RNA–Protein interactions for RNA: ENST00000553747.5

LINC00648-201, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 280 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-201ENST00000553747 LRRN2O75325 713 aa5.44□□□□□ -1.54
LINC00648-201ENST00000553747 FANCCQ00597 558 aa5.44□□□□□ -1.54
LINC00648-201ENST00000553747 KRTAP1-1Q07627 177 aa5.44□□□□□ -1.54
LINC00648-201ENST00000553747 NR0B2Q15466 257 aa5.44□□□□□ -1.54
LINC00648-201ENST00000553747 ADGRF1Q5T601 910 aa5.44□□□□□ -1.54
LINC00648-201ENST00000553747 REXO1Q8N1G1 1221 aaKnown RBP5.44□□□□□ -1.54
LINC00648-201ENST00000553747 DHX38Q92620 1227 aaKnown RBP5.44□□□□□ -1.54
LINC00648-201ENST00000553747 RNF34Q969K3 372 aa5.44□□□□□ -1.54
LINC00648-201ENST00000553747 ASPNQ9BXN1 380 aa5.44□□□□□ -1.54
LINC00648-201ENST00000553747 GPR62Q9BZJ7 368 aa5.44□□□□□ -1.54
LINC00648-201ENST00000553747 EHMT1Q9H9B1 1298 aa5.44□□□□□ -1.54
LINC00648-201ENST00000553747 INSRRP14616 1297 aa5.43□□□□□ -1.54
LINC00648-201ENST00000553747 SDHBP21912 280 aa5.43□□□□□ -1.54
LINC00648-201ENST00000553747 CLCQ05315 142 aa5.43□□□□□ -1.54
LINC00648-201ENST00000553747 CLEC16AQ2KHT3 1053 aa5.43□□□□□ -1.54
LINC00648-201ENST00000553747 LRRFIP1Q32MZ4 808 aaKnown RBP5.43□□□□□ -1.54
LINC00648-201ENST00000553747 ZNF428Q96B54 188 aa5.43□□□□□ -1.54
LINC00648-201ENST00000553747 ASCC2Q9H1I8 757 aaPredicted RBP5.43□□□□□ -1.54
LINC00648-201ENST00000553747 OR14I1A6ND48 311 aa5.42□□□□□ -1.54
LINC00648-201ENST00000553747 VAMP1P23763 118 aa5.42□□□□□ -1.54
LINC00648-201ENST00000553747 RBM25P49756 843 aaKnown RBP5.42□□□□□ -1.54
LINC00648-201ENST00000553747 RNF4P78317 190 aa5.42□□□□□ -1.54
LINC00648-201ENST00000553747 ZXDCQ2QGD7 858 aaPredicted RBP5.42□□□□□ -1.54
LINC00648-201ENST00000553747 ZNF394Q53GI3 561 aa5.42□□□□□ -1.54
LINC00648-201ENST00000553747 CDCP2Q5VXM1 449 aa5.42□□□□□ -1.54
LINC00648-201ENST00000553747 OVOS1Q6IE37 1185 aa5.42□□□□□ -1.54
LINC00648-201ENST00000553747 SPPL2CQ8IUH8 684 aa5.42□□□□□ -1.54
LINC00648-201ENST00000553747 SLITRK4Q8IW52 837 aa5.42□□□□□ -1.54
LINC00648-201ENST00000553747 SYTL4Q96C24 671 aaPredicted RBP5.42□□□□□ -1.54
LINC00648-201ENST00000553747 EAF1Q96JC9 268 aaPredicted RBP5.42□□□□□ -1.54
LINC00648-201ENST00000553747 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.42□□□□□ -1.54
LINC00648-201ENST00000553747 SIRT5Q9NXA8 310 aa5.42□□□□□ -1.54
LINC00648-201ENST00000553747 NOTOA8MTQ0 251 aa5.41□□□□□ -1.54
LINC00648-201ENST00000553747 SCAMP3O14828 347 aaKnown RBP5.41□□□□□ -1.54
LINC00648-201ENST00000553747 UBOX5O94941 541 aa5.41□□□□□ -1.54
LINC00648-201ENST00000553747 TEKQ02763 1124 aa5.41□□□□□ -1.54
LINC00648-201ENST00000553747 RAD51AP2Q09MP3 1159 aa5.41□□□□□ -1.54
LINC00648-201ENST00000553747 PUM1Q14671 1186 aaKnown RBP eCLIP5.41□□□□□ -1.54
LINC00648-201ENST00000553747 NLRC3Q7RTR2 1065 aa5.41□□□□□ -1.54
LINC00648-201ENST00000553747 ATG4CQ96DT6 458 aa5.41□□□□□ -1.54
LINC00648-201ENST00000553747 CNNM2Q9H8M5 875 aa5.41□□□□□ -1.54
LINC00648-201ENST00000553747 CNTD2Q9H8S5 307 aa5.41□□□□□ -1.54
LINC00648-201ENST00000553747 PCDHGB7Q9Y5F8 929 aa5.41□□□□□ -1.54
LINC00648-201ENST00000553747 POLR2BP30876 1174 aaKnown RBP5.4□□□□□ -1.54
LINC00648-201ENST00000553747 VIPR1P32241 457 aa5.4□□□□□ -1.54
LINC00648-201ENST00000553747 CCNFP41002 786 aa5.4□□□□□ -1.54
LINC00648-201ENST00000553747 CHRNEQ04844 493 aa5.4□□□□□ -1.54
LINC00648-201ENST00000553747 PLP2Q04941 152 aa5.4□□□□□ -1.54
LINC00648-201ENST00000553747 SNX17Q15036 470 aa5.4□□□□□ -1.54
LINC00648-201ENST00000553747 NPM2Q86SE8 214 aaKnown RBP5.4□□□□□ -1.54
LINC00648-201ENST00000553747 TMEFF1Q8IYR6 380 aa5.4□□□□□ -1.54
LINC00648-201ENST00000553747 ANKS4BQ8N8V4 417 aa5.4□□□□□ -1.54
LINC00648-201ENST00000553747 BDH2Q9BUT1 245 aa5.4□□□□□ -1.54
LINC00648-201ENST00000553747 SHISA3A0PJX4 238 aa5.39□□□□□ -1.55
LINC00648-201ENST00000553747 N4BP3O15049 544 aa5.39□□□□□ -1.55
LINC00648-201ENST00000553747 CLEC3AO75596 197 aa5.39□□□□□ -1.55
LINC00648-201ENST00000553747 USP2O75604 605 aaPredicted RBP5.39□□□□□ -1.55
LINC00648-201ENST00000553747 RECKO95980 971 aa5.39□□□□□ -1.55
LINC00648-201ENST00000553747 IMPDH2P12268 514 aa5.39□□□□□ -1.55
LINC00648-201ENST00000553747 NMIQ13287 307 aaPredicted RBP5.39□□□□□ -1.55
LINC00648-201ENST00000553747 ERICH6BQ5W0A0 696 aa5.39□□□□□ -1.55
LINC00648-201ENST00000553747 NLRX1Q86UT6 975 aa5.39□□□□□ -1.55
LINC00648-201ENST00000553747 ENOX1Q8TC92 643 aaKnown RBP5.39□□□□□ -1.55
LINC00648-201ENST00000553747 VWCEQ96DN2 955 aa5.39□□□□□ -1.55
LINC00648-201ENST00000553747 MRRFQ96E11 262 aaKnown RBP5.39□□□□□ -1.55
LINC00648-201ENST00000553747 BORCS6Q96GS4 357 aa5.39□□□□□ -1.55
LINC00648-201ENST00000553747 G6PC3Q9BUM1 346 aa5.39□□□□□ -1.55
LINC00648-201ENST00000553747 ANTXR1Q9H6X2 564 aa5.39□□□□□ -1.55
LINC00648-201ENST00000553747 DDX41Q9UJV9 622 aaKnown RBP5.39□□□□□ -1.55
LINC00648-201ENST00000553747 MEIS3P2A8K0S8 358 aa5.38□□□□□ -1.55
LINC00648-201ENST00000553747 NME1P15531 152 aaKnown RBP5.38□□□□□ -1.55
LINC00648-201ENST00000553747 CDR1P51861 262 aa5.38□□□□□ -1.55
LINC00648-201ENST00000553747 DUSP4Q13115 394 aa5.38□□□□□ -1.55
LINC00648-201ENST00000553747 SPATS1Q496A3 300 aa5.38□□□□□ -1.55
LINC00648-201ENST00000553747 NBPF12Q5TAG4 269 aaPredicted RBP5.38□□□□□ -1.55
LINC00648-201ENST00000553747 FBXW10Q5XX13 1052 aa5.38□□□□□ -1.55
LINC00648-201ENST00000553747 CNKSR3Q6P9H4 555 aa5.38□□□□□ -1.55
LINC00648-201ENST00000553747 ZNF654Q8IZM8 581 aa5.38□□□□□ -1.55
LINC00648-201ENST00000553747 LINC01599Q8WXQ3 324 aa5.38□□□□□ -1.55
LINC00648-201ENST00000553747 TEPSINQ96N21 525 aa5.38□□□□□ -1.55
LINC00648-201ENST00000553747 FERD3LQ96RJ6 166 aa5.38□□□□□ -1.55
LINC00648-201ENST00000553747 UNCXA6NJT0 531 aa5.37□□□□□ -1.55
LINC00648-201ENST00000553747 PRICKLE3O43900 615 aaPredicted RBP5.37□□□□□ -1.55
LINC00648-201ENST00000553747 RACK1P63244 317 aaKnown RBP5.37□□□□□ -1.55
LINC00648-201ENST00000553747 EFEMP1Q12805 493 aa5.37□□□□□ -1.55
LINC00648-201ENST00000553747 NBPF9Q3BBW0 867 aa5.37□□□□□ -1.55
LINC00648-201ENST00000553747 SP8Q8IXZ3 490 aa5.37□□□□□ -1.55
LINC00648-201ENST00000553747 SYTL5Q8TDW5 730 aaPredicted RBP5.37□□□□□ -1.55
LINC00648-201ENST00000553747 DHRS1Q96LJ7 313 aa5.37□□□□□ -1.55
LINC00648-201ENST00000553747 SLC6A18Q96N87 628 aa5.37□□□□□ -1.55
LINC00648-201ENST00000553747 MKRN2Q9H000 416 aaKnown RBP5.37□□□□□ -1.55
LINC00648-201ENST00000553747 ZNRF3Q9ULT6 936 aa5.37□□□□□ -1.55
LINC00648-201ENST00000553747 SSU72P8A0A1W2PR75 194 aa5.36□□□□□ -1.55
LINC00648-201ENST00000553747 IRS4O14654 1257 aaPredicted RBP5.36□□□□□ -1.55
LINC00648-201ENST00000553747 TNFRSF10CO14798 259 aa5.36□□□□□ -1.55
LINC00648-201ENST00000553747 RPL10P27635 214 aaKnown RBP5.36□□□□□ -1.55
LINC00648-201ENST00000553747 RTP5Q14D33 572 aa5.36□□□□□ -1.55
LINC00648-201ENST00000553747 INTS3Q68E01 1043 aaKnown RBP5.36□□□□□ -1.55
LINC00648-201ENST00000553747 FAM129CQ86XR2 697 aa5.36□□□□□ -1.55
LINC00648-201ENST00000553747 TP53I13Q8NBR0 393 aaPredicted RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms