RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 PDIA3P30101 505 aaKnown RBP17.33■□□□□ 0.36
MTHFD1-204ENST00000553405 SLC16A2P36021 539 aa17.33■□□□□ 0.36
MTHFD1-204ENST00000553405 CAP1Q01518 475 aa17.33■□□□□ 0.36
MTHFD1-204ENST00000553405 CCDC96Q2M329 555 aa17.33■□□□□ 0.36
MTHFD1-204ENST00000553405 NOM1Q5C9Z4 860 aaKnown RBP17.33■□□□□ 0.36
MTHFD1-204ENST00000553405 NFXL1Q6ZNB6 911 aa17.33■□□□□ 0.36
MTHFD1-204ENST00000553405 MICU3Q86XE3 530 aa17.33■□□□□ 0.36
MTHFD1-204ENST00000553405 PRPF38AQ8NAV1 312 aaKnown RBP17.33■□□□□ 0.36
MTHFD1-204ENST00000553405 MTMR8Q96EF0 704 aa17.33■□□□□ 0.36
MTHFD1-204ENST00000553405 LARP6Q9BRS8 491 aaKnown RBP17.33■□□□□ 0.36
MTHFD1-204ENST00000553405 SLC38A10Q9HBR0 1119 aa17.33■□□□□ 0.36
MTHFD1-204ENST00000553405 ZFYVE28Q9HCC9 887 aa17.33■□□□□ 0.36
MTHFD1-204ENST00000553405 GPCPD1Q9NPB8 672 aa17.33■□□□□ 0.36
MTHFD1-204ENST00000553405 HOXC10Q9NYD6 342 aa17.33■□□□□ 0.36
MTHFD1-204ENST00000553405 BTBD7Q9P203 1132 aa17.33■□□□□ 0.36
MTHFD1-204ENST00000553405 PRR12Q9ULL5 1215 aa17.33■□□□□ 0.36
MTHFD1-204ENST00000553405 TPCN1Q9ULQ1 816 aa17.33■□□□□ 0.36
MTHFD1-204ENST00000553405 ZNF536O15090 1300 aa17.32■□□□□ 0.36
MTHFD1-204ENST00000553405 CD2BP2O95400 341 aaKnown RBP17.32■□□□□ 0.36
MTHFD1-204ENST00000553405 CDC27P30260 824 aa17.32■□□□□ 0.36
MTHFD1-204ENST00000553405 GCLCP48506 637 aaPredicted RBP17.32■□□□□ 0.36
MTHFD1-204ENST00000553405 FAM160B2Q86V87 743 aa17.32■□□□□ 0.36
MTHFD1-204ENST00000553405 FANCBQ8NB91 859 aa17.32■□□□□ 0.36
MTHFD1-204ENST00000553405 CHURC1Q8WUH1 139 aa17.32■□□□□ 0.36
MTHFD1-204ENST00000553405 ZNF274Q96GC6 653 aaPredicted RBP17.32■□□□□ 0.36
MTHFD1-204ENST00000553405 ZNF214Q9UL59 606 aaPredicted RBP17.32■□□□□ 0.36
MTHFD1-204ENST00000553405 GOLGA8BA8MQT2 603 aa17.31■□□□□ 0.36
MTHFD1-204ENST00000553405 KLRF2D3W0D1 207 aa17.31■□□□□ 0.36
MTHFD1-204ENST00000553405 ZBTB43O43298 467 aa17.31■□□□□ 0.36
MTHFD1-204ENST00000553405 PLEKHA8P1O95397 391 aa17.31■□□□□ 0.36
MTHFD1-204ENST00000553405 LARGE1O95461 756 aa17.31■□□□□ 0.36
MTHFD1-204ENST00000553405 CALM1P0DP23 149 aa17.31■□□□□ 0.36
MTHFD1-204ENST00000553405 CALM2P0DP24 149 aa17.31■□□□□ 0.36
MTHFD1-204ENST00000553405 CALM3P0DP25 149 aa17.31■□□□□ 0.36
MTHFD1-204ENST00000553405 ST3GAL1Q11201 340 aa17.31■□□□□ 0.36
MTHFD1-204ENST00000553405 TMEM132BQ14DG7 1078 aa17.31■□□□□ 0.36
MTHFD1-204ENST00000553405 Q3C1V9 767 aa17.31■□□□□ 0.36
MTHFD1-204ENST00000553405 SYDE2Q5VT97 1194 aa17.31■□□□□ 0.36
MTHFD1-204ENST00000553405 TMTC3Q6ZXV5 915 aa17.31■□□□□ 0.36
MTHFD1-204ENST00000553405 NUP133Q8WUM0 1156 aa17.31■□□□□ 0.36
MTHFD1-204ENST00000553405 UBA5Q9GZZ9 404 aa17.31■□□□□ 0.36
MTHFD1-204ENST00000553405 RANBP17Q9H2T7 1088 aaKnown RBP17.31■□□□□ 0.36
MTHFD1-204ENST00000553405 RIOX1Q9H6W3 641 aa17.31■□□□□ 0.36
MTHFD1-204ENST00000553405 JMJD4Q9H9V9 463 aa17.31■□□□□ 0.36
MTHFD1-204ENST00000553405 CPA4Q9UI42 421 aa17.31■□□□□ 0.36
MTHFD1-204ENST00000553405 RABGAP1Q9Y3P9 1069 aa17.31■□□□□ 0.36
MTHFD1-204ENST00000553405 HTTP42858 3142 aa17.31■□□□□ 0.36
MTHFD1-204ENST00000553405 ZSWIM8A7E2V4 1837 aa17.31■□□□□ 0.36
MTHFD1-204ENST00000553405 BAZ2BQ9UIF8 2168 aaKnown RBP17.3■□□□□ 0.36
MTHFD1-204ENST00000553405 ATP2A1O14983 1001 aa17.3■□□□□ 0.36
MTHFD1-204ENST00000553405 SMARCA1P28370 1054 aa17.3■□□□□ 0.36
MTHFD1-204ENST00000553405 NTRK3Q16288 839 aa17.3■□□□□ 0.36
MTHFD1-204ENST00000553405 ME3Q16798 604 aa17.3■□□□□ 0.36
MTHFD1-204ENST00000553405 FAM110CQ1W6H9 321 aa17.3■□□□□ 0.36
MTHFD1-204ENST00000553405 CCDC144CPQ8IYA2 1237 aa17.3■□□□□ 0.36
MTHFD1-204ENST00000553405 SRBD1Q8N5C6 995 aaKnown RBP17.3■□□□□ 0.36
MTHFD1-204ENST00000553405 MB21D1Q8N884 522 aa17.3■□□□□ 0.36
MTHFD1-204ENST00000553405 SMCR8Q8TEV9 937 aaPredicted RBP17.3■□□□□ 0.36
MTHFD1-204ENST00000553405 GTF3C2Q8WUA4 911 aaPredicted RBP17.3■□□□□ 0.36
MTHFD1-204ENST00000553405 KIFC2Q96AC6 838 aa17.3■□□□□ 0.36
MTHFD1-204ENST00000553405 SPZ1Q9BXG8 430 aa17.3■□□□□ 0.36
MTHFD1-204ENST00000553405 TSKSQ9UJT2 592 aa17.3■□□□□ 0.36
MTHFD1-204ENST00000553405 SMCHD1A6NHR9 2005 aa17.3■□□□□ 0.36
MTHFD1-204ENST00000553405 GPR25O00155 361 aa17.29■□□□□ 0.36
MTHFD1-204ENST00000553405 FOXN1O15353 648 aa17.29■□□□□ 0.36
MTHFD1-204ENST00000553405 PFKFB2O60825 505 aa17.29■□□□□ 0.36
MTHFD1-204ENST00000553405 CTGFP29279 349 aa17.29■□□□□ 0.36
MTHFD1-204ENST00000553405 ADD1P35611 737 aaKnown RBP17.29■□□□□ 0.36
MTHFD1-204ENST00000553405 ERVK-9P63128 1117 aa17.29■□□□□ 0.36
MTHFD1-204ENST00000553405 ERVK-24P63145 666 aa17.29■□□□□ 0.36
MTHFD1-204ENST00000553405 FGD1P98174 961 aa17.29■□□□□ 0.36
MTHFD1-204ENST00000553405 ANKRD1Q15327 319 aa17.29■□□□□ 0.36
MTHFD1-204ENST00000553405 ADGRF4Q8IZF3 695 aa17.29■□□□□ 0.36
MTHFD1-204ENST00000553405 ANKRD13CQ8N6S4 541 aa17.29■□□□□ 0.36
MTHFD1-204ENST00000553405 IL27Q8NEV9 243 aa17.29■□□□□ 0.36
MTHFD1-204ENST00000553405 CNTNAP5Q8WYK1 1306 aa17.28■□□□□ 0.36
MTHFD1-204ENST00000553405 GOLGA8AA7E2F4 631 aa17.28■□□□□ 0.36
MTHFD1-204ENST00000553405 HSPA1AP0DMV8 641 aaKnown RBP17.28■□□□□ 0.36
MTHFD1-204ENST00000553405 HSPA1BP0DMV9 641 aaKnown RBP17.28■□□□□ 0.36
MTHFD1-204ENST00000553405 FDX1P10109 184 aa17.28■□□□□ 0.36
MTHFD1-204ENST00000553405 HSPA8P11142 646 aaKnown RBP17.28■□□□□ 0.36
MTHFD1-204ENST00000553405 KIF5BP33176 963 aa17.28■□□□□ 0.36
MTHFD1-204ENST00000553405 SNAP25P60880 206 aa17.28■□□□□ 0.36
MTHFD1-204ENST00000553405 RTN1Q16799 776 aa17.28■□□□□ 0.36
MTHFD1-204ENST00000553405 CMTR1Q8N1G2 835 aaKnown RBP17.28■□□□□ 0.36
MTHFD1-204ENST00000553405 CTCFLQ8NI51 663 aaPredicted RBP17.28■□□□□ 0.36
MTHFD1-204ENST00000553405 NCOA5Q9HCD5 579 aaKnown RBP17.28■□□□□ 0.36
MTHFD1-204ENST00000553405 PPP1R11O60927 126 aaPredicted RBP17.27■□□□□ 0.36
MTHFD1-204ENST00000553405 TAL1P17542 331 aaPredicted RBP17.27■□□□□ 0.36
MTHFD1-204ENST00000553405 METAP2P50579 478 aaKnown RBP eCLIP17.27■□□□□ 0.36
MTHFD1-204ENST00000553405 OAZ1P54368 228 aa17.27■□□□□ 0.36
MTHFD1-204ENST00000553405 SCRN1Q12765 414 aa17.27■□□□□ 0.36
MTHFD1-204ENST00000553405 PPP2R5BQ15173 497 aa17.27■□□□□ 0.36
MTHFD1-204ENST00000553405 SYNE3Q6ZMZ3 975 aa17.27■□□□□ 0.36
MTHFD1-204ENST00000553405 GPRC5AQ8NFJ5 357 aa17.27■□□□□ 0.36
MTHFD1-204ENST00000553405 LZTS2Q9BRK4 669 aa17.27■□□□□ 0.36
MTHFD1-204ENST00000553405 MOV10L1Q9BXT6 1211 aaKnown RBP17.27■□□□□ 0.36
MTHFD1-204ENST00000553405 SPATC1LQ9H0A9 340 aa17.27■□□□□ 0.36
MTHFD1-204ENST00000553405 PORCNQ9H237 461 aa17.27■□□□□ 0.36
MTHFD1-204ENST00000553405 RBM28Q9NW13 759 aaKnown RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms