43-206ENST00000554026 ZSWIM6Q9HCJ5 1215 aa13.16□□□□□ -0.3
IFT43-206ENST00000554026 MTMR7Q9Y216 660 aa13.16□□□□□ -0.3
IFT43-206ENST00000554026 SLC12A7Q9Y666 1083 aa13.16□□□□□ -0.3
IFT43-206ENST00000554026 CYP46A1Q9Y6A2 500 aa13.16□□□□□ -0.3
IFT43-206ENST00000554026 TNPO2O14787 897 aaKnown RBP13.15□□□□□ -0.3
IFT43-206ENST00000554026 RPS6KB1P23443 525 aa13.15□□□□□ -0.3
IFT43-206ENST00000554026 PSMC4P43686 418 aa13.15□□□□□ -0.3
IFT43-206ENST00000554026 PPP2R5BQ15173 497 aa13.15□□□□□ -0.3
IFT43-206ENST00000554026 SYDE2Q5VT97 1194 aa13.15□□□□□ -0.3
IFT43-206ENST00000554026 RUFY3Q7L099 469 aa13.15□□□□□ -0.3
IFT43-206ENST00000554026 CTCFLQ8NI51 663 aaPredicted RBP13.15□□□□□ -0.3
IFT43-206ENST00000554026 CD99L2Q8TCZ2 262 aa13.15□□□□□ -0.3
IFT43-206ENST00000554026 IL17RAQ96F46 866 aa13.15□□□□□ -0.3
IFT43-206ENST00000554026 LZTS2Q9BRK4 669 aa13.15□□□□□ -0.3
IFT43-206ENST00000554026 TEX13BQ9BXU2 312 aa13.15□□□□□ -0.3
IFT43-206ENST00000554026 SPATC1LQ9H0A9 340 aa13.15□□□□□ -0.3
IFT43-206ENST00000554026 SLC38A10Q9HBR0 1119 aa13.15□□□□□ -0.3
IFT43-206ENST00000554026 FBXO28Q9NVF7 368 aa13.15□□□□□ -0.3
IFT43-206ENST00000554026 PARP14Q460N5 1801 aa13.15□□□□□ -0.3
IFT43-206ENST00000554026 RLFQ13129 1914 aa13.15□□□□□ -0.3
IFT43-206ENST00000554026 A0A0G2JMZ2 1700 aa13.14□□□□□ -0.31
IFT43-206ENST00000554026 STRNO43815 780 aa13.14□□□□□ -0.31
IFT43-206ENST00000554026 SMARCA1P28370 1054 aa13.14□□□□□ -0.31
IFT43-206ENST00000554026 STAT3P40763 770 aa13.14□□□□□ -0.31
IFT43-206ENST00000554026 TROAPQ12815 778 aa13.14□□□□□ -0.31
IFT43-206ENST00000554026 PLS1Q14651 629 aa13.14□□□□□ -0.31
IFT43-206ENST00000554026 GRM4Q14833 912 aa13.14□□□□□ -0.31
IFT43-206ENST00000554026 TKFCQ3LXA3 575 aa13.14□□□□□ -0.31
IFT43-206ENST00000554026 SAMD1Q6SPF0 538 aaPredicted RBP13.14□□□□□ -0.31
IFT43-206ENST00000554026 RIOX2Q8IUF8 465 aa13.14□□□□□ -0.31
IFT43-206ENST00000554026 ZNF654Q8IZM8 581 aa13.14□□□□□ -0.31
IFT43-206ENST00000554026 SOCS4Q8WXH5 440 aa13.14□□□□□ -0.31
IFT43-206ENST00000554026 TXNRD2Q9NNW7 524 aa13.14□□□□□ -0.31
IFT43-206ENST00000554026 GPCPD1Q9NPB8 672 aa13.14□□□□□ -0.31
IFT43-206ENST00000554026 BTBD7Q9P203 1132 aa13.14□□□□□ -0.31
IFT43-206ENST00000554026 FBXO40Q9UH90 709 aa13.14□□□□□ -0.31
IFT43-206ENST00000554026 PRR12Q9ULL5 1215 aa13.14□□□□□ -0.31
IFT43-206ENST00000554026 IVNS1ABPQ9Y6Y0 642 aa13.14□□□□□ -0.31
IFT43-206ENST00000554026 FRMPD2Q68DX3 1309 aaPredicted RBP13.13□□□□□ -0.31
IFT43-206ENST00000554026 KLRF2D3W0D1 207 aa13.13□□□□□ -0.31
IFT43-206ENST00000554026 CNMDO75829 334 aa13.13□□□□□ -0.31
IFT43-206ENST00000554026 TMEM132BQ14DG7 1078 aa13.13□□□□□ -0.31
IFT43-206ENST00000554026 ANKRD1Q15327 319 aa13.13□□□□□ -0.31
IFT43-206ENST00000554026 OTOP1Q7RTM1 612 aa13.13□□□□□ -0.31
IFT43-206ENST00000554026 ABRAQ8N0Z2 381 aa13.13□□□□□ -0.31
IFT43-206ENST00000554026 AGXT2Q9BYV1 514 aa13.13□□□□□ -0.31
IFT43-206ENST00000554026 MAF1Q9H063 256 aa13.13□□□□□ -0.31
IFT43-206ENST00000554026 SLC5A4Q9NY91 659 aa13.13□□□□□ -0.31
IFT43-206ENST00000554026 ZNF214Q9UL59 606 aaPredicted RBP13.13□□□□□ -0.31
IFT43-206ENST00000554026 TRIM17Q9Y577 477 aa13.13□□□□□ -0.31
IFT43-206ENST00000554026 CCDC196A0A1B0GTZ2 297 aa13.12□□□□□ -0.31
IFT43-206ENST00000554026 PALM3A6NDB9 673 aaPredicted RBP13.12□□□□□ -0.31
IFT43-206ENST00000554026 ZBTB43O43298 467 aa13.12□□□□□ -0.31
IFT43-206ENST00000554026 DHX16O60231 1041 aaKnown RBP13.12□□□□□ -0.31
IFT43-206ENST00000554026 SEC24BO95487 1268 aa13.12□□□□□ -0.31
IFT43-206ENST00000554026 FBXO46Q6PJ61 603 aaPredicted RBP13.12□□□□□ -0.31
IFT43-206ENST00000554026 APOA5Q6Q788 366 aa13.12□□□□□ -0.31
IFT43-206ENST00000554026 Q6ZUG5 572 aa13.12□□□□□ -0.31
IFT43-206ENST00000554026 PLEKHH3Q7Z736 793 aa13.12□□□□□ -0.31
IFT43-206ENST00000554026 CHST13Q8NET6 341 aa13.12□□□□□ -0.31
IFT43-206ENST00000554026 REPS2Q8NFH8 660 aa13.12□□□□□ -0.31
IFT43-206ENST00000554026 NUP133Q8WUM0 1156 aa13.12□□□□□ -0.31
IFT43-206ENST00000554026 TRIM47Q96LD4 638 aa13.12□□□□□ -0.31
IFT43-206ENST00000554026 MOV10L1Q9BXT6 1211 aaKnown RBP13.12□□□□□ -0.31
IFT43-206ENST00000554026 ALDH8A1Q9H2A2 487 aaPredicted RBP13.12□□□□□ -0.31
IFT43-206ENST00000554026 RANBP17Q9H2T7 1088 aaKnown RBP13.12□□□□□ -0.31
IFT43-206ENST00000554026 RBM28Q9NW13 759 aaKnown RBP13.12□□□□□ -0.31
IFT43-206ENST00000554026 SRRDQ9UH36 339 aa13.12□□□□□ -0.31
IFT43-206ENST00000554026 MAD2L2Q9UI95 211 aa13.12□□□□□ -0.31
IFT43-206ENST00000554026 MGAMO43451 1857 aa13.11□□□□□ -0.31
IFT43-206ENST00000554026 SLC15A5A6NIM6 579 aa13.11□□□□□ -0.31
IFT43-206ENST00000554026 ICAM1P05362 532 aa13.11□□□□□ -0.31
IFT43-206ENST00000554026 GOLGA8HP0CJ92 632 aa13.11□□□□□ -0.31
IFT43-206ENST00000554026 SLC16A2P36021 539 aa13.11□□□□□ -0.31
IFT43-206ENST00000554026 RBM25P49756 843 aaKnown RBP13.11□□□□□ -0.31
IFT43-206ENST00000554026 IRF5Q13568 498 aa13.11□□□□□ -0.31
IFT43-206ENST00000554026 Q3C1V9 767 aa13.11□□□□□ -0.31
IFT43-206ENST00000554026 WDR78Q5VTH9 848 aa13.11□□□□□ -0.31
IFT43-206ENST00000554026 SNRNP48Q6IEG0 339 aaKnown RBP13.11□□□□□ -0.31
IFT43-206ENST00000554026 TTBK2Q6IQ55 1244 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms