RNA–Protein interactions for RNA: ENST00000553283.1

CHD8-203, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 4

Gene CHD8, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-203ENST00000553283 TACC3Q9Y6A5 838 aa11.21□□□□□ -0.61
CHD8-203ENST00000553283 ROBO3Q96MS0 1386 aa11.2□□□□□ -0.62
CHD8-203ENST00000553283 DNAJC25-GNG10A0A024R161 153 aa11.2□□□□□ -0.62
CHD8-203ENST00000553283 PATL2C9JE40 543 aaKnown RBP11.2□□□□□ -0.62
CHD8-203ENST00000553283 GPAA1O43292 621 aa11.2□□□□□ -0.62
CHD8-203ENST00000553283 ZBED4O75132 1171 aa11.2□□□□□ -0.62
CHD8-203ENST00000553283 ADAMTS4O75173 837 aa11.2□□□□□ -0.62
CHD8-203ENST00000553283 SNAI1O95863 264 aaPredicted RBP11.2□□□□□ -0.62
CHD8-203ENST00000553283 APPP05067 770 aa11.2□□□□□ -0.62
CHD8-203ENST00000553283 CLTBP09497 229 aa11.2□□□□□ -0.62
CHD8-203ENST00000553283 ZNF697Q5TEC3 545 aa11.2□□□□□ -0.62
CHD8-203ENST00000553283 TSHZ3Q63HK5 1081 aa11.2□□□□□ -0.62
CHD8-203ENST00000553283 MAMDC4Q6UXC1 1216 aa11.2□□□□□ -0.62
CHD8-203ENST00000553283 FAM161BQ96MY7 647 aa11.2□□□□□ -0.62
CHD8-203ENST00000553283 EPB41L4AQ9HCS5 686 aaPredicted RBP11.2□□□□□ -0.62
CHD8-203ENST00000553283 MTMR4Q9NYA4 1195 aa11.2□□□□□ -0.62
CHD8-203ENST00000553283 FAM184BQ9ULE4 1060 aa11.2□□□□□ -0.62
CHD8-203ENST00000553283 SYNPO2Q9UMS6 1093 aa11.2□□□□□ -0.62
CHD8-203ENST00000553283 SYNGAP1Q96PV0 1343 aa11.19□□□□□ -0.62
CHD8-203ENST00000553283 A0A1W2PQ45 241 aaPredicted RBP11.19□□□□□ -0.62
CHD8-203ENST00000553283 A0A1W2PQY0 241 aa11.19□□□□□ -0.62
CHD8-203ENST00000553283 M0R2C6 588 aa11.19□□□□□ -0.62
CHD8-203ENST00000553283 KIAA0355O15063 1070 aa11.19□□□□□ -0.62
CHD8-203ENST00000553283 PRDM1O75626 825 aa11.19□□□□□ -0.62
CHD8-203ENST00000553283 ITGB8P26012 769 aa11.19□□□□□ -0.62
CHD8-203ENST00000553283 SLC4A3P48751 1232 aa11.19□□□□□ -0.62
CHD8-203ENST00000553283 TDO2P48775 406 aa11.19□□□□□ -0.62
CHD8-203ENST00000553283 SMAD3P84022 425 aaKnown RBP11.19□□□□□ -0.62
CHD8-203ENST00000553283 LRRFIP1Q32MZ4 808 aaKnown RBP11.19□□□□□ -0.62
CHD8-203ENST00000553283 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.19□□□□□ -0.62
CHD8-203ENST00000553283 ZNF467Q7Z7K2 595 aaPredicted RBP11.19□□□□□ -0.62
CHD8-203ENST00000553283 IFNL3Q8IZI9 196 aa11.19□□□□□ -0.62
CHD8-203ENST00000553283 CPXCR1Q8N123 301 aa11.19□□□□□ -0.62
CHD8-203ENST00000553283 KLHDC9Q8NEP7 349 aa11.19□□□□□ -0.62
CHD8-203ENST00000553283 KIFC2Q96AC6 838 aa11.19□□□□□ -0.62
CHD8-203ENST00000553283 LENG1Q96BZ8 264 aaPredicted RBP11.19□□□□□ -0.62
CHD8-203ENST00000553283 CEP95Q96GE4 821 aa11.19□□□□□ -0.62
CHD8-203ENST00000553283 TOX2Q96NM4 488 aa11.19□□□□□ -0.62
CHD8-203ENST00000553283 SEMA6BQ9H3T3 888 aa11.19□□□□□ -0.62
CHD8-203ENST00000553283 SLC38A10Q9HBR0 1119 aa11.19□□□□□ -0.62
CHD8-203ENST00000553283 RAVER2Q9HCJ3 691 aaKnown RBP11.19□□□□□ -0.62
CHD8-203ENST00000553283 FEM1BQ9UK73 627 aa11.19□□□□□ -0.62
CHD8-203ENST00000553283 CTDP1Q9Y5B0 961 aaPredicted RBP11.19□□□□□ -0.62
CHD8-203ENST00000553283 SMCHD1A6NHR9 2005 aa11.19□□□□□ -0.62
CHD8-203ENST00000553283 ZNFX1Q9P2E3 1918 aaKnown RBP11.19□□□□□ -0.62
CHD8-203ENST00000553283 MYH8P13535 1937 aa11.18□□□□□ -0.62
CHD8-203ENST00000553283 PQBP1O60828 265 aaKnown RBP11.18□□□□□ -0.62
CHD8-203ENST00000553283 TTLL1O95922 423 aa11.18□□□□□ -0.62
CHD8-203ENST00000553283 ACLYP53396 1101 aa11.18□□□□□ -0.62
CHD8-203ENST00000553283 OAZ1P54368 228 aa11.18□□□□□ -0.62
CHD8-203ENST00000553283 KCNA10Q16322 511 aa11.18□□□□□ -0.62
CHD8-203ENST00000553283 CCSAPQ6IQ19 270 aaPredicted RBP11.18□□□□□ -0.62
CHD8-203ENST00000553283 ANKRD33Q7Z3H0 272 aa11.18□□□□□ -0.62
CHD8-203ENST00000553283 GMCL1P1Q8NEA9 526 aa11.18□□□□□ -0.62
CHD8-203ENST00000553283 CHST13Q8NET6 341 aa11.18□□□□□ -0.62
CHD8-203ENST00000553283 NEDD1Q8NHV4 660 aa11.18□□□□□ -0.62
CHD8-203ENST00000553283 NUP133Q8WUM0 1156 aa11.18□□□□□ -0.62
CHD8-203ENST00000553283 CDX2Q99626 313 aaPredicted RBP11.18□□□□□ -0.62
CHD8-203ENST00000553283 NACAP1Q9BZK3 213 aa11.18□□□□□ -0.62
CHD8-203ENST00000553283 TMEM39AQ9NV64 488 aa11.18□□□□□ -0.62
CHD8-203ENST00000553283 FBXO40Q9UH90 709 aa11.18□□□□□ -0.62
CHD8-203ENST00000553283 ZHX1Q9UKY1 873 aaPredicted RBP11.18□□□□□ -0.62
CHD8-203ENST00000553283 TTC41PQ6P2S7 1318 aa11.17□□□□□ -0.62
CHD8-203ENST00000553283 SYNRGQ9UMZ2 1314 aa11.17□□□□□ -0.62
CHD8-203ENST00000553283 PARP14Q460N5 1801 aa11.17□□□□□ -0.62
CHD8-203ENST00000553283 MOXD2PA6NHM9 499 aa11.17□□□□□ -0.62
CHD8-203ENST00000553283 DCDC2CA8MYV0 355 aa11.17□□□□□ -0.62
CHD8-203ENST00000553283 DUSP11O75319 330 aaKnown RBP11.17□□□□□ -0.62
CHD8-203ENST00000553283 FDX1P10109 184 aa11.17□□□□□ -0.62
CHD8-203ENST00000553283 BMP3P12645 472 aa11.17□□□□□ -0.62
CHD8-203ENST00000553283 RAG1P15918 1043 aa11.17□□□□□ -0.62
CHD8-203ENST00000553283 EPHB4P54760 987 aa11.17□□□□□ -0.62
CHD8-203ENST00000553283 PDE4BQ07343 736 aa11.17□□□□□ -0.62
CHD8-203ENST00000553283 FAAP100Q0VG06 881 aa11.17□□□□□ -0.62
CHD8-203ENST00000553283 ACVR2BQ13705 512 aa11.17□□□□□ -0.62
CHD8-203ENST00000553283 SLFN13Q68D06 897 aa11.17□□□□□ -0.62
CHD8-203ENST00000553283 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.17□□□□□ -0.62
CHD8-203ENST00000553283 ANKRD35Q8N283 1001 aa11.17□□□□□ -0.62
CHD8-203ENST00000553283 SEC62Q99442 399 aaKnown RBP11.17□□□□□ -0.62
CHD8-203ENST00000553283 ABHD16BQ9H3Z7 469 aa11.17□□□□□ -0.62
CHD8-203ENST00000553283 STARD7Q9NQZ5 370 aa11.17□□□□□ -0.62
CHD8-203ENST00000553283 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.17□□□□□ -0.62
CHD8-203ENST00000553283 ELP1O95163 1332 aa11.16□□□□□ -0.62
CHD8-203ENST00000553283 TMEM232C9JQI7 657 aa11.16□□□□□ -0.62
CHD8-203ENST00000553283 ERC2O15083 957 aa11.16□□□□□ -0.62
CHD8-203ENST00000553283 SLC3A2P08195 630 aaKnown RBP11.16□□□□□ -0.62
CHD8-203ENST00000553283 TSPY3P0CV98 308 aa11.16□□□□□ -0.62
CHD8-203ENST00000553283 TSPY8P0CW00 308 aa11.16□□□□□ -0.62
CHD8-203ENST00000553283 CST5P28325 142 aaPredicted RBP11.16□□□□□ -0.62
CHD8-203ENST00000553283 TFAP4Q01664 338 aa11.16□□□□□ -0.62
CHD8-203ENST00000553283 FPGSQ05932 587 aa11.16□□□□□ -0.62
CHD8-203ENST00000553283 LRRC47Q8N1G4 583 aaKnown RBP11.16□□□□□ -0.62
CHD8-203ENST00000553283 PCSK9Q8NBP7 692 aaKnown RBP11.16□□□□□ -0.62
CHD8-203ENST00000553283 RNPC3Q96LT9 517 aaKnown RBP11.16□□□□□ -0.62
CHD8-203ENST00000553283 FGD4Q96M96 766 aa11.16□□□□□ -0.62
CHD8-203ENST00000553283 TTYH1Q9H313 450 aaPredicted RBP11.16□□□□□ -0.62
CHD8-203ENST00000553283 LTBP2Q14767 1821 aa11.16□□□□□ -0.62
CHD8-203ENST00000553283 LAMA2P24043 3122 aaKnown RBP11.15□□□□□ -0.62
CHD8-203ENST00000553283 MYH7P12883 1935 aa11.15□□□□□ -0.62
CHD8-203ENST00000553283 GREB1LQ9C091 1923 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms