RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 DCP1AQ9NPI6 582 aaPredicted RBP14.18□□□□□ -0.14
SRP54-203ENST00000553544 ECHDC1Q9NTX5 307 aa14.18□□□□□ -0.14
SRP54-203ENST00000553544 SMCHD1A6NHR9 2005 aa14.18□□□□□ -0.14
SRP54-203ENST00000553544 VWA5AO00534 786 aa14.17□□□□□ -0.14
SRP54-203ENST00000553544 ADAMTS4O75173 837 aa14.17□□□□□ -0.14
SRP54-203ENST00000553544 CYP2D6P10635 497 aa14.17□□□□□ -0.14
SRP54-203ENST00000553544 AKR1B1P15121 316 aa14.17□□□□□ -0.14
SRP54-203ENST00000553544 MRPS5P82675 430 aaKnown RBP14.17□□□□□ -0.14
SRP54-203ENST00000553544 UBE3CQ15386 1083 aa14.17□□□□□ -0.14
SRP54-203ENST00000553544 SLFNL1Q499Z3 407 aa14.17□□□□□ -0.14
SRP54-203ENST00000553544 C16orf59Q7L2K0 433 aa14.17□□□□□ -0.14
SRP54-203ENST00000553544 TMEM199Q8N511 208 aa14.17□□□□□ -0.14
SRP54-203ENST00000553544 KLHDC9Q8NEP7 349 aa14.17□□□□□ -0.14
SRP54-203ENST00000553544 SDR42E1Q8WUS8 393 aa14.17□□□□□ -0.14
SRP54-203ENST00000553544 DYNLL2Q96FJ2 89 aa14.17□□□□□ -0.14
SRP54-203ENST00000553544 GLT1D1Q96MS3 346 aa14.17□□□□□ -0.14
SRP54-203ENST00000553544 CRBNQ96SW2 442 aa14.17□□□□□ -0.14
SRP54-203ENST00000553544 KANSL2Q9H9L4 492 aa14.17□□□□□ -0.14
SRP54-203ENST00000553544 ELP1O95163 1332 aa14.16□□□□□ -0.14
SRP54-203ENST00000553544 MROH7Q68CQ1 1323 aa14.16□□□□□ -0.14
SRP54-203ENST00000553544 ZNF236Q9UL36 1845 aa14.16□□□□□ -0.14
SRP54-203ENST00000553544 DUSP11O75319 330 aaKnown RBP14.16□□□□□ -0.14
SRP54-203ENST00000553544 CDK7P50613 346 aa14.16□□□□□ -0.14
SRP54-203ENST00000553544 TMEM240Q5SV17 173 aa14.16□□□□□ -0.14
SRP54-203ENST00000553544 LCORLQ8N3X6 602 aa14.16□□□□□ -0.14
SRP54-203ENST00000553544 PCSK9Q8NBP7 692 aaKnown RBP14.16□□□□□ -0.14
SRP54-203ENST00000553544 IL27Q8NEV9 243 aa14.16□□□□□ -0.14
SRP54-203ENST00000553544 DDX11Q96FC9 970 aa14.16□□□□□ -0.14
SRP54-203ENST00000553544 PBX4Q9BYU1 374 aa14.16□□□□□ -0.14
SRP54-203ENST00000553544 PRDM12Q9H4Q4 367 aa14.16□□□□□ -0.14
SRP54-203ENST00000553544 SPC25Q9HBM1 224 aa14.16□□□□□ -0.14
SRP54-203ENST00000553544 GOPCQ9HD26 462 aa14.16□□□□□ -0.14
SRP54-203ENST00000553544 ATP8A2Q9NTI2 1148 aa14.16□□□□□ -0.14
SRP54-203ENST00000553544 MSRAQ9UJ68 235 aa14.16□□□□□ -0.14
SRP54-203ENST00000553544 TBX21Q9UL17 535 aa14.16□□□□□ -0.14
SRP54-203ENST00000553544 GRXCR1A8MXD5 290 aa14.15□□□□□ -0.14
SRP54-203ENST00000553544 RAD21O60216 631 aa14.15□□□□□ -0.14
SRP54-203ENST00000553544 CHGBP05060 677 aa14.15□□□□□ -0.14
SRP54-203ENST00000553544 EEF2P13639 858 aaKnown RBP14.15□□□□□ -0.14
SRP54-203ENST00000553544 PBX2P40425 430 aa14.15□□□□□ -0.14
SRP54-203ENST00000553544 CDK8P49336 464 aa14.15□□□□□ -0.14
SRP54-203ENST00000553544 CCSAPQ6IQ19 270 aaPredicted RBP14.15□□□□□ -0.14
SRP54-203ENST00000553544 CLEC10AQ8IUN9 316 aa14.15□□□□□ -0.14
SRP54-203ENST00000553544 AMOTL1Q8IY63 956 aa14.15□□□□□ -0.14
SRP54-203ENST00000553544 ADAMTS19Q8TE59 1207 aa14.15□□□□□ -0.14
SRP54-203ENST00000553544 LENG1Q96BZ8 264 aaPredicted RBP14.15□□□□□ -0.14
SRP54-203ENST00000553544 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.15□□□□□ -0.142e-6■■■□□ 14.8
SRP54-203ENST00000553544 FBXO28Q9NVF7 368 aa14.15□□□□□ -0.14
SRP54-203ENST00000553544 THEGQ9P2T0 379 aa14.15□□□□□ -0.14
SRP54-203ENST00000553544 ZNF214Q9UL59 606 aaPredicted RBP14.15□□□□□ -0.14
SRP54-203ENST00000553544 PPP1R9AQ9ULJ8 1098 aa14.15□□□□□ -0.14
SRP54-203ENST00000553544 NCOR1O75376 2440 aa14.15□□□□□ -0.14
SRP54-203ENST00000553544 SYNGAP1Q96PV0 1343 aa14.15□□□□□ -0.15
SRP54-203ENST00000553544 SYNRGQ9UMZ2 1314 aa14.15□□□□□ -0.15
SRP54-203ENST00000553544 ROBO3Q96MS0 1386 aa14.14□□□□□ -0.15
SRP54-203ENST00000553544 SNAI1O95863 264 aaPredicted RBP14.14□□□□□ -0.15
SRP54-203ENST00000553544 CSF2RAP15509 400 aa14.14□□□□□ -0.15
SRP54-203ENST00000553544 IGFBP4P22692 258 aa14.14□□□□□ -0.15
SRP54-203ENST00000553544 RAB30Q15771 203 aa14.14□□□□□ -0.15
SRP54-203ENST00000553544 CCDC85BQ15834 202 aaPredicted RBP14.14□□□□□ -0.15
SRP54-203ENST00000553544 C12orf60Q5U649 245 aa14.14□□□□□ -0.15
SRP54-203ENST00000553544 RASIP1Q5U651 963 aa14.14□□□□□ -0.15
SRP54-203ENST00000553544 MAMDC4Q6UXC1 1216 aa14.14□□□□□ -0.15
SRP54-203ENST00000553544 ZNF365Q70YC5 407 aa14.14□□□□□ -0.15
SRP54-203ENST00000553544 TSPYL2Q9H2G4 693 aaPredicted RBP14.14□□□□□ -0.15
SRP54-203ENST00000553544 ARMT1Q9H993 441 aa14.14□□□□□ -0.15
SRP54-203ENST00000553544 ZHX1Q9UKY1 873 aaPredicted RBP14.14□□□□□ -0.15
SRP54-203ENST00000553544 MYO9BQ13459 2157 aa14.14□□□□□ -0.15
SRP54-203ENST00000553544 BDP1A6H8Y1 2624 aa14.13□□□□□ -0.15
SRP54-203ENST00000553544 ARVCFO00192 962 aa14.13□□□□□ -0.15
SRP54-203ENST00000553544 TLR3O15455 904 aaKnown RBP14.13□□□□□ -0.15
SRP54-203ENST00000553544 PRKAB2O43741 272 aa14.13□□□□□ -0.15
SRP54-203ENST00000553544 MBD4O95243 580 aa14.13□□□□□ -0.15
SRP54-203ENST00000553544 ASGR1P07306 291 aa14.13□□□□□ -0.15
SRP54-203ENST00000553544 C6orf222P0C671 652 aaPredicted RBP14.13□□□□□ -0.15
SRP54-203ENST00000553544 ACRP10323 421 aa14.13□□□□□ -0.15
SRP54-203ENST00000553544 CST5P28325 142 aaPredicted RBP14.13□□□□□ -0.15
SRP54-203ENST00000553544 ACVR2BQ13705 512 aa14.13□□□□□ -0.15
SRP54-203ENST00000553544 GNASQ5JWF2 1037 aa14.13□□□□□ -0.15
SRP54-203ENST00000553544 TSHZ3Q63HK5 1081 aa14.13□□□□□ -0.15
SRP54-203ENST00000553544 ZSCAN25Q6NSZ9 544 aa14.13□□□□□ -0.15
SRP54-203ENST00000553544 PSRC1Q6PGN9 363 aaPredicted RBP14.13□□□□□ -0.15
SRP54-203ENST00000553544 KBTBD3Q8NAB2 608 aa14.13□□□□□ -0.15
SRP54-203ENST00000553544 DDRGK1Q96HY6 314 aa14.13□□□□□ -0.15
SRP54-203ENST00000553544 GPATCH3Q96I76 525 aa14.13□□□□□ -0.15
SRP54-203ENST00000553544 UHRF1Q96T88 793 aaPredicted RBP14.13□□□□□ -0.15
SRP54-203ENST00000553544 TEX13BQ9BXU2 312 aa14.13□□□□□ -0.15
SRP54-203ENST00000553544 RAPGEFL1Q9UHV5 662 aa14.13□□□□□ -0.15
SRP54-203ENST00000553544 TTC41PQ6P2S7 1318 aa14.13□□□□□ -0.15
SRP54-203ENST00000553544 ZNFX1Q9P2E3 1918 aaKnown RBP14.12□□□□□ -0.15
SRP54-203ENST00000553544 A0A0U1RQG5 324 aaPredicted RBP14.12□□□□□ -0.15
SRP54-203ENST00000553544 USP17L12C9JPN9 530 aa14.12□□□□□ -0.15
SRP54-203ENST00000553544 USP17L21D6R901 530 aa14.12□□□□□ -0.15
SRP54-203ENST00000553544 FGBP02675 491 aa14.12□□□□□ -0.15
SRP54-203ENST00000553544 HDAC1Q13547 482 aaPredicted RBP14.12□□□□□ -0.15
SRP54-203ENST00000553544 AAMPQ13685 434 aa14.12□□□□□ -0.15
SRP54-203ENST00000553544 FAM83BQ5T0W9 1011 aa14.12□□□□□ -0.15
SRP54-203ENST00000553544 ZNF467Q7Z7K2 595 aaPredicted RBP14.12□□□□□ -0.15
SRP54-203ENST00000553544 PRPF38AQ8NAV1 312 aaKnown RBP14.12□□□□□ -0.15
SRP54-203ENST00000553544 REPS2Q8NFH8 660 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms