RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 LRP8Q14114 963 aa8.4□□□□□ -1.06
ATXN3-223ENST00000553686 LRRC14Q15048 493 aa8.4□□□□□ -1.06
ATXN3-223ENST00000553686 FBXO33Q7Z6M2 555 aa8.4□□□□□ -1.06
ATXN3-223ENST00000553686 HOMEZQ8IX15 550 aa8.4□□□□□ -1.06
ATXN3-223ENST00000553686 SHISA5Q8N114 240 aa8.4□□□□□ -1.06
ATXN3-223ENST00000553686 GIMAP7Q8NHV1 300 aa8.4□□□□□ -1.06
ATXN3-223ENST00000553686 GPBAR1Q8TDU6 330 aa8.4□□□□□ -1.06
ATXN3-223ENST00000553686 FANCD2OSQ96PS1 177 aa8.4□□□□□ -1.06
ATXN3-223ENST00000553686 SEMA6CQ9H3T2 930 aa8.4□□□□□ -1.06
ATXN3-223ENST00000553686 LGR6Q9HBX8 967 aa8.4□□□□□ -1.06
ATXN3-223ENST00000553686 DISC1Q9NRI5 854 aa8.4□□□□□ -1.06
ATXN3-223ENST00000553686 ATG3Q9NT62 314 aa8.4□□□□□ -1.06
ATXN3-223ENST00000553686 PIM2Q9P1W9 311 aa8.4□□□□□ -1.06
ATXN3-223ENST00000553686 ABCC6O95255 1503 aa8.39□□□□□ -1.07
ATXN3-223ENST00000553686 KCPQ6ZWJ8 1503 aa8.39□□□□□ -1.07
ATXN3-223ENST00000553686 PXDNLA1KZ92 1463 aa8.39□□□□□ -1.07
ATXN3-223ENST00000553686 NSD3Q9BZ95 1437 aa8.39□□□□□ -1.07
ATXN3-223ENST00000553686 PRR19A6NJB7 356 aa8.39□□□□□ -1.07
ATXN3-223ENST00000553686 F13BP05160 661 aa8.39□□□□□ -1.07
ATXN3-223ENST00000553686 CELA3AP09093 270 aa8.39□□□□□ -1.07
ATXN3-223ENST00000553686 MMP10P09238 476 aa8.39□□□□□ -1.07
ATXN3-223ENST00000553686 DPEP1P16444 411 aa8.39□□□□□ -1.07
ATXN3-223ENST00000553686 ADMP35318 185 aa8.39□□□□□ -1.07
ATXN3-223ENST00000553686 DAB2P98082 770 aa8.39□□□□□ -1.07
ATXN3-223ENST00000553686 TAGLNQ01995 201 aaKnown RBP8.39□□□□□ -1.07
ATXN3-223ENST00000553686 MAP2K1Q02750 393 aaPredicted RBP8.39□□□□□ -1.07
ATXN3-223ENST00000553686 DALRD3Q5D0E6 543 aaKnown RBP8.39□□□□□ -1.07
ATXN3-223ENST00000553686 SV2BQ7L1I2 683 aa8.39□□□□□ -1.07
ATXN3-223ENST00000553686 NLGN1Q8N2Q7 840 aa8.39□□□□□ -1.07
ATXN3-223ENST00000553686 ATXN3LQ9H3M9 355 aa8.39□□□□□ -1.07
ATXN3-223ENST00000553686 PIDD1Q9HB75 910 aa8.39□□□□□ -1.07
ATXN3-223ENST00000553686 PRKAG2Q9UGJ0 569 aa8.39□□□□□ -1.07
ATXN3-223ENST00000553686 CYP8B1Q9UNU6 501 aa8.39□□□□□ -1.07
ATXN3-223ENST00000553686 PCDHGC5Q9Y5F6 944 aa8.39□□□□□ -1.07
ATXN3-223ENST00000553686 COL24A1Q17RW2 1714 aa8.39□□□□□ -1.07
ATXN3-223ENST00000553686 NHSQ6T4R5 1651 aa8.39□□□□□ -1.07
ATXN3-223ENST00000553686 CNTNAP1P78357 1384 aa8.38□□□□□ -1.07
ATXN3-223ENST00000553686 ZC3H12AQ5D1E8 599 aaKnown RBP8.38□□□□□ -1.07
ATXN3-223ENST00000553686 RASIP1Q5U651 963 aa8.38□□□□□ -1.07
ATXN3-223ENST00000553686 LLGL2Q6P1M3 1020 aa8.38□□□□□ -1.07
ATXN3-223ENST00000553686 ZCRB1Q8TBF4 217 aaKnown RBP8.38□□□□□ -1.07
ATXN3-223ENST00000553686 SMARCC1Q92922 1105 aaPredicted RBP8.38□□□□□ -1.07
ATXN3-223ENST00000553686 FAM161BQ96MY7 647 aa8.38□□□□□ -1.07
ATXN3-223ENST00000553686 TBC1D32Q96NH3 1257 aa8.38□□□□□ -1.07
ATXN3-223ENST00000553686 DAGLAQ9Y4D2 1042 aa8.38□□□□□ -1.07
ATXN3-223ENST00000553686 SLIT3O75094 1523 aa8.38□□□□□ -1.07
ATXN3-223ENST00000553686 TTC21BQ7Z4L5 1316 aa8.37□□□□□ -1.07
ATXN3-223ENST00000553686 TTC21AQ8NDW8 1320 aa8.37□□□□□ -1.07
ATXN3-223ENST00000553686 RNGTTO60942 597 aaKnown RBP8.37□□□□□ -1.07
ATXN3-223ENST00000553686 COBLO75128 1261 aa8.37□□□□□ -1.07
ATXN3-223ENST00000553686 MED26O95402 600 aa8.37□□□□□ -1.07
ATXN3-223ENST00000553686 HSPA8P11142 646 aaKnown RBP8.37□□□□□ -1.07
ATXN3-223ENST00000553686 CCDC85BQ15834 202 aaPredicted RBP8.37□□□□□ -1.07
ATXN3-223ENST00000553686 PCNX4Q63HM2 1172 aa8.37□□□□□ -1.07
ATXN3-223ENST00000553686 ZAR1Q86SH2 424 aa8.37□□□□□ -1.07
ATXN3-223ENST00000553686 OSBPL1AQ9BXW6 950 aa8.37□□□□□ -1.07
ATXN3-223ENST00000553686 CACNA2D2Q9NY47 1150 aa8.37□□□□□ -1.07
ATXN3-223ENST00000553686 TRPM1Q7Z4N2 1603 aa8.36□□□□□ -1.07
ATXN3-223ENST00000553686 CICQ96RK0 1608 aaPredicted RBP8.36□□□□□ -1.07
ATXN3-223ENST00000553686 ADGRB1O14514 1584 aa8.36□□□□□ -1.07
ATXN3-223ENST00000553686 DYNC1LI2O43237 492 aaPredicted RBP8.36□□□□□ -1.07
ATXN3-223ENST00000553686 GRIK1P39086 918 aa8.36□□□□□ -1.07
ATXN3-223ENST00000553686 TMF1P82094 1093 aa8.36□□□□□ -1.07
ATXN3-223ENST00000553686 TTLL4Q14679 1199 aa8.36□□□□□ -1.07
ATXN3-223ENST00000553686 XP32Q5T750 250 aa8.36□□□□□ -1.07
ATXN3-223ENST00000553686 SMIM5Q71RC9 77 aa8.36□□□□□ -1.07
ATXN3-223ENST00000553686 TMC4Q7Z404 712 aa8.36□□□□□ -1.07
ATXN3-223ENST00000553686 SMYD4Q8IYR2 804 aaPredicted RBP8.36□□□□□ -1.07
ATXN3-223ENST00000553686 PCMTD2Q9NV79 361 aa8.36□□□□□ -1.07
ATXN3-223ENST00000553686 LEMD3Q9Y2U8 911 aa8.36□□□□□ -1.07
ATXN3-223ENST00000553686 CSADQ9Y600 493 aa8.36□□□□□ -1.07
ATXN3-223ENST00000553686 NSD2O96028 1365 aa8.35□□□□□ -1.07
ATXN3-223ENST00000553686 HCLS1P14317 486 aaPredicted RBP8.35□□□□□ -1.07
ATXN3-223ENST00000553686 LMNB1P20700 586 aa8.35□□□□□ -1.07
ATXN3-223ENST00000553686 INTS5Q6P9B9 1019 aaKnown RBP8.35□□□□□ -1.07
ATXN3-223ENST00000553686 SEZ6L2Q6UXD5 910 aa8.35□□□□□ -1.07
ATXN3-223ENST00000553686 SSU72Q9NP77 194 aaKnown RBP8.35□□□□□ -1.07
ATXN3-223ENST00000553686 C1GALT1Q9NS00 363 aa8.35□□□□□ -1.07
ATXN3-223ENST00000553686 QSER1Q2KHR3 1735 aa8.34□□□□□ -1.07
ATXN3-223ENST00000553686 FAM170BA6NMN3 283 aa8.34□□□□□ -1.07
ATXN3-223ENST00000553686 KCNA3P22001 575 aa8.34□□□□□ -1.07
ATXN3-223ENST00000553686 CD97P48960 835 aa8.34□□□□□ -1.07
ATXN3-223ENST00000553686 ERVK-24P63145 666 aa8.34□□□□□ -1.07
ATXN3-223ENST00000553686 TAF1CQ15572 869 aaPredicted RBP8.34□□□□□ -1.07
ATXN3-223ENST00000553686 MEI1Q5TIA1 1274 aa8.34□□□□□ -1.07
ATXN3-223ENST00000553686 DUSP27Q5VZP5 1158 aa8.34□□□□□ -1.07
ATXN3-223ENST00000553686 SCARA3Q6AZY7 606 aa8.34□□□□□ -1.07
ATXN3-223ENST00000553686 TTBK2Q6IQ55 1244 aa8.34□□□□□ -1.07
ATXN3-223ENST00000553686 C12orf40Q86WS4 652 aa8.34□□□□□ -1.07
ATXN3-223ENST00000553686 GATA6Q92908 595 aa8.34□□□□□ -1.07
ATXN3-223ENST00000553686 PCOLCE2Q9UKZ9 415 aa8.34□□□□□ -1.07
ATXN3-223ENST00000553686 PCDHA4Q9UN74 947 aa8.34□□□□□ -1.07
ATXN3-223ENST00000553686 PALLDQ8WX93 1383 aa8.34□□□□□ -1.07
ATXN3-223ENST00000553686 AKAP12Q02952 1782 aa8.33□□□□□ -1.08
ATXN3-223ENST00000553686 DCDC2CA8MYV0 355 aa8.33□□□□□ -1.08
ATXN3-223ENST00000553686 SORBS3O60504 671 aa8.33□□□□□ -1.08
ATXN3-223ENST00000553686 PTPN11Q06124 597 aaPredicted RBP8.33□□□□□ -1.08
ATXN3-223ENST00000553686 DEFB115Q30KQ5 88 aa8.33□□□□□ -1.08
ATXN3-223ENST00000553686 TMCO4Q5TGY1 634 aa8.33□□□□□ -1.08
ATXN3-223ENST00000553686 NBPF11Q86T75 865 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms