RNA–Protein interactions for RNA: ENST00000553807.1

XRCC3-205, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-205ENST00000553807 SLC4A3P48751 1232 aa24.04■■□□□ 1.44
XRCC3-205ENST00000553807 SNRNP48Q6IEG0 339 aaKnown RBP24.04■■□□□ 1.44
XRCC3-205ENST00000553807 RIOX2Q8IUF8 465 aa24.04■■□□□ 1.44
XRCC3-205ENST00000553807 TEX13BQ9BXU2 312 aa24.04■■□□□ 1.44
XRCC3-205ENST00000553807 KRT23Q9C075 422 aa24.04■■□□□ 1.44
XRCC3-205ENST00000553807 RCSD1Q6JBY9 416 aa24.03■■□□□ 1.44
XRCC3-205ENST00000553807 IQCA1Q86XH1 822 aa24.03■■□□□ 1.44
XRCC3-205ENST00000553807 TRMT44Q8IYL2 757 aaKnown RBP24.03■■□□□ 1.44
XRCC3-205ENST00000553807 CPXCR1Q8N123 301 aa24.03■■□□□ 1.44
XRCC3-205ENST00000553807 DCAF4Q8WV16 495 aa24.03■■□□□ 1.44
XRCC3-205ENST00000553807 CNNM2Q9H8M5 875 aa24.03■■□□□ 1.44
XRCC3-205ENST00000553807 STRNO43815 780 aa24.02■■□□□ 1.44
XRCC3-205ENST00000553807 GJB1P08034 283 aa24.02■■□□□ 1.44
XRCC3-205ENST00000553807 PRKAR2AP13861 404 aaKnown RBP24.02■■□□□ 1.44
XRCC3-205ENST00000553807 NT5C2P49902 561 aa24.02■■□□□ 1.44
XRCC3-205ENST00000553807 KIAA1211Q6ZU35 1233 aa24.02■■□□□ 1.44
XRCC3-205ENST00000553807 DPP9Q86TI2 863 aa24.02■■□□□ 1.44
XRCC3-205ENST00000553807 FAM160B2Q86V87 743 aa24.02■■□□□ 1.44
XRCC3-205ENST00000553807 CHURC1Q8WUH1 139 aa24.02■■□□□ 1.44
XRCC3-205ENST00000553807 ESYT1Q9BSJ8 1104 aa24.02■■□□□ 1.44
XRCC3-205ENST00000553807 SLC38A10Q9HBR0 1119 aa24.02■■□□□ 1.44
XRCC3-205ENST00000553807 RAVER2Q9HCJ3 691 aaKnown RBP24.02■■□□□ 1.44
XRCC3-205ENST00000553807 CYP21A2P08686 494 aa24.01■■□□□ 1.43
XRCC3-205ENST00000553807 FCER1AP12319 257 aa24.01■■□□□ 1.43
XRCC3-205ENST00000553807 COPB2P35606 906 aa24.01■■□□□ 1.43
XRCC3-205ENST00000553807 NPLOC4Q8TAT6 608 aa24.01■■□□□ 1.43
XRCC3-205ENST00000553807 SHISA4Q96DD7 197 aa24.01■■□□□ 1.43
XRCC3-205ENST00000553807 TTC14Q96N46 770 aa24.01■■□□□ 1.43
XRCC3-205ENST00000553807 MMP19Q99542 508 aa24.01■■□□□ 1.43
XRCC3-205ENST00000553807 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.01■■□□□ 1.43
XRCC3-205ENST00000553807 RBM8AQ9Y5S9 174 aaKnown RBP24.01■■□□□ 1.43
XRCC3-205ENST00000553807 FRMPD2Q68DX3 1309 aaPredicted RBP24.01■■□□□ 1.43
XRCC3-205ENST00000553807 U2AF1L4Q8WU68 220 aaKnown RBP24■■□□□ 1.43
XRCC3-205ENST00000553807 DEFB118Q96PH6 123 aa24■■□□□ 1.43
XRCC3-205ENST00000553807 ZSCAN10Q96SZ4 725 aaPredicted RBP24■■□□□ 1.43
XRCC3-205ENST00000553807 UBAC1Q9BSL1 405 aa24■■□□□ 1.43
XRCC3-205ENST00000553807 FLRT1Q9NZU1 646 aa24■■□□□ 1.43
XRCC3-205ENST00000553807 ZSWIM5Q9P217 1185 aa24■■□□□ 1.43
XRCC3-205ENST00000553807 TNKSO95271 1327 aa24■■□□□ 1.43
XRCC3-205ENST00000553807 HOXC6P09630 235 aa23.99■■□□□ 1.43
XRCC3-205ENST00000553807 GJA8P48165 433 aa23.99■■□□□ 1.43
XRCC3-205ENST00000553807 TRDNQ13061 729 aa23.99■■□□□ 1.43
XRCC3-205ENST00000553807 KCTD2Q14681 263 aa23.99■■□□□ 1.43
XRCC3-205ENST00000553807 CCDC178Q5BJE1 867 aa23.99■■□□□ 1.43
XRCC3-205ENST00000553807 DGKHQ86XP1 1220 aa23.99■■□□□ 1.43
XRCC3-205ENST00000553807 ABRAQ8N0Z2 381 aa23.99■■□□□ 1.43
XRCC3-205ENST00000553807 MAP4K1Q92918 833 aa23.99■■□□□ 1.43
XRCC3-205ENST00000553807 HMX1Q9NP08 348 aaPredicted RBP23.99■■□□□ 1.43
XRCC3-205ENST00000553807 GPCPD1Q9NPB8 672 aa23.99■■□□□ 1.43
XRCC3-205ENST00000553807 ANO2Q9NQ90 1003 aa23.99■■□□□ 1.43
XRCC3-205ENST00000553807 PAK6Q9NQU5 681 aaPredicted RBP23.99■■□□□ 1.43
XRCC3-205ENST00000553807 RIPK3Q9Y572 518 aa23.99■■□□□ 1.43
XRCC3-205ENST00000553807 TAF6LQ9Y6J9 622 aa23.99■■□□□ 1.43
XRCC3-205ENST00000553807 TNRC18O15417 2968 aaPredicted RBP23.99■■□□□ 1.43
XRCC3-205ENST00000553807 COBLO75128 1261 aa23.98■■□□□ 1.43
XRCC3-205ENST00000553807 CDC45O75419 566 aa23.98■■□□□ 1.43
XRCC3-205ENST00000553807 PDHBP11177 359 aa23.98■■□□□ 1.43
XRCC3-205ENST00000553807 SNAP25P60880 206 aa23.98■■□□□ 1.43
XRCC3-205ENST00000553807 MAP3K21Q5TCX8 1036 aa23.98■■□□□ 1.43
XRCC3-205ENST00000553807 MFSD14CQ5VZR4 134 aa23.98■■□□□ 1.43
XRCC3-205ENST00000553807 TTBK2Q6IQ55 1244 aa23.98■■□□□ 1.43
XRCC3-205ENST00000553807 ENAHQ8N8S7 591 aaPredicted RBP23.98■■□□□ 1.43
XRCC3-205ENST00000553807 LSG1Q9H089 658 aaKnown RBP23.98■■□□□ 1.43
XRCC3-205ENST00000553807 KAT14Q9H8E8 782 aa23.98■■□□□ 1.43
XRCC3-205ENST00000553807 PRR12Q9ULL5 1215 aa23.98■■□□□ 1.43
XRCC3-205ENST00000553807 RPTORQ8N122 1335 aa23.98■■□□□ 1.43
XRCC3-205ENST00000553807 ATP2A1O14983 1001 aa23.97■■□□□ 1.43
XRCC3-205ENST00000553807 PLA2G6O60733 806 aa23.97■■□□□ 1.43
XRCC3-205ENST00000553807 PGK2P07205 417 aa23.97■■□□□ 1.43
XRCC3-205ENST00000553807 SLC16A2P36021 539 aa23.97■■□□□ 1.43
XRCC3-205ENST00000553807 OAZ1P54368 228 aa23.97■■□□□ 1.43
XRCC3-205ENST00000553807 CACNB2Q08289 660 aaPredicted RBP23.97■■□□□ 1.43
XRCC3-205ENST00000553807 CCDC174Q6PII3 467 aa23.97■■□□□ 1.43
XRCC3-205ENST00000553807 CASC1Q6TDU7 716 aa23.97■■□□□ 1.43
XRCC3-205ENST00000553807 RALYLQ86SE5 291 aaKnown RBP23.97■■□□□ 1.43
XRCC3-205ENST00000553807 PNMA1Q8ND90 353 aa23.97■■□□□ 1.43
XRCC3-205ENST00000553807 HOMER2Q9NSB8 354 aa23.97■■□□□ 1.43
XRCC3-205ENST00000553807 PPP4R2Q9NY27 417 aa23.97■■□□□ 1.43
XRCC3-205ENST00000553807 SLC5A4Q9NY91 659 aa23.97■■□□□ 1.43
XRCC3-205ENST00000553807 E7EWF7 191 aa23.96■■□□□ 1.43
XRCC3-205ENST00000553807 SGPL1O95470 568 aa23.96■■□□□ 1.43
XRCC3-205ENST00000553807 FDX1P10109 184 aa23.96■■□□□ 1.43
XRCC3-205ENST00000553807 CYB5R4Q7L1T6 521 aa23.96■■□□□ 1.43
XRCC3-205ENST00000553807 CCND3P30281 292 aaPredicted RBP23.95■■□□□ 1.42
XRCC3-205ENST00000553807 CYP2C19P33261 490 aa23.95■■□□□ 1.42
XRCC3-205ENST00000553807 ZNF543Q08ER8 600 aa23.95■■□□□ 1.42
XRCC3-205ENST00000553807 SYDE2Q5VT97 1194 aa23.95■■□□□ 1.42
XRCC3-205ENST00000553807 STOX1Q6ZVD7 989 aa23.95■■□□□ 1.42
XRCC3-205ENST00000553807 AGBL1Q96MI9 1066 aa23.95■■□□□ 1.42
XRCC3-205ENST00000553807 MKI67P46013 3256 aaKnown RBP23.94■■□□□ 1.42
XRCC3-205ENST00000553807 TFRCP02786 760 aaKnown RBP23.94■■□□□ 1.42
XRCC3-205ENST00000553807 IFIT1BQ5T764 474 aaKnown RBP23.94■■□□□ 1.42
XRCC3-205ENST00000553807 NCOA7Q8NI08 942 aa23.94■■□□□ 1.42
XRCC3-205ENST00000553807 ANKS1AQ92625 1134 aa23.94■■□□□ 1.42
XRCC3-205ENST00000553807 ZNF536O15090 1300 aa23.93■■□□□ 1.42
XRCC3-205ENST00000553807 GOLGA8HP0CJ92 632 aa23.93■■□□□ 1.42
XRCC3-205ENST00000553807 SNHG28P0DPA3 235 aa23.93■■□□□ 1.42
XRCC3-205ENST00000553807 ERICH6BQ5W0A0 696 aa23.93■■□□□ 1.42
XRCC3-205ENST00000553807 OLFML2BQ68BL8 750 aa23.93■■□□□ 1.42
XRCC3-205ENST00000553807 BTNL9Q6UXG8 535 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms