RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 GNAQP50148 359 aa14.25□□□□□ -0.13
SHMT2-209ENST00000553949 HERVK_113P62684 666 aa14.25□□□□□ -0.13
SHMT2-209ENST00000553949 MAP2K1Q02750 393 aaPredicted RBP14.25□□□□□ -0.13
SHMT2-209ENST00000553949 PPP2R5BQ15173 497 aa14.25□□□□□ -0.13
SHMT2-209ENST00000553949 TAF1CQ15572 869 aaPredicted RBP14.25□□□□□ -0.13
SHMT2-209ENST00000553949 SYDE2Q5VT97 1194 aa14.25□□□□□ -0.13
SHMT2-209ENST00000553949 PRPF38AQ8NAV1 312 aaKnown RBP14.25□□□□□ -0.13
SHMT2-209ENST00000553949 SMCR8Q8TEV9 937 aaPredicted RBP14.25□□□□□ -0.13
SHMT2-209ENST00000553949 LZTS2Q9BRK4 669 aa14.25□□□□□ -0.13
SHMT2-209ENST00000553949 UBA5Q9GZZ9 404 aa14.25□□□□□ -0.13
SHMT2-209ENST00000553949 CPVLQ9H3G5 476 aa14.25□□□□□ -0.13
SHMT2-209ENST00000553949 ZFYVE28Q9HCC9 887 aa14.25□□□□□ -0.13
SHMT2-209ENST00000553949 FAM217BQ9NTX9 383 aaPredicted RBP14.25□□□□□ -0.13
SHMT2-209ENST00000553949 RNF186Q9NXI6 227 aa14.25□□□□□ -0.13
SHMT2-209ENST00000553949 PRR12Q9ULL5 1215 aa14.25□□□□□ -0.13
SHMT2-209ENST00000553949 ADAMTS5Q9UNA0 930 aa14.25□□□□□ -0.13
SHMT2-209ENST00000553949 CCDC196A0A1B0GTZ2 297 aa14.24□□□□□ -0.13
SHMT2-209ENST00000553949 CA12O43570 354 aa14.24□□□□□ -0.13
SHMT2-209ENST00000553949 PFKFB2O60825 505 aa14.24□□□□□ -0.13
SHMT2-209ENST00000553949 PLEKHA8P1O95397 391 aa14.24□□□□□ -0.13
SHMT2-209ENST00000553949 CD2BP2O95400 341 aaKnown RBP14.24□□□□□ -0.13
SHMT2-209ENST00000553949 CDC27P30260 824 aa14.24□□□□□ -0.13
SHMT2-209ENST00000553949 MCM2P49736 904 aa14.24□□□□□ -0.13
SHMT2-209ENST00000553949 CCT2P78371 535 aaKnown RBP14.24□□□□□ -0.13
SHMT2-209ENST00000553949 STK3Q13188 491 aa14.24□□□□□ -0.13
SHMT2-209ENST00000553949 CRHR2Q13324 411 aa14.24□□□□□ -0.13
SHMT2-209ENST00000553949 ME3Q16798 604 aa14.24□□□□□ -0.13
SHMT2-209ENST00000553949 POTEEQ6S8J3 1075 aa14.24□□□□□ -0.13
SHMT2-209ENST00000553949 LBX2Q6XYB7 198 aa14.24□□□□□ -0.13
SHMT2-209ENST00000553949 TMTC3Q6ZXV5 915 aa14.24□□□□□ -0.13
SHMT2-209ENST00000553949 NBPF11Q86T75 865 aa14.24□□□□□ -0.13
SHMT2-209ENST00000553949 ATG4CQ96DT6 458 aa14.24□□□□□ -0.13
SHMT2-209ENST00000553949 SLKQ9H2G2 1235 aaPredicted RBP14.24□□□□□ -0.13
SHMT2-209ENST00000553949 ADGRA2Q96PE1 1338 aa14.23□□□□□ -0.13
SHMT2-209ENST00000553949 VWA5AO00534 786 aa14.23□□□□□ -0.13
SHMT2-209ENST00000553949 DHX16O60231 1041 aaKnown RBP14.23□□□□□ -0.13
SHMT2-209ENST00000553949 TRPA1O75762 1119 aa14.23□□□□□ -0.13
SHMT2-209ENST00000553949 LARGE1O95461 756 aa14.23□□□□□ -0.13
SHMT2-209ENST00000553949 ADD1P35611 737 aaKnown RBP14.23□□□□□ -0.13
SHMT2-209ENST00000553949 GCLCP48506 637 aaPredicted RBP14.23□□□□□ -0.13
SHMT2-209ENST00000553949 SCRN1Q12765 414 aa14.23□□□□□ -0.13
SHMT2-209ENST00000553949 SLC35G1Q2M3R5 365 aa14.23□□□□□ -0.13
SHMT2-209ENST00000553949 ADGRF4Q8IZF3 695 aa14.23□□□□□ -0.13
SHMT2-209ENST00000553949 CMTR1Q8N1G2 835 aaKnown RBP14.23□□□□□ -0.13
SHMT2-209ENST00000553949 SRBD1Q8N5C6 995 aaKnown RBP14.23□□□□□ -0.13
SHMT2-209ENST00000553949 GTF3C2Q8WUA4 911 aaPredicted RBP14.23□□□□□ -0.13
SHMT2-209ENST00000553949 ZSCAN31Q96LW9 406 aaPredicted RBP14.23□□□□□ -0.13
SHMT2-209ENST00000553949 JMJD4Q9H9V9 463 aa14.23□□□□□ -0.13
SHMT2-209ENST00000553949 SLC38A10Q9HBR0 1119 aa14.23□□□□□ -0.13
SHMT2-209ENST00000553949 NCOA5Q9HCD5 579 aaKnown RBP14.23□□□□□ -0.13
SHMT2-209ENST00000553949 CYTH3O43739 400 aa14.22□□□□□ -0.13
SHMT2-209ENST00000553949 TLR2O60603 784 aa14.22□□□□□ -0.13
SHMT2-209ENST00000553949 ZBED4O75132 1171 aa14.22□□□□□ -0.13
SHMT2-209ENST00000553949 FDX1P10109 184 aa14.22□□□□□ -0.13
SHMT2-209ENST00000553949 SMARCA1P28370 1054 aa14.22□□□□□ -0.13
SHMT2-209ENST00000553949 SNAP25P60880 206 aa14.22□□□□□ -0.13
SHMT2-209ENST00000553949 MB21D1Q8N884 522 aa14.22□□□□□ -0.13
SHMT2-209ENST00000553949 NECAB1Q8N987 351 aa14.22□□□□□ -0.13
SHMT2-209ENST00000553949 JMYQ8N9B5 988 aa14.22□□□□□ -0.13
SHMT2-209ENST00000553949 REPS2Q8NFH8 660 aa14.22□□□□□ -0.13
SHMT2-209ENST00000553949 GTF3C6Q969F1 213 aa14.22□□□□□ -0.13
SHMT2-209ENST00000553949 BEGAINQ9BUH8 593 aa14.22□□□□□ -0.13
SHMT2-209ENST00000553949 SPZ1Q9BXG8 430 aa14.22□□□□□ -0.13
SHMT2-209ENST00000553949 CFHR5Q9BXR6 569 aa14.22□□□□□ -0.13
SHMT2-209ENST00000553949 RANBP17Q9H2T7 1088 aaKnown RBP14.22□□□□□ -0.13
SHMT2-209ENST00000553949 R3HDMLQ9H3Y0 253 aa14.22□□□□□ -0.13
SHMT2-209ENST00000553949 RIOX1Q9H6W3 641 aa14.22□□□□□ -0.13
SHMT2-209ENST00000553949 VAT1LQ9HCJ6 419 aa14.22□□□□□ -0.13
SHMT2-209ENST00000553949 SH2B1Q9NRF2 756 aaPredicted RBP14.22□□□□□ -0.13
SHMT2-209ENST00000553949 SAGE1Q9NXZ1 904 aa14.22□□□□□ -0.13
SHMT2-209ENST00000553949 RBPJLQ9UBG7 517 aa14.22□□□□□ -0.13
SHMT2-209ENST00000553949 PCNTO95613 3336 aa14.21□□□□□ -0.13
SHMT2-209ENST00000553949 PEX10O60683 326 aa14.21□□□□□ -0.13
SHMT2-209ENST00000553949 CNMDO75829 334 aa14.21□□□□□ -0.13
SHMT2-209ENST00000553949 TBC1D8O95759 1140 aa14.21□□□□□ -0.13
SHMT2-209ENST00000553949 FUT2Q10981 343 aa14.21□□□□□ -0.13
SHMT2-209ENST00000553949 TMEM132BQ14DG7 1078 aa14.21□□□□□ -0.13
SHMT2-209ENST00000553949 CCDC82Q8N4S0 544 aa14.21□□□□□ -0.13
SHMT2-209ENST00000553949 ANKRD13CQ8N6S4 541 aa14.21□□□□□ -0.13
SHMT2-209ENST00000553949 MTMR8Q96EF0 704 aa14.21□□□□□ -0.13
SHMT2-209ENST00000553949 PAGR1Q9BTK6 254 aa14.21□□□□□ -0.13
SHMT2-209ENST00000553949 TXNRD2Q9NNW7 524 aa14.21□□□□□ -0.13
SHMT2-209ENST00000553949 WBP1LQ9NX94 342 aa14.21□□□□□ -0.13
SHMT2-209ENST00000553949 BTBD7Q9P203 1132 aa14.21□□□□□ -0.13
SHMT2-209ENST00000553949 CPA4Q9UI42 421 aa14.21□□□□□ -0.13
SHMT2-209ENST00000553949 RABGAP1Q9Y3P9 1069 aa14.21□□□□□ -0.13
SHMT2-209ENST00000553949 CTDP1Q9Y5B0 961 aaPredicted RBP14.21□□□□□ -0.13
SHMT2-209ENST00000553949 CPLX1O14810 134 aa14.2□□□□□ -0.14
SHMT2-209ENST00000553949 BCRP11274 1271 aa14.2□□□□□ -0.14
SHMT2-209ENST00000553949 OAZ1P54368 228 aa14.2□□□□□ -0.14
SHMT2-209ENST00000553949 ST3GAL1Q11201 340 aa14.2□□□□□ -0.14
SHMT2-209ENST00000553949 NTRK3Q16288 839 aa14.2□□□□□ -0.14
SHMT2-209ENST00000553949 CDC37Q16543 378 aaPredicted RBP14.2□□□□□ -0.14
SHMT2-209ENST00000553949 CCDC174Q6PII3 467 aa14.2□□□□□ -0.14
SHMT2-209ENST00000553949 C17orf99Q6UX52 265 aa14.2□□□□□ -0.14
SHMT2-209ENST00000553949 GPRC5AQ8NFJ5 357 aa14.2□□□□□ -0.14
SHMT2-209ENST00000553949 SNX21Q969T3 373 aa14.2□□□□□ -0.14
SHMT2-209ENST00000553949 TMX3Q96JJ7 454 aa14.2□□□□□ -0.14
SHMT2-209ENST00000553949 PIGSQ96S52 555 aa14.2□□□□□ -0.14
SHMT2-209ENST00000553949 MORF4L1Q9UBU8 362 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms