RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 TMEM132AQ24JP5 1023 aa9.05□□□□□ -0.96
ATXN3-219ENST00000553488 TDHQ8IZJ6 230 aa9.05□□□□□ -0.96
ATXN3-219ENST00000553488 OGDHLQ9ULD0 1010 aa9.05□□□□□ -0.96
ATXN3-219ENST00000553488 MROH7-TTC4A0A0A0MT08 1334 aa9.05□□□□□ -0.96
ATXN3-219ENST00000553488 RPTORQ8N122 1335 aa9.05□□□□□ -0.96
ATXN3-219ENST00000553488 COL6A1P12109 1028 aa9.04□□□□□ -0.96
ATXN3-219ENST00000553488 SYN1P17600 705 aa9.04□□□□□ -0.96
ATXN3-219ENST00000553488 GCLCP48506 637 aaPredicted RBP9.04□□□□□ -0.96
ATXN3-219ENST00000553488 PICALMQ13492 652 aa9.04□□□□□ -0.96
ATXN3-219ENST00000553488 RRP1BQ14684 758 aaKnown RBP9.04□□□□□ -0.96
ATXN3-219ENST00000553488 CCDC102BQ68D86 513 aa9.04□□□□□ -0.96
ATXN3-219ENST00000553488 ZSCAN29Q8IWY8 852 aaPredicted RBP9.04□□□□□ -0.96
ATXN3-219ENST00000553488 SSH1Q8WYL5 1049 aa9.04□□□□□ -0.96
ATXN3-219ENST00000553488 SIL1Q9H173 461 aa9.04□□□□□ -0.96
ATXN3-219ENST00000553488 C11orf49Q9H6J7 331 aa9.04□□□□□ -0.96
ATXN3-219ENST00000553488 GNL3LQ9NVN8 582 aaKnown RBP9.04□□□□□ -0.96
ATXN3-219ENST00000553488 PGPEP1Q9NXJ5 209 aa9.04□□□□□ -0.96
ATXN3-219ENST00000553488 MORF4L1Q9UBU8 362 aa9.04□□□□□ -0.96
ATXN3-219ENST00000553488 MYH1P12882 1939 aa9.03□□□□□ -0.96
ATXN3-219ENST00000553488 GPR75-ASB3A0A0A6YYF3 556 aa9.03□□□□□ -0.96
ATXN3-219ENST00000553488 ERVH48-1M5A8F1 160 aa9.03□□□□□ -0.96
ATXN3-219ENST00000553488 LILRA1O75019 489 aa9.03□□□□□ -0.96
ATXN3-219ENST00000553488 HMGCS2P54868 508 aa9.03□□□□□ -0.96
ATXN3-219ENST00000553488 MCCD1P59942 119 aaPredicted RBP9.03□□□□□ -0.96
ATXN3-219ENST00000553488 SPP2Q13103 211 aa9.03□□□□□ -0.96
ATXN3-219ENST00000553488 DZIP1Q86YF9 867 aaKnown RBP9.03□□□□□ -0.96
ATXN3-219ENST00000553488 LINC00528Q8N1L1 170 aa9.03□□□□□ -0.96
ATXN3-219ENST00000553488 ZGPATQ8N5A5 531 aaKnown RBP9.03□□□□□ -0.96
ATXN3-219ENST00000553488 ZNF280CQ8ND82 737 aa9.03□□□□□ -0.96
ATXN3-219ENST00000553488 PURBQ96QR8 312 aaKnown RBP9.03□□□□□ -0.96
ATXN3-219ENST00000553488 COL25A1Q9BXS0 654 aaPredicted RBP9.03□□□□□ -0.96
ATXN3-219ENST00000553488 OSBPL5Q9H0X9 879 aaPredicted RBP9.03□□□□□ -0.96
ATXN3-219ENST00000553488 ASCC2Q9H1I8 757 aaPredicted RBP9.03□□□□□ -0.96
ATXN3-219ENST00000553488 CEP126Q9P2H0 1117 aa9.03□□□□□ -0.96
ATXN3-219ENST00000553488 PA2G4Q9UQ80 394 aaKnown RBP9.03□□□□□ -0.96
ATXN3-219ENST00000553488 PEX10O60683 326 aa9.02□□□□□ -0.97
ATXN3-219ENST00000553488 IL15P40933 162 aaPredicted RBP9.02□□□□□ -0.97
ATXN3-219ENST00000553488 MECOMQ03112 1051 aa9.02□□□□□ -0.97
ATXN3-219ENST00000553488 CBLBQ13191 982 aa9.02□□□□□ -0.97
ATXN3-219ENST00000553488 GUCD1Q96NT3 240 aa9.02□□□□□ -0.97
ATXN3-219ENST00000553488 TXNRD2Q9NNW7 524 aa9.02□□□□□ -0.97
ATXN3-219ENST00000553488 COPRSQ9NQ92 184 aa9.02□□□□□ -0.97
ATXN3-219ENST00000553488 TMPRSS4Q9NRS4 437 aa9.02□□□□□ -0.97
ATXN3-219ENST00000553488 ZNF236Q9UL36 1845 aa9.02□□□□□ -0.97
ATXN3-219ENST00000553488 NCOR1O75376 2440 aa9.01□□□□□ -0.97
ATXN3-219ENST00000553488 A0A0G2JMZ2 1700 aa9.01□□□□□ -0.97
ATXN3-219ENST00000553488 XRCC5P13010 732 aaKnown RBP9.01□□□□□ -0.97
ATXN3-219ENST00000553488 CAP2P40123 477 aa9.01□□□□□ -0.97
ATXN3-219ENST00000553488 PABPC4Q13310 644 aaKnown RBP eCLIP9.01□□□□□ -0.97
ATXN3-219ENST00000553488 LRRC26Q2I0M4 334 aa9.01□□□□□ -0.97
ATXN3-219ENST00000553488 KDF1Q8NAX2 398 aaPredicted RBP9.01□□□□□ -0.97
ATXN3-219ENST00000553488 SOCS4Q8WXH5 440 aa9.01□□□□□ -0.97
ATXN3-219ENST00000553488 USP6NLQ92738 828 aa9.01□□□□□ -0.97
ATXN3-219ENST00000553488 UBE2OQ9C0C9 1292 aaKnown RBP9.01□□□□□ -0.97
ATXN3-219ENST00000553488 DNAJC18Q9H819 358 aa9.01□□□□□ -0.97
ATXN3-219ENST00000553488 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.01□□□□□ -0.97
ATXN3-219ENST00000553488 ABCF2Q9UG63 623 aa9.01□□□□□ -0.97
ATXN3-219ENST00000553488 PCDHB9Q9Y5E1 797 aa9.01□□□□□ -0.97
ATXN3-219ENST00000553488 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.01□□□□□ -0.97
ATXN3-219ENST00000553488 CHD9Q3L8U1 2897 aa9□□□□□ -0.97
ATXN3-219ENST00000553488 USP17L5A8MUK1 530 aa9□□□□□ -0.97
ATXN3-219ENST00000553488 UBTFL1P0CB47 393 aaPredicted RBP9□□□□□ -0.97
ATXN3-219ENST00000553488 CYP2B6P20813 491 aa9□□□□□ -0.97
ATXN3-219ENST00000553488 HOXA7P31268 230 aaPredicted RBP9□□□□□ -0.97
ATXN3-219ENST00000553488 ADD1P35611 737 aaKnown RBP9□□□□□ -0.97
ATXN3-219ENST00000553488 HERVK_113P62684 666 aa9□□□□□ -0.97
ATXN3-219ENST00000553488 JAG1P78504 1218 aa9□□□□□ -0.97
ATXN3-219ENST00000553488 CACNB2Q08289 660 aaPredicted RBP9□□□□□ -0.97
ATXN3-219ENST00000553488 NFX1Q12986 1120 aaKnown RBP9□□□□□ -0.97
ATXN3-219ENST00000553488 SPTY2D1Q68D10 685 aaPredicted RBP9□□□□□ -0.97
ATXN3-219ENST00000553488 PI16Q6UXB8 463 aa9□□□□□ -0.97
ATXN3-219ENST00000553488 PHF6Q8IWS0 365 aaKnown RBP eCLIP9□□□□□ -0.97
ATXN3-219ENST00000553488 NSUN4Q96CB9 384 aaKnown RBP9□□□□□ -0.97
ATXN3-219ENST00000553488 TSEN34Q9BSV6 310 aaKnown RBP9□□□□□ -0.97
ATXN3-219ENST00000553488 WDR18Q9BV38 432 aa9□□□□□ -0.97
ATXN3-219ENST00000553488 GDPD2Q9HCC8 539 aa9□□□□□ -0.97
ATXN3-219ENST00000553488 PARP14Q460N5 1801 aa9□□□□□ -0.97
ATXN3-219ENST00000553488 REV3LO60673 3130 aa9□□□□□ -0.97
ATXN3-219ENST00000553488 CHD7Q9P2D1 2997 aa9□□□□□ -0.97
ATXN3-219ENST00000553488 A0A1B0GUL7 405 aa8.99□□□□□ -0.97
ATXN3-219ENST00000553488 MAP4K4O95819 1239 aaPredicted RBP8.99□□□□□ -0.97
ATXN3-219ENST00000553488 ZKSCAN1P17029 563 aaPredicted RBP8.99□□□□□ -0.97
ATXN3-219ENST00000553488 CCND3P30281 292 aaPredicted RBP8.99□□□□□ -0.97
ATXN3-219ENST00000553488 BACE1P56817 501 aa8.99□□□□□ -0.97
ATXN3-219ENST00000553488 TIMM10P62072 90 aa8.99□□□□□ -0.97
ATXN3-219ENST00000553488 CCL14Q16627 93 aa8.99□□□□□ -0.97
ATXN3-219ENST00000553488 SHROOM1Q2M3G4 852 aaPredicted RBP8.99□□□□□ -0.97
ATXN3-219ENST00000553488 ALDH1L2Q3SY69 923 aa8.99□□□□□ -0.97
ATXN3-219ENST00000553488 FAM109BQ6ICB4 259 aaPredicted RBP8.99□□□□□ -0.97
ATXN3-219ENST00000553488 ERICH6Q7L0X2 663 aa8.99□□□□□ -0.97
ATXN3-219ENST00000553488 ZNF592Q92610 1267 aa8.99□□□□□ -0.97
ATXN3-219ENST00000553488 XAGE2Q96GT9 111 aa8.99□□□□□ -0.97
ATXN3-219ENST00000553488 P2RX7Q99572 595 aaKnown RBP8.99□□□□□ -0.97
ATXN3-219ENST00000553488 APBA2Q99767 749 aa8.99□□□□□ -0.97
ATXN3-219ENST00000553488 PORCNQ9H237 461 aa8.99□□□□□ -0.97
ATXN3-219ENST00000553488 HMG20BQ9P0W2 317 aa8.99□□□□□ -0.97
ATXN3-219ENST00000553488 HERC5Q9UII4 1024 aaKnown RBP8.99□□□□□ -0.97
ATXN3-219ENST00000553488 GTF3C3Q9Y5Q9 886 aa8.99□□□□□ -0.97
ATXN3-219ENST00000553488 SPINT1O43278 529 aa8.98□□□□□ -0.97
ATXN3-219ENST00000553488 ARID4AP29374 1257 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms