RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 TWISTNBQ3B726 338 aaPredicted RBP4.6□□□□□ -1.67
RDH11-204ENST00000553578 SULT6B1Q6IMI4 303 aa4.6□□□□□ -1.67
RDH11-204ENST00000553578 TMC7Q7Z402 723 aa4.6□□□□□ -1.67
RDH11-204ENST00000553578 TAX1BP1Q86VP1 789 aa4.6□□□□□ -1.67
RDH11-204ENST00000553578 MYLK4Q86YV6 388 aaPredicted RBP4.6□□□□□ -1.67
RDH11-204ENST00000553578 MIGA1Q8NAN2 632 aa4.6□□□□□ -1.67
RDH11-204ENST00000553578 TBC1D22AQ8WUA7 517 aa4.6□□□□□ -1.67
RDH11-204ENST00000553578 EIF2AK1Q9BQI3 630 aaKnown RBP4.6□□□□□ -1.67
RDH11-204ENST00000553578 SPATS2LQ9NUQ6 558 aaKnown RBP4.6□□□□□ -1.67
RDH11-204ENST00000553578 MRFAP1Q9Y605 127 aa4.6□□□□□ -1.67
RDH11-204ENST00000553578 SPINT1O43278 529 aa4.6□□□□□ -1.67
RDH11-204ENST00000553578 REC8O95072 547 aa4.6□□□□□ -1.67
RDH11-204ENST00000553578 MAPK9P45984 424 aa4.6□□□□□ -1.67
RDH11-204ENST00000553578 ZNF157P51786 506 aaPredicted RBP4.6□□□□□ -1.67
RDH11-204ENST00000553578 PAK2Q13177 524 aa4.6□□□□□ -1.67
RDH11-204ENST00000553578 C16orf87Q6PH81 154 aa4.6□□□□□ -1.67
RDH11-204ENST00000553578 BRINP3Q76B58 766 aa4.6□□□□□ -1.67
RDH11-204ENST00000553578 PCGF5Q86SE9 256 aa4.6□□□□□ -1.67
RDH11-204ENST00000553578 TSPYL6Q8N831 410 aa4.6□□□□□ -1.67
RDH11-204ENST00000553578 ABCF2Q9UG63 623 aa4.6□□□□□ -1.67
RDH11-204ENST00000553578 ADCY9O60503 1353 aa4.59□□□□□ -1.67
RDH11-204ENST00000553578 ICMTO60725 284 aa4.59□□□□□ -1.67
RDH11-204ENST00000553578 CYP2C19P33261 490 aa4.59□□□□□ -1.67
RDH11-204ENST00000553578 SCTRP47872 440 aa4.59□□□□□ -1.67
RDH11-204ENST00000553578 CCT4P50991 539 aaKnown RBP4.59□□□□□ -1.67
RDH11-204ENST00000553578 TBX4P57082 545 aa4.59□□□□□ -1.67
RDH11-204ENST00000553578 TRAF1Q13077 416 aa4.59□□□□□ -1.67
RDH11-204ENST00000553578 BIRC3Q13489 604 aa4.59□□□□□ -1.67
RDH11-204ENST00000553578 GBP6Q6ZN66 633 aa4.59□□□□□ -1.67
RDH11-204ENST00000553578 FMNL2Q96PY5 1086 aa4.59□□□□□ -1.67
RDH11-204ENST00000553578 IGFLR1Q9H665 355 aa4.59□□□□□ -1.67
RDH11-204ENST00000553578 CBX8Q9HC52 389 aa4.59□□□□□ -1.67
RDH11-204ENST00000553578 CTNNA3Q9UI47 895 aa4.59□□□□□ -1.67
RDH11-204ENST00000553578 LRRC37AA6NMS7 1700 aa4.59□□□□□ -1.67
RDH11-204ENST00000553578 WDR17Q8IZU2 1322 aa4.59□□□□□ -1.67
RDH11-204ENST00000553578 KATNA1O75449 491 aa4.59□□□□□ -1.67
RDH11-204ENST00000553578 GNRH1P01148 92 aa4.59□□□□□ -1.67
RDH11-204ENST00000553578 USP8P40818 1118 aa4.59□□□□□ -1.67
RDH11-204ENST00000553578 PEX19P40855 299 aa4.59□□□□□ -1.67
RDH11-204ENST00000553578 LRRC41Q15345 812 aa4.59□□□□□ -1.67
RDH11-204ENST00000553578 C11orf91Q3C1V1 193 aa4.59□□□□□ -1.67
RDH11-204ENST00000553578 PHTF2Q8N3S3 785 aa4.59□□□□□ -1.67
RDH11-204ENST00000553578 TMEM57Q8N5G2 664 aa4.59□□□□□ -1.67
RDH11-204ENST00000553578 SNX21Q969T3 373 aa4.59□□□□□ -1.67
RDH11-204ENST00000553578 ARPC5LQ9BPX5 153 aa4.59□□□□□ -1.67
RDH11-204ENST00000553578 TMEM165Q9HC07 324 aa4.59□□□□□ -1.67
RDH11-204ENST00000553578 DDX56Q9NY93 547 aaKnown RBP4.59□□□□□ -1.67
RDH11-204ENST00000553578 ZIM2Q9NZV7 527 aa4.59□□□□□ -1.67
RDH11-204ENST00000553578 SAP30BPQ9UHR5 308 aaKnown RBP4.59□□□□□ -1.67
RDH11-204ENST00000553578 MZF1P28698 734 aaPredicted RBP4.59□□□□□ -1.68
RDH11-204ENST00000553578 APOBRQ0VD83 1088 aa4.59□□□□□ -1.68
RDH11-204ENST00000553578 ZRSR1Q15695 479 aaKnown RBP4.59□□□□□ -1.68
RDH11-204ENST00000553578 CCDC85BQ15834 202 aaPredicted RBP4.59□□□□□ -1.68
RDH11-204ENST00000553578 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.59□□□□□ -1.68
RDH11-204ENST00000553578 KRT28Q7Z3Y7 464 aa4.59□□□□□ -1.68
RDH11-204ENST00000553578 C17orf53Q8N3J3 647 aaPredicted RBP4.59□□□□□ -1.68
RDH11-204ENST00000553578 KIF18AQ8NI77 898 aa4.59□□□□□ -1.68
RDH11-204ENST00000553578 SH3GL3Q99963 347 aa4.59□□□□□ -1.68
RDH11-204ENST00000553578 CRACR2AQ9BSW2 395 aa4.59□□□□□ -1.68
RDH11-204ENST00000553578 LCMT1Q9UIC8 334 aa4.59□□□□□ -1.68
RDH11-204ENST00000553578 FBXO9Q9UK97 447 aaPredicted RBP4.59□□□□□ -1.68
RDH11-204ENST00000553578 NUP98P52948 1817 aa4.59□□□□□ -1.68
RDH11-204ENST00000553578 A0A1W2PRU2 124 aa4.58□□□□□ -1.68
RDH11-204ENST00000553578 CFAP69A5D8W1 941 aa4.58□□□□□ -1.68
RDH11-204ENST00000553578 LCE2BO14633 110 aa4.58□□□□□ -1.68
RDH11-204ENST00000553578 RNMTO43148 476 aaKnown RBP4.58□□□□□ -1.68
RDH11-204ENST00000553578 XPOTO43592 962 aaKnown RBP4.58□□□□□ -1.68
RDH11-204ENST00000553578 PPFIA2O75334 1257 aa4.58□□□□□ -1.68
RDH11-204ENST00000553578 NEFHP12036 1026 aa4.58□□□□□ -1.68
RDH11-204ENST00000553578 SNRPBP14678 240 aaKnown RBP4.58□□□□□ -1.68
RDH11-204ENST00000553578 NEK4P51957 841 aa4.58□□□□□ -1.68
RDH11-204ENST00000553578 EHHADHQ08426 723 aa4.58□□□□□ -1.68
RDH11-204ENST00000553578 RABEP1Q15276 862 aa4.58□□□□□ -1.68
RDH11-204ENST00000553578 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.58□□□□□ -1.68
RDH11-204ENST00000553578 FAM47EQ6ZV65 393 aa4.58□□□□□ -1.68
RDH11-204ENST00000553578 TBC1D32Q96NH3 1257 aa4.58□□□□□ -1.68
RDH11-204ENST00000553578 ASB16Q96NS5 453 aa4.58□□□□□ -1.68
RDH11-204ENST00000553578 PAGR1Q9BTK6 254 aa4.58□□□□□ -1.68
RDH11-204ENST00000553578 RAB6BQ9NRW1 208 aa4.58□□□□□ -1.68
RDH11-204ENST00000553578 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.58□□□□□ -1.68
RDH11-204ENST00000553578 MORC2Q9Y6X9 1032 aaPredicted RBP4.58□□□□□ -1.68
RDH11-204ENST00000553578 RIC1Q4ADV7 1423 aa4.58□□□□□ -1.68
RDH11-204ENST00000553578 STAU1O95793 577 aaKnown RBP4.58□□□□□ -1.68
RDH11-204ENST00000553578 CDC25BP30305 580 aa4.58□□□□□ -1.68
RDH11-204ENST00000553578 GCKP35557 465 aa4.58□□□□□ -1.68
RDH11-204ENST00000553578 RWDD2BP57060 319 aa4.58□□□□□ -1.68
RDH11-204ENST00000553578 MMS22LQ6ZRQ5 1243 aa4.58□□□□□ -1.68
RDH11-204ENST00000553578 ZBTB46Q86UZ6 589 aa4.58□□□□□ -1.68
RDH11-204ENST00000553578 PNMA8AQ86V59 439 aaPredicted RBP4.58□□□□□ -1.68
RDH11-204ENST00000553578 PHC3Q8NDX5 983 aa4.58□□□□□ -1.68
RDH11-204ENST00000553578 PPM1EQ8WY54 764 aa4.58□□□□□ -1.68
RDH11-204ENST00000553578 GTF3C6Q969F1 213 aa4.58□□□□□ -1.68
RDH11-204ENST00000553578 DEPDC7Q96QD5 511 aa4.58□□□□□ -1.68
RDH11-204ENST00000553578 CDC5LQ99459 802 aaKnown RBP4.58□□□□□ -1.68
RDH11-204ENST00000553578 RRP7AQ9Y3A4 280 aaKnown RBP4.58□□□□□ -1.68
RDH11-204ENST00000553578 ERVV-2B6SEH9 535 aa4.58□□□□□ -1.68
RDH11-204ENST00000553578 SKILP12757 684 aa4.58□□□□□ -1.68
RDH11-204ENST00000553578 EIF4BP23588 611 aaKnown RBP4.58□□□□□ -1.68
RDH11-204ENST00000553578 COPB2P35606 906 aa4.58□□□□□ -1.68
RDH11-204ENST00000553578 GSCP56915 257 aaPredicted RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms