RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 MAML3Q96JK9 1138 aa18.84■□□□□ 0.61
CDK4-215ENST00000553237 OSBPL3Q9H4L5 887 aa18.84■□□□□ 0.61
CDK4-215ENST00000553237 IL17RBQ9NRM6 502 aa18.84■□□□□ 0.61
CDK4-215ENST00000553237 TOMM22Q9NS69 142 aa18.84■□□□□ 0.61
CDK4-215ENST00000553237 FEM1BQ9UK73 627 aa18.84■□□□□ 0.61
CDK4-215ENST00000553237 STX8Q9UNK0 236 aa18.84■□□□□ 0.61
CDK4-215ENST00000553237 RIPK3Q9Y572 518 aa18.84■□□□□ 0.61
CDK4-215ENST00000553237 COL11A1P12107 1806 aaPredicted RBP18.84■□□□□ 0.61
CDK4-215ENST00000553237 PFASO15067 1338 aa18.83■□□□□ 0.61
CDK4-215ENST00000553237 BMP3P12645 472 aa18.83■□□□□ 0.6
CDK4-215ENST00000553237 HAND2P61296 217 aa18.83■□□□□ 0.6
CDK4-215ENST00000553237 RRP12Q5JTH9 1297 aaKnown RBP18.83■□□□□ 0.6
CDK4-215ENST00000553237 ANO1Q5XXA6 986 aa18.83■□□□□ 0.6
CDK4-215ENST00000553237 TICAM2Q86XR7 235 aa18.83■□□□□ 0.6
CDK4-215ENST00000553237 TEX13BQ9BXU2 312 aa18.83■□□□□ 0.6
CDK4-215ENST00000553237 RAVER2Q9HCJ3 691 aaKnown RBP18.83■□□□□ 0.6
CDK4-215ENST00000553237 SYNPO2Q9UMS6 1093 aa18.83■□□□□ 0.6
CDK4-215ENST00000553237 MYH4Q9Y623 1939 aa18.82■□□□□ 0.6
CDK4-215ENST00000553237 CCDC171Q6TFL3 1326 aa18.82■□□□□ 0.6
CDK4-215ENST00000553237 TMEM232C9JQI7 657 aa18.82■□□□□ 0.6
CDK4-215ENST00000553237 MCCP23508 829 aa18.82■□□□□ 0.6
CDK4-215ENST00000553237 COPB2P35606 906 aa18.82■□□□□ 0.6
CDK4-215ENST00000553237 RBM27Q9P2N5 1060 aaKnown RBP18.82■□□□□ 0.6
CDK4-215ENST00000553237 MTMR7Q9Y216 660 aa18.82■□□□□ 0.6
CDK4-215ENST00000553237 ZNF236Q9UL36 1845 aa18.81■□□□□ 0.6
CDK4-215ENST00000553237 ORC4O43929 436 aa18.81■□□□□ 0.6
CDK4-215ENST00000553237 MSCO60682 206 aa18.81■□□□□ 0.6
CDK4-215ENST00000553237 COL6A1P12109 1028 aa18.81■□□□□ 0.6
CDK4-215ENST00000553237 SLC1A4P43007 532 aa18.81■□□□□ 0.6
CDK4-215ENST00000553237 IKQ13123 557 aaPredicted RBP18.81■□□□□ 0.6
CDK4-215ENST00000553237 ZNF792Q3KQV3 632 aa18.81■□□□□ 0.6
CDK4-215ENST00000553237 SLC38A10Q9HBR0 1119 aa18.81■□□□□ 0.6
CDK4-215ENST00000553237 ZMYND8Q9ULU4 1186 aaPredicted RBP18.81■□□□□ 0.6
CDK4-215ENST00000553237 FGRP09769 529 aa18.8■□□□□ 0.6
CDK4-215ENST00000553237 PPP4R3BQ5MIZ7 849 aa18.8■□□□□ 0.6
CDK4-215ENST00000553237 CWC27Q6UX04 472 aaKnown RBP18.8■□□□□ 0.6
CDK4-215ENST00000553237 KCTD1Q719H9 257 aa18.8■□□□□ 0.6
CDK4-215ENST00000553237 DDX11Q96FC9 970 aa18.8■□□□□ 0.6
CDK4-215ENST00000553237 GMCL1Q96IK5 515 aa18.8■□□□□ 0.6
CDK4-215ENST00000553237 SENP6Q9GZR1 1112 aaPredicted RBP18.8■□□□□ 0.6
CDK4-215ENST00000553237 DIAPH3Q9NSV4 1193 aa18.8■□□□□ 0.6
CDK4-215ENST00000553237 ATP2A1O14983 1001 aa18.79■□□□□ 0.6
CDK4-215ENST00000553237 SEPT4O43236 478 aa18.79■□□□□ 0.6
CDK4-215ENST00000553237 MYCNP04198 464 aaPredicted RBP18.79■□□□□ 0.6
CDK4-215ENST00000553237 STAT2P52630 851 aa18.79■□□□□ 0.6
CDK4-215ENST00000553237 RASGRP2Q7LDG7 609 aa18.79■□□□□ 0.6
CDK4-215ENST00000553237 CHURC1Q8WUH1 139 aa18.79■□□□□ 0.6
CDK4-215ENST00000553237 STAG1Q8WVM7 1258 aa18.79■□□□□ 0.6
CDK4-215ENST00000553237 TINF2Q9BSI4 451 aa18.79■□□□□ 0.6
CDK4-215ENST00000553237 DIS3Q9Y2L1 958 aaKnown RBP18.79■□□□□ 0.6
CDK4-215ENST00000553237 TRIOBPQ9H2D6 2365 aa18.79■□□□□ 0.6
CDK4-215ENST00000553237 ALPK3Q96L96 1907 aa18.78■□□□□ 0.6
CDK4-215ENST00000553237 ZNFX1Q9P2E3 1918 aaKnown RBP18.78■□□□□ 0.6
CDK4-215ENST00000553237 SYN1P17600 705 aa18.78■□□□□ 0.6
CDK4-215ENST00000553237 PDE4AP27815 886 aa18.78■□□□□ 0.6
CDK4-215ENST00000553237 FXR1P51114 621 aaKnown RBP eCLIP18.78■□□□□ 0.6
CDK4-215ENST00000553237 MFAP1P55081 439 aaKnown RBP18.78■□□□□ 0.6
CDK4-215ENST00000553237 LRRC26Q2I0M4 334 aa18.78■□□□□ 0.6
CDK4-215ENST00000553237 GJC2Q5T442 439 aaPredicted RBP18.78■□□□□ 0.6
CDK4-215ENST00000553237 RCSD1Q6JBY9 416 aa18.78■□□□□ 0.6
CDK4-215ENST00000553237 FAM160B2Q86V87 743 aa18.78■□□□□ 0.6
CDK4-215ENST00000553237 HOMER2Q9NSB8 354 aa18.78■□□□□ 0.6
CDK4-215ENST00000553237 PCDH10Q9P2E7 1040 aa18.78■□□□□ 0.6
CDK4-215ENST00000553237 ZMYM6O95789 1325 aa18.77■□□□□ 0.6
CDK4-215ENST00000553237 TAL1P17542 331 aaPredicted RBP18.77■□□□□ 0.6
CDK4-215ENST00000553237 ATN1P54259 1190 aaPredicted RBP18.77■□□□□ 0.6
CDK4-215ENST00000553237 SNAP25P60880 206 aa18.77■□□□□ 0.6
CDK4-215ENST00000553237 AKNAD1Q5T1N1 836 aa18.77■□□□□ 0.6
CDK4-215ENST00000553237 MFSD6Q6ZSS7 791 aa18.77■□□□□ 0.6
CDK4-215ENST00000553237 TBC1D10CQ8IV04 446 aa18.77■□□□□ 0.6
CDK4-215ENST00000553237 DNM1LO00429 736 aa18.76■□□□□ 0.59
CDK4-215ENST00000553237 NOVP48745 357 aa18.76■□□□□ 0.59
CDK4-215ENST00000553237 OAZ1P54368 228 aa18.76■□□□□ 0.59
CDK4-215ENST00000553237 CCDC96Q2M329 555 aa18.76■□□□□ 0.59
CDK4-215ENST00000553237 ANKRD35Q8N283 1001 aa18.76■□□□□ 0.59
CDK4-215ENST00000553237 ARRDC4Q8NCT1 418 aa18.76■□□□□ 0.59
CDK4-215ENST00000553237 AGBL1Q96MI9 1066 aa18.76■□□□□ 0.59
CDK4-215ENST00000553237 PRO3102Q9H379 93 aa18.76■□□□□ 0.59
CDK4-215ENST00000553237 DNAJC25-GNG10A0A024R161 153 aa18.75■□□□□ 0.59
CDK4-215ENST00000553237 HIP1O00291 1037 aa18.75■□□□□ 0.59
CDK4-215ENST00000553237 FDX1P10109 184 aa18.75■□□□□ 0.59
CDK4-215ENST00000553237 TOP1P11387 765 aaKnown RBP18.75■□□□□ 0.59
CDK4-215ENST00000553237 CCDC174Q6PII3 467 aa18.75■□□□□ 0.59
CDK4-215ENST00000553237 CHST13Q8NET6 341 aa18.75■□□□□ 0.59
CDK4-215ENST00000553237 TMEM47Q9BQJ4 181 aa18.75■□□□□ 0.59
CDK4-215ENST00000553237 FBXO40Q9UH90 709 aa18.75■□□□□ 0.59
CDK4-215ENST00000553237 PRR12Q9ULL5 1215 aa18.75■□□□□ 0.59
CDK4-215ENST00000553237 ZNF536O15090 1300 aa18.74■□□□□ 0.59
CDK4-215ENST00000553237 ZNF213O14771 459 aa18.74■□□□□ 0.59
CDK4-215ENST00000553237 PLA2G6O60733 806 aa18.74■□□□□ 0.59
CDK4-215ENST00000553237 ZNF865P0CJ78 1059 aaPredicted RBP18.74■□□□□ 0.59
CDK4-215ENST00000553237 TTBK2Q6IQ55 1244 aa18.74■□□□□ 0.59
CDK4-215ENST00000553237 DCAF4Q8WV16 495 aa18.74■□□□□ 0.59
CDK4-215ENST00000553237 TCP11L1Q9NUJ3 509 aa18.74■□□□□ 0.59
CDK4-215ENST00000553237 NRBP1Q9UHY1 535 aa18.74■□□□□ 0.59
CDK4-215ENST00000553237 CNPY2Q9Y2B0 182 aa18.74■□□□□ 0.59
CDK4-215ENST00000553237 FRMPD3Q5JV73 1810 aa18.74■□□□□ 0.59
CDK4-215ENST00000553237 KBTBD13C9JR72 458 aa18.73■□□□□ 0.59
CDK4-215ENST00000553237 SNAI1O95863 264 aaPredicted RBP18.73■□□□□ 0.59
CDK4-215ENST00000553237 RARBP10826 455 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms